RNA–Protein interactions for RNA: ENST00000379016.7

HIPK3-202, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 7,345 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-202ENST00000379016 SLC12A4Q9UP95 1085 aa13.61□□□□□ -0.23
HIPK3-202ENST00000379016 ZNF185O15231 689 aa13.61□□□□□ -0.23
HIPK3-202ENST00000379016 RPL9P32969 192 aaKnown RBP13.61□□□□□ -0.23
HIPK3-202ENST00000379016 EN1Q05925 392 aaPredicted RBP13.61□□□□□ -0.23
HIPK3-202ENST00000379016 OVGP1Q12889 678 aa13.61□□□□□ -0.23
HIPK3-202ENST00000379016 BOP1Q14137 746 aaKnown RBP13.61□□□□□ -0.23
HIPK3-202ENST00000379016 FNDC3BQ53EP0 1204 aaKnown RBP13.61□□□□□ -0.23
HIPK3-202ENST00000379016 TESCQ96BS2 214 aa13.61□□□□□ -0.23
HIPK3-202ENST00000379016 JSRP1Q96MG2 331 aaPredicted RBP13.61□□□□□ -0.23
HIPK3-202ENST00000379016 NUAK2Q9H093 628 aa13.61□□□□□ -0.23
HIPK3-202ENST00000379016 RIMKLBQ9ULI2 386 aa13.61□□□□□ -0.23
HIPK3-202ENST00000379016 GMEB1Q9Y692 573 aa13.61□□□□□ -0.23
HIPK3-202ENST00000379016 C2orf71A6NGG8 1288 aa13.6□□□□□ -0.23
HIPK3-202ENST00000379016 SCN2BO60939 215 aa13.6□□□□□ -0.23
HIPK3-202ENST00000379016 RLN1P04808 185 aa13.6□□□□□ -0.23
HIPK3-202ENST00000379016 SP100P23497 879 aaPredicted RBP13.6□□□□□ -0.23
HIPK3-202ENST00000379016 MECP2P51608 486 aaKnown RBP13.6□□□□□ -0.23
HIPK3-202ENST00000379016 CWF19L1Q69YN2 538 aaKnown RBP13.6□□□□□ -0.23
HIPK3-202ENST00000379016 SYTL5Q8TDW5 730 aaPredicted RBP13.6□□□□□ -0.23
HIPK3-202ENST00000379016 SENP6Q9GZR1 1112 aaPredicted RBP13.6□□□□□ -0.23
HIPK3-202ENST00000379016 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.6□□□□□ -0.23
HIPK3-202ENST00000379016 PTGFRNQ9P2B2 879 aa13.6□□□□□ -0.23
HIPK3-202ENST00000379016 ANGPT4Q9Y264 503 aa13.6□□□□□ -0.23
HIPK3-202ENST00000379016 URB2Q14146 1524 aaKnown RBP13.6□□□□□ -0.23
HIPK3-202ENST00000379016 TSPAN3O60637 253 aa13.6□□□□□ -0.23
HIPK3-202ENST00000379016 EGFRP00533 1210 aa13.6□□□□□ -0.23
HIPK3-202ENST00000379016 PIGHQ14442 188 aaPredicted RBP13.6□□□□□ -0.23
HIPK3-202ENST00000379016 ZNF473Q8WTR7 871 aaKnown RBP13.6□□□□□ -0.23
HIPK3-202ENST00000379016 FBXO32Q969P5 355 aa13.6□□□□□ -0.23
HIPK3-202ENST00000379016 AGPAT1Q99943 283 aa13.6□□□□□ -0.23
HIPK3-202ENST00000379016 TMEM168Q9H0V1 697 aa13.6□□□□□ -0.23
HIPK3-202ENST00000379016 LIMD1Q9UGP4 676 aa13.6□□□□□ -0.23
HIPK3-202ENST00000379016 ZC3H11AO75152 810 aaKnown RBP eCLIP13.6□□□□□ -0.23
HIPK3-202ENST00000379016 CD4P01730 458 aa13.6□□□□□ -0.23
HIPK3-202ENST00000379016 FAM200BP0CF97 657 aa13.6□□□□□ -0.23
HIPK3-202ENST00000379016 GTF2IRD2BQ6EKJ0 949 aa13.6□□□□□ -0.23
HIPK3-202ENST00000379016 GTF2IRD2Q86UP8 949 aa13.6□□□□□ -0.23
HIPK3-202ENST00000379016 KBTBD2Q8IY47 623 aa13.6□□□□□ -0.23
HIPK3-202ENST00000379016 DENND6BQ8NEG7 585 aa13.6□□□□□ -0.23
HIPK3-202ENST00000379016 OR52L1Q8NGH7 329 aa13.6□□□□□ -0.23
HIPK3-202ENST00000379016 MCOLN3Q8TDD5 553 aa13.6□□□□□ -0.23
HIPK3-202ENST00000379016 PHF24Q9UPV7 400 aa13.6□□□□□ -0.23
HIPK3-202ENST00000379016 MFSD7Q6UXD7 560 aa13.6□□□□□ -0.23
HIPK3-202ENST00000379016 MCEMP1Q8IX19 187 aa13.6□□□□□ -0.23
HIPK3-202ENST00000379016 CNPY4Q8N129 248 aa13.6□□□□□ -0.23
HIPK3-202ENST00000379016 EIF2AK1Q9BQI3 630 aaKnown RBP13.6□□□□□ -0.23
HIPK3-202ENST00000379016 ZSWIM5Q9P217 1185 aa13.6□□□□□ -0.23
HIPK3-202ENST00000379016 CTCFP49711 727 aaPredicted RBP13.6□□□□□ -0.23
HIPK3-202ENST00000379016 RPL19P84098 196 aaKnown RBP13.6□□□□□ -0.23
HIPK3-202ENST00000379016 RIPOR1Q6ZS17 1223 aa13.6□□□□□ -0.23
HIPK3-202ENST00000379016 LINC00523Q86TU6 105 aa13.6□□□□□ -0.23
HIPK3-202ENST00000379016 RORBQ92753 470 aa13.6□□□□□ -0.23
HIPK3-202ENST00000379016 AIFM2Q9BRQ8 373 aa13.6□□□□□ -0.23
HIPK3-202ENST00000379016 ARHGAP28Q9P2N2 729 aa13.6□□□□□ -0.23
HIPK3-202ENST00000379016 OR10H1Q9Y4A9 318 aa13.6□□□□□ -0.23
HIPK3-202ENST00000379016 SYNJ1O43426 1573 aa13.6□□□□□ -0.23
HIPK3-202ENST00000379016 RAD51BO15315 384 aa13.6□□□□□ -0.23
HIPK3-202ENST00000379016 PGK1P00558 417 aa13.6□□□□□ -0.23
HIPK3-202ENST00000379016 DGCR6Q14129 220 aa13.6□□□□□ -0.23
HIPK3-202ENST00000379016 ARL6IP4Q66PJ3 421 aaKnown RBP13.6□□□□□ -0.23
HIPK3-202ENST00000379016 APOBEC3FQ8IUX4 373 aaKnown RBP13.6□□□□□ -0.23
HIPK3-202ENST00000379016 SEPT12Q8IYM1 358 aa13.6□□□□□ -0.23
HIPK3-202ENST00000379016 SVOPQ8N4V2 548 aa13.6□□□□□ -0.23
HIPK3-202ENST00000379016 SLC20A1Q8WUM9 679 aa13.6□□□□□ -0.23
HIPK3-202ENST00000379016 PHF21BQ96EK2 531 aa13.6□□□□□ -0.23
HIPK3-202ENST00000379016 VPS51Q9UID3 782 aa13.6□□□□□ -0.23
HIPK3-202ENST00000379016 PNMA8CA0A1B0GUJ8 204 aa13.59□□□□□ -0.23
HIPK3-202ENST00000379016 IFNA6P05013 189 aa13.59□□□□□ -0.23
HIPK3-202ENST00000379016 POLD2P49005 469 aa13.59□□□□□ -0.23
HIPK3-202ENST00000379016 GPR15P49685 360 aa13.59□□□□□ -0.23
HIPK3-202ENST00000379016 CHN2P52757 468 aa13.59□□□□□ -0.23
HIPK3-202ENST00000379016 ATN1P54259 1190 aaPredicted RBP13.59□□□□□ -0.23
HIPK3-202ENST00000379016 NCOA4Q13772 614 aa13.59□□□□□ -0.23
HIPK3-202ENST00000379016 FAM98BQ52LJ0 330 aaKnown RBP13.59□□□□□ -0.23
HIPK3-202ENST00000379016 TBCELQ5QJ74 424 aa13.59□□□□□ -0.23
HIPK3-202ENST00000379016 STRIP1Q5VSL9 837 aa13.59□□□□□ -0.23
HIPK3-202ENST00000379016 DNAJC14Q6Y2X3 702 aaPredicted RBP13.59□□□□□ -0.23
HIPK3-202ENST00000379016 PARP8Q8N3A8 854 aa13.59□□□□□ -0.23
HIPK3-202ENST00000379016 DCAF4Q8WV16 495 aa13.59□□□□□ -0.23
HIPK3-202ENST00000379016 TOP1MTQ969P6 601 aa13.59□□□□□ -0.23
HIPK3-202ENST00000379016 OSBPL8Q9BZF1 889 aa13.59□□□□□ -0.23
HIPK3-202ENST00000379016 EPB41L1Q9H4G0 881 aa13.59□□□□□ -0.23
HIPK3-202ENST00000379016 INPP4BO15327 924 aa13.59□□□□□ -0.23
HIPK3-202ENST00000379016 VHLP40337 213 aa13.59□□□□□ -0.23
HIPK3-202ENST00000379016 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.59□□□□□ -0.233e-12■■■■■ 56.2
HIPK3-202ENST00000379016 CERKQ8TCT0 537 aa13.59□□□□□ -0.23
HIPK3-202ENST00000379016 CKAP2Q8WWK9 683 aa13.59□□□□□ -0.23
HIPK3-202ENST00000379016 RAD54LQ92698 747 aa13.59□□□□□ -0.23
HIPK3-202ENST00000379016 APOL4Q9BPW4 351 aa13.59□□□□□ -0.23
HIPK3-202ENST00000379016 ABCG4Q9H172 646 aa13.59□□□□□ -0.23
HIPK3-202ENST00000379016 DNAJC11Q9NVH1 559 aa13.59□□□□□ -0.23
HIPK3-202ENST00000379016 ATP10DQ9P241 1426 aa13.59□□□□□ -0.23
HIPK3-202ENST00000379016 EPORP19235 508 aa13.59□□□□□ -0.23
HIPK3-202ENST00000379016 SFNP31947 248 aa13.59□□□□□ -0.23
HIPK3-202ENST00000379016 HSD17B3P37058 310 aa13.59□□□□□ -0.23
HIPK3-202ENST00000379016 NAPEPLDQ6IQ20 393 aa13.59□□□□□ -0.23
HIPK3-202ENST00000379016 ZBTB49Q6ZSB9 765 aa13.59□□□□□ -0.23
HIPK3-202ENST00000379016 ENOSF1Q7L5Y1 443 aa13.59□□□□□ -0.23
HIPK3-202ENST00000379016 SH2D3CQ8N5H7 860 aa13.59□□□□□ -0.23
HIPK3-202ENST00000379016 SLC4A5Q9BY07 1137 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms