RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 SLC4A5Q9BY07 1137 aa17.55■□□□□ 0.4
HMGN4-201ENST00000377575 ACP6Q9NPH0 428 aa17.55■□□□□ 0.4
HMGN4-201ENST00000377575 PCDHGC3Q9UN70 934 aa17.55■□□□□ 0.4
HMGN4-201ENST00000377575 STARD13Q9Y3M8 1113 aa17.55■□□□□ 0.4
HMGN4-201ENST00000377575 ANTXRLA6NF34 631 aa17.54■□□□□ 0.4
HMGN4-201ENST00000377575 E5RJQ4 531 aa17.54■□□□□ 0.4
HMGN4-201ENST00000377575 SGK1O00141 431 aa17.54■□□□□ 0.4
HMGN4-201ENST00000377575 TRIM24O15164 1050 aa17.54■□□□□ 0.4
HMGN4-201ENST00000377575 RAPGEF1Q13905 1077 aa17.54■□□□□ 0.4
HMGN4-201ENST00000377575 EMC10Q5UCC4 262 aa17.54■□□□□ 0.4
HMGN4-201ENST00000377575 TOGARAM2Q6ZUX3 1019 aa17.54■□□□□ 0.4
HMGN4-201ENST00000377575 C11orf74Q86VG3 221 aa17.54■□□□□ 0.4
HMGN4-201ENST00000377575 RASSF3Q86WH2 238 aa17.54■□□□□ 0.4
HMGN4-201ENST00000377575 UNC45BQ8IWX7 931 aa17.54■□□□□ 0.4
HMGN4-201ENST00000377575 SCUBE3Q8IX30 993 aa17.54■□□□□ 0.4
HMGN4-201ENST00000377575 FAM160A2Q8N612 972 aaPredicted RBP17.54■□□□□ 0.4
HMGN4-201ENST00000377575 DDI1Q8WTU0 396 aa17.54■□□□□ 0.4
HMGN4-201ENST00000377575 SERPINB11Q96P15 392 aa17.54■□□□□ 0.4
HMGN4-201ENST00000377575 FBXO10Q9UK96 956 aa17.54■□□□□ 0.4
HMGN4-201ENST00000377575 AJAP1Q9UKB5 411 aaPredicted RBP17.54■□□□□ 0.4
HMGN4-201ENST00000377575 USP18Q9UMW8 372 aa17.54■□□□□ 0.4
HMGN4-201ENST00000377575 SLC27A6Q9Y2P4 619 aa17.54■□□□□ 0.4
HMGN4-201ENST00000377575 CEP83Q9Y592 693 aa17.54■□□□□ 0.4
HMGN4-201ENST00000377575 DMXL1Q9Y485 3027 aa17.54■□□□□ 0.4
HMGN4-201ENST00000377575 SPTBN4Q9H254 2564 aa17.54■□□□□ 0.4
HMGN4-201ENST00000377575 CAPN9O14815 690 aa17.53■□□□□ 0.4
HMGN4-201ENST00000377575 ADAM23O75077 832 aa17.53■□□□□ 0.4
HMGN4-201ENST00000377575 IGLV3-27P01718 113 aa17.53■□□□□ 0.4
HMGN4-201ENST00000377575 CISD3P0C7P0 127 aa17.53■□□□□ 0.4
HMGN4-201ENST00000377575 NTSR1P30989 418 aa17.53■□□□□ 0.4
HMGN4-201ENST00000377575 KRT9P35527 623 aa17.53■□□□□ 0.4
HMGN4-201ENST00000377575 SLC11A2P49281 568 aa17.53■□□□□ 0.4
HMGN4-201ENST00000377575 SNX16P57768 344 aa17.53■□□□□ 0.4
HMGN4-201ENST00000377575 BPIFB4P59827 614 aa17.53■□□□□ 0.4
HMGN4-201ENST00000377575 RING1Q06587 406 aa17.53■□□□□ 0.4
HMGN4-201ENST00000377575 NNTQ13423 1086 aa17.53■□□□□ 0.4
HMGN4-201ENST00000377575 E2F5Q15329 346 aa17.53■□□□□ 0.4
HMGN4-201ENST00000377575 MPPE1Q53F39 396 aa17.53■□□□□ 0.4
HMGN4-201ENST00000377575 USP39Q53GS9 565 aaKnown RBP17.53■□□□□ 0.4
HMGN4-201ENST00000377575 CDKAL1Q5VV42 579 aa17.53■□□□□ 0.4
HMGN4-201ENST00000377575 SDE2Q6IQ49 451 aa17.53■□□□□ 0.4
HMGN4-201ENST00000377575 TMEM92Q6UXU6 159 aa17.53■□□□□ 0.4
HMGN4-201ENST00000377575 BEND5Q7L4P6 421 aa17.53■□□□□ 0.4
HMGN4-201ENST00000377575 ANKS1BQ7Z6G8 1248 aa17.53■□□□□ 0.4
HMGN4-201ENST00000377575 TMEM110Q86TL2 294 aa17.53■□□□□ 0.4
HMGN4-201ENST00000377575 ANKRD20A12PQ8NF67 263 aa17.53■□□□□ 0.4
HMGN4-201ENST00000377575 MDGA1Q8NFP4 955 aa17.53■□□□□ 0.4
HMGN4-201ENST00000377575 LOXL4Q96JB6 756 aa17.53■□□□□ 0.4
HMGN4-201ENST00000377575 LSM14BQ9BX40 385 aaKnown RBP17.53■□□□□ 0.4
HMGN4-201ENST00000377575 SLC2A11Q9BYW1 496 aa17.53■□□□□ 0.4
HMGN4-201ENST00000377575 ZDHHC4Q9NPG8 344 aa17.53■□□□□ 0.4
HMGN4-201ENST00000377575 TAB2Q9NYJ8 693 aa17.53■□□□□ 0.4
HMGN4-201ENST00000377575 BCCIPQ9P287 314 aaKnown RBP eCLIP17.53■□□□□ 0.4
HMGN4-201ENST00000377575 CYTH4Q9UIA0 394 aa17.53■□□□□ 0.4
HMGN4-201ENST00000377575 STOML2Q9UJZ1 356 aa17.53■□□□□ 0.4
HMGN4-201ENST00000377575 TCRBV21S2A2A0A5A6 115 aa17.52■□□□□ 0.4
HMGN4-201ENST00000377575 FOXN3O00409 490 aaPredicted RBP17.52■□□□□ 0.4
HMGN4-201ENST00000377575 PAPSS1O43252 624 aaPredicted RBP17.52■□□□□ 0.4
HMGN4-201ENST00000377575 HOXB2P14652 356 aa17.52■□□□□ 0.4
HMGN4-201ENST00000377575 TBX4P57082 545 aa17.52■□□□□ 0.4
HMGN4-201ENST00000377575 MYL5Q02045 173 aa17.52■□□□□ 0.4
HMGN4-201ENST00000377575 ELF2Q15723 593 aa17.52■□□□□ 0.4
HMGN4-201ENST00000377575 ADGRF1Q5T601 910 aa17.52■□□□□ 0.4
HMGN4-201ENST00000377575 KLHDC7AQ5VTJ3 777 aa17.52■□□□□ 0.4
HMGN4-201ENST00000377575 EGFLAMQ63HQ2 1017 aa17.52■□□□□ 0.4
HMGN4-201ENST00000377575 KBTBD6Q86V97 674 aa17.52■□□□□ 0.4
HMGN4-201ENST00000377575 SLC47A2Q86VL8 602 aa17.52■□□□□ 0.4
HMGN4-201ENST00000377575 PASD1Q8IV76 773 aa17.52■□□□□ 0.4
HMGN4-201ENST00000377575 FAM71AQ8IYT1 594 aa17.52■□□□□ 0.4
HMGN4-201ENST00000377575 CHPFQ8IZ52 775 aa17.52■□□□□ 0.4
HMGN4-201ENST00000377575 DQX1Q8TE96 717 aaKnown RBP17.52■□□□□ 0.4
HMGN4-201ENST00000377575 ZC3H10Q96K80 434 aaKnown RBP17.52■□□□□ 0.4
HMGN4-201ENST00000377575 SPACA7Q96KW9 195 aa17.52■□□□□ 0.4
HMGN4-201ENST00000377575 IRX2Q9BZI1 471 aaPredicted RBP17.52■□□□□ 0.4
HMGN4-201ENST00000377575 TPSD1Q9BZJ3 242 aa17.52■□□□□ 0.4
HMGN4-201ENST00000377575 LHX5Q9H2C1 402 aa17.52■□□□□ 0.4
HMGN4-201ENST00000377575 POPDC2Q9HBU9 364 aa17.52■□□□□ 0.4
HMGN4-201ENST00000377575 FHOD1Q9Y613 1164 aa17.52■□□□□ 0.4
HMGN4-201ENST00000377575 THADAQ6YHU6 1953 aa17.51■□□□□ 0.39
HMGN4-201ENST00000377575 PRRT4C9JH25 899 aa17.51■□□□□ 0.39
HMGN4-201ENST00000377575 NPC1O15118 1278 aa17.51■□□□□ 0.39
HMGN4-201ENST00000377575 ZBTB24O43167 697 aaPredicted RBP17.51■□□□□ 0.39
HMGN4-201ENST00000377575 RHOBTB1O94844 696 aa17.51■□□□□ 0.39
HMGN4-201ENST00000377575 PNMA6AP0CW24 399 aaPredicted RBP17.51■□□□□ 0.39
HMGN4-201ENST00000377575 HNRNPLP14866 589 aaKnown RBP eCLIP17.51■□□□□ 0.39
HMGN4-201ENST00000377575 UCHL3P15374 230 aa17.51■□□□□ 0.39
HMGN4-201ENST00000377575 CLCN1P35523 988 aa17.51■□□□□ 0.39
HMGN4-201ENST00000377575 LMNB2Q03252 620 aa17.51■□□□□ 0.39
HMGN4-201ENST00000377575 SPEM2Q0P670 501 aa17.51■□□□□ 0.39
HMGN4-201ENST00000377575 KCNMA1Q12791 1236 aa17.51■□□□□ 0.39
HMGN4-201ENST00000377575 DRAP1Q14919 205 aaPredicted RBP17.51■□□□□ 0.39
HMGN4-201ENST00000377575 KRT31Q15323 416 aa17.51■□□□□ 0.39
HMGN4-201ENST00000377575 FKBP15Q5T1M5 1219 aa17.51■□□□□ 0.39
HMGN4-201ENST00000377575 C11orf57Q6ZUT1 292 aaPredicted RBP17.51■□□□□ 0.39
HMGN4-201ENST00000377575 C1orf131Q8NDD1 294 aaKnown RBP17.51■□□□□ 0.39
HMGN4-201ENST00000377575 IPO4Q8TEX9 1081 aaKnown RBP17.51■□□□□ 0.39
HMGN4-201ENST00000377575 UCMAQ8WVF2 138 aa17.51■□□□□ 0.39
HMGN4-201ENST00000377575 HMGB4Q8WW32 186 aa17.51■□□□□ 0.39
HMGN4-201ENST00000377575 P2RY11Q96G91 374 aa17.51■□□□□ 0.39
HMGN4-201ENST00000377575 PPP1R13BQ96KQ4 1090 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms