RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 NOTCH2Q04721 2471 aa6.76□□□□□ -1.33
NEDD9-202ENST00000379446 ARL5CA6NH57 179 aa6.76□□□□□ -1.33
NEDD9-202ENST00000379446 IGSF6O95976 241 aa6.76□□□□□ -1.33
NEDD9-202ENST00000379446 SLC9A1P19634 815 aa6.76□□□□□ -1.33
NEDD9-202ENST00000379446 ALDH4A1P30038 563 aa6.76□□□□□ -1.33
NEDD9-202ENST00000379446 SLC8A1P32418 973 aa6.76□□□□□ -1.33
NEDD9-202ENST00000379446 RFX3P48380 749 aa6.76□□□□□ -1.33
NEDD9-202ENST00000379446 TAF10Q12962 218 aa6.76□□□□□ -1.33
NEDD9-202ENST00000379446 PEX6Q13608 980 aa6.76□□□□□ -1.33
NEDD9-202ENST00000379446 SETMARQ53H47 684 aaPredicted RBP6.76□□□□□ -1.33
NEDD9-202ENST00000379446 SWT1Q5T5J6 900 aaKnown RBP6.76□□□□□ -1.33
NEDD9-202ENST00000379446 NUGGCQ68CJ6 796 aa6.76□□□□□ -1.33
NEDD9-202ENST00000379446 EMBQ6PCB8 327 aa6.76□□□□□ -1.33
NEDD9-202ENST00000379446 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.76□□□□□ -1.33
NEDD9-202ENST00000379446 SDCCAG8Q86SQ7 713 aaPredicted RBP6.76□□□□□ -1.33
NEDD9-202ENST00000379446 CMTR2Q8IYT2 770 aaKnown RBP6.76□□□□□ -1.33
NEDD9-202ENST00000379446 AFAP1L2Q8N4X5 818 aa6.76□□□□□ -1.33
NEDD9-202ENST00000379446 SH3RF2Q8TEC5 729 aa6.76□□□□□ -1.33
NEDD9-202ENST00000379446 ATP2A3Q93084 1043 aa6.76□□□□□ -1.33
NEDD9-202ENST00000379446 INPP4AQ96PE3 977 aaPredicted RBP6.76□□□□□ -1.33
NEDD9-202ENST00000379446 ZIM3Q96PE6 472 aa6.76□□□□□ -1.33
NEDD9-202ENST00000379446 SPATA16Q9BXB7 569 aa6.76□□□□□ -1.33
NEDD9-202ENST00000379446 BTBD1Q9H0C5 482 aa6.76□□□□□ -1.33
NEDD9-202ENST00000379446 MLXIPLQ9NP71 852 aa6.76□□□□□ -1.33
NEDD9-202ENST00000379446 SLC13A4Q9UKG4 626 aa6.76□□□□□ -1.33
NEDD9-202ENST00000379446 PLAAQ9Y263 795 aa6.76□□□□□ -1.33
NEDD9-202ENST00000379446 ZMYM2Q9UBW7 1377 aa6.76□□□□□ -1.33
NEDD9-202ENST00000379446 A0A087X0T9 212 aa6.76□□□□□ -1.33
NEDD9-202ENST00000379446 GRM6O15303 877 aa6.76□□□□□ -1.33
NEDD9-202ENST00000379446 GFRA3O60609 400 aa6.76□□□□□ -1.33
NEDD9-202ENST00000379446 DCNP07585 359 aaKnown RBP6.76□□□□□ -1.33
NEDD9-202ENST00000379446 FAM228BP0C875 321 aa6.76□□□□□ -1.33
NEDD9-202ENST00000379446 ITGB5P18084 799 aa6.76□□□□□ -1.33
NEDD9-202ENST00000379446 SDHBP21912 280 aa6.76□□□□□ -1.33
NEDD9-202ENST00000379446 SLCO1A2P46721 670 aa6.76□□□□□ -1.33
NEDD9-202ENST00000379446 MYL6P60660 151 aa6.76□□□□□ -1.33
NEDD9-202ENST00000379446 TEAD2Q15562 447 aa6.76□□□□□ -1.33
NEDD9-202ENST00000379446 MEA1Q16626 185 aa6.76□□□□□ -1.33
NEDD9-202ENST00000379446 LGSNQ5TDP6 509 aa6.76□□□□□ -1.33
NEDD9-202ENST00000379446 ALS2CLQ60I27 953 aa6.76□□□□□ -1.33
NEDD9-202ENST00000379446 CENPPQ6IPU0 288 aa6.76□□□□□ -1.33
NEDD9-202ENST00000379446 CYB5D1Q6P9G0 228 aa6.76□□□□□ -1.33
NEDD9-202ENST00000379446 SLC25A41Q8N5S1 370 aa6.76□□□□□ -1.33
NEDD9-202ENST00000379446 TSEN2Q8NCE0 465 aaKnown RBP6.76□□□□□ -1.33
NEDD9-202ENST00000379446 DAGLBQ8NCG7 672 aa6.76□□□□□ -1.33
NEDD9-202ENST00000379446 ADAM32Q8TC27 787 aa6.76□□□□□ -1.33
NEDD9-202ENST00000379446 STAMBPL1Q96FJ0 436 aa6.76□□□□□ -1.33
NEDD9-202ENST00000379446 POLR3CQ9BUI4 534 aaPredicted RBP6.76□□□□□ -1.33
NEDD9-202ENST00000379446 VIPAS39Q9H9C1 493 aa6.76□□□□□ -1.33
NEDD9-202ENST00000379446 ZNHIT2Q9UHR6 403 aa6.76□□□□□ -1.33
NEDD9-202ENST00000379446 NID2Q14112 1375 aa6.76□□□□□ -1.33
NEDD9-202ENST00000379446 COL16A1Q07092 1604 aaPredicted RBP6.76□□□□□ -1.33
NEDD9-202ENST00000379446 MAFO75444 373 aaPredicted RBP6.75□□□□□ -1.33
NEDD9-202ENST00000379446 SLC11A1P49279 550 aa6.75□□□□□ -1.33
NEDD9-202ENST00000379446 BCAT1P54687 386 aa6.75□□□□□ -1.33
NEDD9-202ENST00000379446 ARHGAP1Q07960 439 aa6.75□□□□□ -1.33
NEDD9-202ENST00000379446 TFDP2Q14188 446 aa6.75□□□□□ -1.33
NEDD9-202ENST00000379446 ZRANB3Q5FWF4 1079 aa6.75□□□□□ -1.33
NEDD9-202ENST00000379446 NIPA1Q7RTP0 329 aa6.75□□□□□ -1.33
NEDD9-202ENST00000379446 DNAJB7Q7Z6W7 309 aaPredicted RBP6.75□□□□□ -1.33
NEDD9-202ENST00000379446 CREG2Q8IUH2 290 aa6.75□□□□□ -1.33
NEDD9-202ENST00000379446 EGFL6Q8IUX8 553 aa6.75□□□□□ -1.33
NEDD9-202ENST00000379446 NUP93Q8N1F7 819 aa6.75□□□□□ -1.33
NEDD9-202ENST00000379446 CAMKK1Q8N5S9 505 aa6.75□□□□□ -1.33
NEDD9-202ENST00000379446 CELF5Q8N6W0 485 aaKnown RBP6.75□□□□□ -1.33
NEDD9-202ENST00000379446 ANKRD42Q8N9B4 389 aa6.75□□□□□ -1.33
NEDD9-202ENST00000379446 OR10G6Q8NH81 332 aa6.75□□□□□ -1.33
NEDD9-202ENST00000379446 MAIP1Q8WWC4 291 aa6.75□□□□□ -1.33
NEDD9-202ENST00000379446 CDKL2Q92772 493 aa6.75□□□□□ -1.33
NEDD9-202ENST00000379446 USP13Q92995 863 aaPredicted RBP6.75□□□□□ -1.33
NEDD9-202ENST00000379446 HVCN1Q96D96 273 aa6.75□□□□□ -1.33
NEDD9-202ENST00000379446 P2RY13Q9BPV8 354 aa6.75□□□□□ -1.33
NEDD9-202ENST00000379446 STRADBQ9C0K7 418 aa6.75□□□□□ -1.33
NEDD9-202ENST00000379446 C6orf203Q9P0P8 240 aaPredicted RBP6.75□□□□□ -1.33
NEDD9-202ENST00000379446 SEPT3Q9UH03 358 aa6.75□□□□□ -1.33
NEDD9-202ENST00000379446 MYH2Q9UKX2 1941 aa6.75□□□□□ -1.33
NEDD9-202ENST00000379446 ITGA11Q9UKX5 1188 aa6.75□□□□□ -1.33
NEDD9-202ENST00000379446 WNT6Q9Y6F9 365 aa6.75□□□□□ -1.33
NEDD9-202ENST00000379446 CCDC160A6NGH7 325 aa6.75□□□□□ -1.33
NEDD9-202ENST00000379446 SOAT2O75908 522 aa6.75□□□□□ -1.33
NEDD9-202ENST00000379446 CCR1P32246 355 aa6.75□□□□□ -1.33
NEDD9-202ENST00000379446 ADCY8P40145 1251 aa6.75□□□□□ -1.33
NEDD9-202ENST00000379446 PTENP60484 403 aa6.75□□□□□ -1.33
NEDD9-202ENST00000379446 TAF11Q15544 211 aa6.75□□□□□ -1.33
NEDD9-202ENST00000379446 C6orf118Q5T5N4 469 aa6.75□□□□□ -1.33
NEDD9-202ENST00000379446 PTRHD1Q6GMV3 140 aaKnown RBP6.75□□□□□ -1.33
NEDD9-202ENST00000379446 GJB7Q6PEY0 223 aa6.75□□□□□ -1.33
NEDD9-202ENST00000379446 CHMP1BQ7LBR1 199 aa6.75□□□□□ -1.33
NEDD9-202ENST00000379446 CBWD2Q8IUF1 395 aa6.75□□□□□ -1.33
NEDD9-202ENST00000379446 SYCE1Q8N0S2 351 aa6.75□□□□□ -1.33
NEDD9-202ENST00000379446 KIF2BQ8N4N8 673 aa6.75□□□□□ -1.33
NEDD9-202ENST00000379446 MRPL38Q96DV4 380 aaKnown RBP6.75□□□□□ -1.33
NEDD9-202ENST00000379446 ELAC2Q9BQ52 826 aaKnown RBP6.75□□□□□ -1.33
NEDD9-202ENST00000379446 RUSC1Q9BVN2 902 aa6.75□□□□□ -1.33
NEDD9-202ENST00000379446 PLCB1Q9NQ66 1216 aa6.75□□□□□ -1.33
NEDD9-202ENST00000379446 TXLNGQ9NUQ3 528 aa6.75□□□□□ -1.33
NEDD9-202ENST00000379446 MUTYHQ9UIF7 546 aa6.75□□□□□ -1.33
NEDD9-202ENST00000379446 ANAPC7Q9UJX3 599 aa6.75□□□□□ -1.33
NEDD9-202ENST00000379446 APOBEC2Q9Y235 224 aaKnown RBP6.75□□□□□ -1.33
NEDD9-202ENST00000379446 USP15Q9Y4E8 981 aaPredicted RBP6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms