RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 ZFATQ9P243 1243 aa13.36□□□□□ -0.27
USP11-204ENST00000377107 CPSF2Q9P2I0 782 aaKnown RBP13.36□□□□□ -0.27
USP11-204ENST00000377107 EFR3BQ9Y2G0 817 aa13.36□□□□□ -0.27
USP11-204ENST00000377107 IGKV6-21A0A0C4DH24 114 aa13.35□□□□□ -0.27
USP11-204ENST00000377107 M0QYT0 321 aa13.35□□□□□ -0.27
USP11-204ENST00000377107 CHADO15335 359 aa13.35□□□□□ -0.27
USP11-204ENST00000377107 GSC2O15499 205 aa13.35□□□□□ -0.27
USP11-204ENST00000377107 IL4RP24394 825 aa13.35□□□□□ -0.27
USP11-204ENST00000377107 ATICP31939 592 aa13.35□□□□□ -0.27
USP11-204ENST00000377107 NDUFV1P49821 464 aa13.35□□□□□ -0.27
USP11-204ENST00000377107 CCDC15Q0P6D6 951 aa13.35□□□□□ -0.27
USP11-204ENST00000377107 PDK2Q15119 407 aa13.35□□□□□ -0.27
USP11-204ENST00000377107 PAN2Q504Q3 1202 aaKnown RBP13.35□□□□□ -0.27
USP11-204ENST00000377107 N4BP2L1Q5TBK1 243 aaPredicted RBP13.35□□□□□ -0.27
USP11-204ENST00000377107 ISLR2Q6UXK2 745 aa13.35□□□□□ -0.27
USP11-204ENST00000377107 TNS4Q8IZW8 715 aa13.35□□□□□ -0.27
USP11-204ENST00000377107 INPP5DQ92835 1189 aa13.35□□□□□ -0.27
USP11-204ENST00000377107 AZIN2Q96A70 460 aa13.35□□□□□ -0.27
USP11-204ENST00000377107 PPCSQ9HAB8 311 aa13.35□□□□□ -0.27
USP11-204ENST00000377107 DNAJC16Q9Y2G8 782 aa13.35□□□□□ -0.27
USP11-204ENST00000377107 PTPN7P35236 360 aa13.35□□□□□ -0.27
USP11-204ENST00000377107 SKIV2L2P42285 1042 aaKnown RBP13.35□□□□□ -0.27
USP11-204ENST00000377107 LAMC2Q13753 1193 aa13.35□□□□□ -0.27
USP11-204ENST00000377107 FASTKD1Q53R41 847 aaKnown RBP13.35□□□□□ -0.27
USP11-204ENST00000377107 SH3D19Q5HYK7 790 aa13.35□□□□□ -0.27
USP11-204ENST00000377107 SNX30Q5VWJ9 437 aa13.35□□□□□ -0.27
USP11-204ENST00000377107 MTHFD1LQ6UB35 978 aa13.35□□□□□ -0.27
USP11-204ENST00000377107 CMC1Q7Z7K0 106 aa13.35□□□□□ -0.27
USP11-204ENST00000377107 GPC2Q8N158 579 aa13.35□□□□□ -0.27
USP11-204ENST00000377107 FBXO41Q8TF61 875 aa13.35□□□□□ -0.27
USP11-204ENST00000377107 POPDC2Q9HBU9 364 aa13.35□□□□□ -0.27
USP11-204ENST00000377107 GBA2Q9HCG7 927 aaPredicted RBP13.35□□□□□ -0.27
USP11-204ENST00000377107 ITGA11Q9UKX5 1188 aa13.35□□□□□ -0.27
USP11-204ENST00000377107 FIS1Q9Y3D6 152 aa13.35□□□□□ -0.27
USP11-204ENST00000377107 RPS6KL1Q9Y6S9 549 aa13.35□□□□□ -0.27
USP11-204ENST00000377107 ASB14A6NK59 587 aa13.35□□□□□ -0.27
USP11-204ENST00000377107 NVLO15381 856 aaKnown RBP13.35□□□□□ -0.27
USP11-204ENST00000377107 STK10O94804 968 aaKnown RBP13.35□□□□□ -0.27
USP11-204ENST00000377107 PFKMP08237 780 aa13.35□□□□□ -0.27
USP11-204ENST00000377107 PSMB4P28070 264 aa13.35□□□□□ -0.27
USP11-204ENST00000377107 SLC8A3P57103 927 aa13.35□□□□□ -0.27
USP11-204ENST00000377107 ZNF484Q5JVG2 852 aa13.35□□□□□ -0.27
USP11-204ENST00000377107 VWA5B1Q5TIE3 1220 aa13.35□□□□□ -0.27
USP11-204ENST00000377107 RASSF3Q86WH2 238 aa13.35□□□□□ -0.27
USP11-204ENST00000377107 SIX6OS1Q8N1H7 587 aa13.35□□□□□ -0.27
USP11-204ENST00000377107 GSDMBQ8TAX9 411 aa13.35□□□□□ -0.27
USP11-204ENST00000377107 TFB1MQ8WVM0 346 aaKnown RBP13.35□□□□□ -0.27
USP11-204ENST00000377107 CDKL2Q92772 493 aa13.35□□□□□ -0.27
USP11-204ENST00000377107 ATP2A3Q93084 1043 aa13.35□□□□□ -0.27
USP11-204ENST00000377107 RNF39Q9H2S5 420 aa13.35□□□□□ -0.27
USP11-204ENST00000377107 SLC5A4Q9NY91 659 aa13.35□□□□□ -0.27
USP11-204ENST00000377107 RGS17Q9UGC6 210 aaPredicted RBP13.35□□□□□ -0.27
USP11-204ENST00000377107 PRR5-ARHGAP8B1AHC4 643 aa13.34□□□□□ -0.27
USP11-204ENST00000377107 SPECC1L-ADORA2AF8WAN1 911 aa13.34□□□□□ -0.27
USP11-204ENST00000377107 NEMP1O14524 444 aa13.34□□□□□ -0.27
USP11-204ENST00000377107 CNMDO75829 334 aa13.34□□□□□ -0.27
USP11-204ENST00000377107 ARHGAP8P85298 464 aa13.34□□□□□ -0.27
USP11-204ENST00000377107 ACSBG2Q5FVE4 666 aa13.34□□□□□ -0.27
USP11-204ENST00000377107 TWF2Q6IBS0 349 aaKnown RBP13.34□□□□□ -0.27
USP11-204ENST00000377107 OLFML1Q6UWY5 402 aa13.34□□□□□ -0.27
USP11-204ENST00000377107 C4orf50Q6ZRC1 276 aa13.34□□□□□ -0.27
USP11-204ENST00000377107 STKLD1Q8NE28 680 aa13.34□□□□□ -0.27
USP11-204ENST00000377107 DNAJB3Q8WWF6 145 aa13.34□□□□□ -0.27
USP11-204ENST00000377107 FGD4Q96M96 766 aa13.34□□□□□ -0.27
USP11-204ENST00000377107 FERMT1Q9BQL6 677 aa13.34□□□□□ -0.27
USP11-204ENST00000377107 FRMD8P1Q9BZ68 369 aaPredicted RBP13.34□□□□□ -0.27
USP11-204ENST00000377107 MAN1C1Q9NR34 630 aa13.34□□□□□ -0.27
USP11-204ENST00000377107 STOML1Q9UBI4 398 aa13.34□□□□□ -0.27
USP11-204ENST00000377107 PLLPQ9Y342 182 aa13.34□□□□□ -0.27
USP11-204ENST00000377107 WASF2Q9Y6W5 498 aa13.34□□□□□ -0.27
USP11-204ENST00000377107 MCM3APO60318 1980 aa13.34□□□□□ -0.27
USP11-204ENST00000377107 E7ESA3 106 aa13.34□□□□□ -0.27
USP11-204ENST00000377107 TPP1O14773 563 aa13.34□□□□□ -0.27
USP11-204ENST00000377107 HUS1O60921 280 aa13.34□□□□□ -0.27
USP11-204ENST00000377107 LGR5O75473 907 aa13.34□□□□□ -0.27
USP11-204ENST00000377107 ARHGAP1Q07960 439 aa13.34□□□□□ -0.27
USP11-204ENST00000377107 PARP6Q2NL67 630 aa13.34□□□□□ -0.27
USP11-204ENST00000377107 TLDC1Q6P9B6 456 aa13.34□□□□□ -0.27
USP11-204ENST00000377107 SLC7A14Q8TBB6 771 aa13.34□□□□□ -0.27
USP11-204ENST00000377107 HTR3CQ8WXA8 447 aa13.34□□□□□ -0.27
USP11-204ENST00000377107 CSPG4P5Q96PW8 444 aa13.34□□□□□ -0.27
USP11-204ENST00000377107 KCTD15Q96SI1 283 aaPredicted RBP13.34□□□□□ -0.27
USP11-204ENST00000377107 SIK2Q9H0K1 926 aa13.34□□□□□ -0.27
USP11-204ENST00000377107 PHIPQ8WWQ0 1821 aa13.34□□□□□ -0.27
USP11-204ENST00000377107 RNF103O00237 685 aa13.34□□□□□ -0.27
USP11-204ENST00000377107 DLDP09622 509 aaKnown RBP13.34□□□□□ -0.27
USP11-204ENST00000377107 SLC26A2P50443 739 aa13.34□□□□□ -0.27
USP11-204ENST00000377107 SLC25A3Q00325 362 aa13.34□□□□□ -0.27
USP11-204ENST00000377107 PRKD1Q15139 912 aaPredicted RBP13.34□□□□□ -0.27
USP11-204ENST00000377107 RAPH1Q70E73 1250 aa13.34□□□□□ -0.27
USP11-204ENST00000377107 TREML1Q86YW5 311 aa13.34□□□□□ -0.27
USP11-204ENST00000377107 TTC16Q8NEE8 873 aa13.34□□□□□ -0.27
USP11-204ENST00000377107 PPP4R1Q8TF05 950 aa13.34□□□□□ -0.27
USP11-204ENST00000377107 EDEM1Q92611 657 aa13.34□□□□□ -0.27
USP11-204ENST00000377107 ZNF669Q96BR6 464 aaPredicted RBP13.34□□□□□ -0.27
USP11-204ENST00000377107 EBNA1BP2Q99848 306 aaKnown RBP13.34□□□□□ -0.27
USP11-204ENST00000377107 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.34□□□□□ -0.27
USP11-204ENST00000377107 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.34□□□□□ -0.27
USP11-204ENST00000377107 DLGAP2Q9P1A6 1054 aa13.34□□□□□ -0.27
USP11-204ENST00000377107 PSAT1Q9Y617 370 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms