RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 STOML2Q9UJZ1 356 aa13.79□□□□□ -0.2
CKAP2-202ENST00000378034 AGO1Q9UL18 857 aaKnown RBP13.79□□□□□ -0.2
CKAP2-202ENST00000378034 SPECC1L-ADORA2AF8WAN1 911 aa13.78□□□□□ -0.2
CKAP2-202ENST00000378034 F9P00740 461 aa13.78□□□□□ -0.2
CKAP2-202ENST00000378034 PLEKP08567 350 aaPredicted RBP13.78□□□□□ -0.2
CKAP2-202ENST00000378034 KRT3P12035 628 aa13.78□□□□□ -0.2
CKAP2-202ENST00000378034 CTHP32929 405 aa13.78□□□□□ -0.2
CKAP2-202ENST00000378034 RNASE9P60153 205 aaKnown RBP13.78□□□□□ -0.2
CKAP2-202ENST00000378034 DHCR24Q15392 516 aa13.78□□□□□ -0.2
CKAP2-202ENST00000378034 IER5LQ5T953 404 aa13.78□□□□□ -0.2
CKAP2-202ENST00000378034 RHBDF2Q6PJF5 856 aa13.78□□□□□ -0.2
CKAP2-202ENST00000378034 DENND1CQ8IV53 801 aa13.78□□□□□ -0.2
CKAP2-202ENST00000378034 FAM217AQ8IXS0 508 aa13.78□□□□□ -0.2
CKAP2-202ENST00000378034 CPXM2Q8N436 756 aa13.78□□□□□ -0.2
CKAP2-202ENST00000378034 FCRL2Q96LA5 508 aaPredicted RBP13.78□□□□□ -0.2
CKAP2-202ENST00000378034 OSBPL6Q9BZF3 934 aa13.78□□□□□ -0.2
CKAP2-202ENST00000378034 SPHK2Q9NRA0 654 aa13.78□□□□□ -0.2
CKAP2-202ENST00000378034 METTL5Q9NRN9 209 aaKnown RBP13.78□□□□□ -0.2
CKAP2-202ENST00000378034 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.78□□□□□ -0.2
CKAP2-202ENST00000378034 DDIT4Q9NX09 232 aa13.78□□□□□ -0.2
CKAP2-202ENST00000378034 CUL9Q8IWT3 2517 aa13.78□□□□□ -0.2
CKAP2-202ENST00000378034 TCRBV5S1A1TA0A578 114 aa13.78□□□□□ -0.2
CKAP2-202ENST00000378034 KANSL1LA0AUZ9 987 aa13.78□□□□□ -0.2
CKAP2-202ENST00000378034 OTOL1A6NHN0 477 aaPredicted RBP13.78□□□□□ -0.2
CKAP2-202ENST00000378034 TMCO5BA8MYB1 307 aa13.78□□□□□ -0.2
CKAP2-202ENST00000378034 PRR33A8MZF0 331 aa13.78□□□□□ -0.2
CKAP2-202ENST00000378034 APOEP02649 317 aa13.78□□□□□ -0.2
CKAP2-202ENST00000378034 CYP17A1P05093 508 aa13.78□□□□□ -0.2
CKAP2-202ENST00000378034 GJA4P35212 333 aa13.78□□□□□ -0.2
CKAP2-202ENST00000378034 EIF4A3P38919 411 aaKnown RBP13.78□□□□□ -0.2
CKAP2-202ENST00000378034 SLC11A2P49281 568 aa13.78□□□□□ -0.2
CKAP2-202ENST00000378034 GAD2Q05329 585 aa13.78□□□□□ -0.2
CKAP2-202ENST00000378034 TMEM31Q5JXX7 168 aa13.78□□□□□ -0.2
CKAP2-202ENST00000378034 DNAJC24Q6P3W2 148 aa13.78□□□□□ -0.2
CKAP2-202ENST00000378034 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.78□□□□□ -0.2
CKAP2-202ENST00000378034 ADAM32Q8TC27 787 aa13.78□□□□□ -0.2
CKAP2-202ENST00000378034 FAM3CQ92520 227 aa13.78□□□□□ -0.2
CKAP2-202ENST00000378034 PBXIP1Q96AQ6 731 aa13.78□□□□□ -0.2
CKAP2-202ENST00000378034 DDX50Q9BQ39 737 aaKnown RBP13.78□□□□□ -0.2
CKAP2-202ENST00000378034 TBC1D17Q9HA65 648 aa13.78□□□□□ -0.2
CKAP2-202ENST00000378034 PARVAQ9NVD7 372 aa13.78□□□□□ -0.2
CKAP2-202ENST00000378034 MARK1Q9P0L2 795 aa13.78□□□□□ -0.2
CKAP2-202ENST00000378034 SLC12A6Q9UHW9 1150 aa13.78□□□□□ -0.2
CKAP2-202ENST00000378034 PAXBP1Q9Y5B6 917 aa13.78□□□□□ -0.2
CKAP2-202ENST00000378034 A0A087X0T9 212 aa13.77□□□□□ -0.21
CKAP2-202ENST00000378034 FAM170AA1A519 330 aa13.77□□□□□ -0.21
CKAP2-202ENST00000378034 ANKRD62A6NC57 917 aa13.77□□□□□ -0.21
CKAP2-202ENST00000378034 M0QYT0 321 aa13.77□□□□□ -0.21
CKAP2-202ENST00000378034 SCAMP3O14828 347 aaKnown RBP13.77□□□□□ -0.21
CKAP2-202ENST00000378034 HOXC11O43248 304 aaPredicted RBP13.77□□□□□ -0.21
CKAP2-202ENST00000378034 ADCY5O95622 1261 aa13.77□□□□□ -0.21
CKAP2-202ENST00000378034 FAM228BP0C875 321 aa13.77□□□□□ -0.21
CKAP2-202ENST00000378034 ADH5P11766 374 aa13.77□□□□□ -0.21
CKAP2-202ENST00000378034 CCR1P32246 355 aa13.77□□□□□ -0.21
CKAP2-202ENST00000378034 FLT3P36888 993 aa13.77□□□□□ -0.21
CKAP2-202ENST00000378034 CLCN5P51795 746 aa13.77□□□□□ -0.21
CKAP2-202ENST00000378034 PPP2R5DQ14738 602 aa13.77□□□□□ -0.21
CKAP2-202ENST00000378034 ADGRF1Q5T601 910 aa13.77□□□□□ -0.21
CKAP2-202ENST00000378034 ALKBH5Q6P6C2 394 aaKnown RBP13.77□□□□□ -0.21
CKAP2-202ENST00000378034 SND1Q7KZF4 910 aaKnown RBP eCLIP13.77□□□□□ -0.21
CKAP2-202ENST00000378034 TC2NQ8N9U0 490 aa13.77□□□□□ -0.21
CKAP2-202ENST00000378034 TTC8Q8TAM2 541 aa13.77□□□□□ -0.21
CKAP2-202ENST00000378034 DEF6Q9H4E7 631 aa13.77□□□□□ -0.21
CKAP2-202ENST00000378034 C11orf16Q9NQ32 467 aa13.77□□□□□ -0.21
CKAP2-202ENST00000378034 IMPACTQ9P2X3 320 aa13.77□□□□□ -0.21
CKAP2-202ENST00000378034 MUC3AQ02505 3323 aa13.77□□□□□ -0.21
CKAP2-202ENST00000378034 C2CD4BA6NLJ0 364 aa13.76□□□□□ -0.21
CKAP2-202ENST00000378034 PDGFRAP16234 1089 aa13.76□□□□□ -0.21
CKAP2-202ENST00000378034 RRM1P23921 792 aa13.76□□□□□ -0.21
CKAP2-202ENST00000378034 SDC4P31431 198 aa13.76□□□□□ -0.21
CKAP2-202ENST00000378034 EIF2DP41214 584 aaKnown RBP13.76□□□□□ -0.21
CKAP2-202ENST00000378034 PTPN9P43378 593 aa13.76□□□□□ -0.21
CKAP2-202ENST00000378034 SULT1E1P49888 294 aa13.76□□□□□ -0.21
CKAP2-202ENST00000378034 PITX1P78337 314 aaPredicted RBP13.76□□□□□ -0.21
CKAP2-202ENST00000378034 SLC18A3Q16572 532 aa13.76□□□□□ -0.21
CKAP2-202ENST00000378034 ASTE1Q2TB18 679 aaPredicted RBP13.76□□□□□ -0.21
CKAP2-202ENST00000378034 LY6G5CQ5SRR4 150 aa13.76□□□□□ -0.21
CKAP2-202ENST00000378034 PPP1R15BQ5SWA1 713 aa13.76□□□□□ -0.21
CKAP2-202ENST00000378034 PLEKHA7Q6IQ23 1121 aa13.76□□□□□ -0.21
CKAP2-202ENST00000378034 BNIPLQ7Z465 357 aa13.76□□□□□ -0.21
CKAP2-202ENST00000378034 FBXL6Q8N531 539 aa13.76□□□□□ -0.21
CKAP2-202ENST00000378034 ATP6V0D2Q8N8Y2 350 aa13.76□□□□□ -0.21
CKAP2-202ENST00000378034 BTN2A3PQ96KV6 586 aa13.76□□□□□ -0.21
CKAP2-202ENST00000378034 CCDC42Q96M95 316 aa13.76□□□□□ -0.21
CKAP2-202ENST00000378034 PANX2Q96RD6 677 aa13.76□□□□□ -0.21
CKAP2-202ENST00000378034 NENFQ9UMX5 172 aa13.76□□□□□ -0.21
CKAP2-202ENST00000378034 SCINQ9Y6U3 715 aa13.76□□□□□ -0.21
CKAP2-202ENST00000378034 SHISA7A6NL88 538 aa13.76□□□□□ -0.21
CKAP2-202ENST00000378034 STK25O00506 426 aa13.76□□□□□ -0.21
CKAP2-202ENST00000378034 TRDMT1O14717 391 aaKnown RBP13.76□□□□□ -0.21
CKAP2-202ENST00000378034 NCAM2O15394 837 aa13.76□□□□□ -0.21
CKAP2-202ENST00000378034 ACSL4O60488 711 aa13.76□□□□□ -0.21
CKAP2-202ENST00000378034 ENDOD1O94919 500 aa13.76□□□□□ -0.21
CKAP2-202ENST00000378034 CYBBP04839 570 aa13.76□□□□□ -0.21
CKAP2-202ENST00000378034 ABCB4P21439 1286 aa13.76□□□□□ -0.21
CKAP2-202ENST00000378034 SOX9P48436 509 aa13.76□□□□□ -0.21
CKAP2-202ENST00000378034 CXCR3P49682 368 aa13.76□□□□□ -0.21
CKAP2-202ENST00000378034 DEUP1Q05D60 604 aa13.76□□□□□ -0.21
CKAP2-202ENST00000378034 PREPLQ4J6C6 727 aaPredicted RBP13.76□□□□□ -0.21
CKAP2-202ENST00000378034 ZC3H12AQ5D1E8 599 aaKnown RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms