RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 IGHV1OR15-9A0A0B4J2B8 117 aa22.01■■□□□ 1.11
VSX1-201ENST00000376707 WASH3PC4AMC7 463 aa22.01■■□□□ 1.11
VSX1-201ENST00000376707 O00370 1275 aa22.01■■□□□ 1.11
VSX1-201ENST00000376707 CFIP05156 583 aa22.01■■□□□ 1.11
VSX1-201ENST00000376707 SETSIPP0DME0 302 aa22.01■■□□□ 1.11
VSX1-201ENST00000376707 HOXD12P35452 270 aa22.01■■□□□ 1.11
VSX1-201ENST00000376707 MORC3Q14149 939 aa22.01■■□□□ 1.11
VSX1-201ENST00000376707 STARD3Q14849 445 aa22.01■■□□□ 1.11
VSX1-201ENST00000376707 GEN1Q17RS7 908 aa22.01■■□□□ 1.11
VSX1-201ENST00000376707 TTI2Q6NXR4 508 aa22.01■■□□□ 1.11
VSX1-201ENST00000376707 KIAA1324Q6UXG2 1013 aaKnown RBP22.01■■□□□ 1.11
VSX1-201ENST00000376707 FMNL3Q8IVF7 1028 aa22.01■■□□□ 1.11
VSX1-201ENST00000376707 CPXM2Q8N436 756 aa22.01■■□□□ 1.11
VSX1-201ENST00000376707 UBR7Q8N806 425 aa22.01■■□□□ 1.11
VSX1-201ENST00000376707 DDI1Q8WTU0 396 aa22.01■■□□□ 1.11
VSX1-201ENST00000376707 UCMAQ8WVF2 138 aa22.01■■□□□ 1.11
VSX1-201ENST00000376707 NT5C1BQ96P26 610 aa22.01■■□□□ 1.11
VSX1-201ENST00000376707 STON1Q9Y6Q2 735 aa22.01■■□□□ 1.11
VSX1-201ENST00000376707 PPP1R3GB7ZBB8 358 aa22■■□□□ 1.11
VSX1-201ENST00000376707 NPC1O15118 1278 aa22■■□□□ 1.11
VSX1-201ENST00000376707 PMM2O15305 246 aa22■■□□□ 1.11
VSX1-201ENST00000376707 MAPK8P45983 427 aa22■■□□□ 1.11
VSX1-201ENST00000376707 HARS2P49590 506 aaKnown RBP22■■□□□ 1.11
VSX1-201ENST00000376707 ZNF33AQ06730 810 aa22■■□□□ 1.11
VSX1-201ENST00000376707 CETN1Q12798 172 aa22■■□□□ 1.11
VSX1-201ENST00000376707 SH3PXD2AQ5TCZ1 1133 aa22■■□□□ 1.11
VSX1-201ENST00000376707 PEAR1Q5VY43 1037 aaPredicted RBP22■■□□□ 1.11
VSX1-201ENST00000376707 BSPRYQ5W0U4 402 aa22■■□□□ 1.11
VSX1-201ENST00000376707 KLHL10Q6JEL2 608 aa22■■□□□ 1.11
VSX1-201ENST00000376707 SLC23A3Q6PIS1 610 aa22■■□□□ 1.11
VSX1-201ENST00000376707 TMEM270Q6UE05 265 aa22■■□□□ 1.11
VSX1-201ENST00000376707 BHLHA9Q7RTU4 235 aa22■■□□□ 1.11
VSX1-201ENST00000376707 ANKS1BQ7Z6G8 1248 aa22■■□□□ 1.11
VSX1-201ENST00000376707 CEP76Q8TAP6 659 aa22■■□□□ 1.11
VSX1-201ENST00000376707 EDEM1Q92611 657 aa22■■□□□ 1.11
VSX1-201ENST00000376707 MRGPRX1Q96LB2 322 aa22■■□□□ 1.11
VSX1-201ENST00000376707 SLC6A17Q9H1V8 727 aa22■■□□□ 1.11
VSX1-201ENST00000376707 HBS1LQ9Y450 684 aaKnown RBP22■■□□□ 1.11
VSX1-201ENST00000376707 PCDHB4Q9Y5E5 795 aa22■■□□□ 1.11
VSX1-201ENST00000376707 CNOT1A5YKK6 2376 aaKnown RBP21.99■■□□□ 1.11
VSX1-201ENST00000376707 MYO18AQ92614 2054 aaKnown RBP21.99■■□□□ 1.11
VSX1-201ENST00000376707 PAEPP09466 180 aa21.99■■□□□ 1.11
VSX1-201ENST00000376707 ENGP17813 658 aa21.99■■□□□ 1.11
VSX1-201ENST00000376707 E2F5Q15329 346 aa21.99■■□□□ 1.11
VSX1-201ENST00000376707 TRIP4Q15650 581 aaPredicted RBP21.99■■□□□ 1.11
VSX1-201ENST00000376707 DUOXA1Q1HG43 343 aa21.99■■□□□ 1.11
VSX1-201ENST00000376707 LCLAT1Q6UWP7 414 aa21.99■■□□□ 1.11
VSX1-201ENST00000376707 PPM1KQ8N3J5 372 aa21.99■■□□□ 1.11
VSX1-201ENST00000376707 KCTD13Q8WZ19 329 aa21.99■■□□□ 1.11
VSX1-201ENST00000376707 SLC2A11Q9BYW1 496 aa21.99■■□□□ 1.11
VSX1-201ENST00000376707 ABCC13Q9NSE7 274 aa21.99■■□□□ 1.11
VSX1-201ENST00000376707 THAP10Q9P2Z0 257 aaPredicted RBP21.99■■□□□ 1.11
VSX1-201ENST00000376707 SLC6A14Q9UN76 642 aa21.99■■□□□ 1.11
VSX1-201ENST00000376707 TPRP12270 2363 aaKnown RBP21.98■■□□□ 1.11
VSX1-201ENST00000376707 PLXND1Q9Y4D7 1925 aa21.98■■□□□ 1.11
VSX1-201ENST00000376707 ACACBO00763 2458 aa21.98■■□□□ 1.11
VSX1-201ENST00000376707 BICDL2A1A5D9 508 aa21.98■■□□□ 1.11
VSX1-201ENST00000376707 YJEFN3A6XGL0 299 aa21.98■■□□□ 1.11
VSX1-201ENST00000376707 E7ENQ6 273 aa21.98■■□□□ 1.11
VSX1-201ENST00000376707 GIPC1O14908 333 aa21.98■■□□□ 1.11
VSX1-201ENST00000376707 NDUFS2O75306 463 aa21.98■■□□□ 1.11
VSX1-201ENST00000376707 LCP1P13796 627 aa21.98■■□□□ 1.11
VSX1-201ENST00000376707 CSRP1P21291 193 aaKnown RBP21.98■■□□□ 1.11
VSX1-201ENST00000376707 IL12RB1P42701 662 aa21.98■■□□□ 1.11
VSX1-201ENST00000376707 ZNF132P52740 706 aa21.98■■□□□ 1.11
VSX1-201ENST00000376707 ATXN3P54252 364 aaPredicted RBP21.98■■□□□ 1.11
VSX1-201ENST00000376707 EIF4HQ15056 248 aaKnown RBP21.98■■□□□ 1.11
VSX1-201ENST00000376707 FUT11Q495W5 492 aa21.98■■□□□ 1.11
VSX1-201ENST00000376707 RABEPKQ7Z6M1 372 aa21.98■■□□□ 1.11
VSX1-201ENST00000376707 FAM217AQ8IXS0 508 aa21.98■■□□□ 1.11
VSX1-201ENST00000376707 NELFBQ8WX92 580 aa21.98■■□□□ 1.11
VSX1-201ENST00000376707 PIWIL1Q96J94 861 aaKnown RBP21.98■■□□□ 1.11
VSX1-201ENST00000376707 HSPA12BQ96MM6 686 aa21.98■■□□□ 1.11
VSX1-201ENST00000376707 CIPCQ9C0C6 399 aa21.98■■□□□ 1.11
VSX1-201ENST00000376707 CNGB3Q9NQW8 809 aa21.98■■□□□ 1.11
VSX1-201ENST00000376707 ELOVL2Q9NXB9 296 aa21.98■■□□□ 1.11
VSX1-201ENST00000376707 SFMBT1Q9UHJ3 866 aa21.98■■□□□ 1.11
VSX1-201ENST00000376707 SYNCRIPO60506 623 aaKnown RBP21.97■■□□□ 1.11
VSX1-201ENST00000376707 TSPAN3O60637 253 aa21.97■■□□□ 1.11
VSX1-201ENST00000376707 CEACAM1P13688 526 aa21.97■■□□□ 1.11
VSX1-201ENST00000376707 RGS7P49802 495 aa21.97■■□□□ 1.11
VSX1-201ENST00000376707 DAOAP59103 153 aa21.97■■□□□ 1.11
VSX1-201ENST00000376707 SHC2P98077 582 aa21.97■■□□□ 1.11
VSX1-201ENST00000376707 GFPT1Q06210 699 aaPredicted RBP21.97■■□□□ 1.11
VSX1-201ENST00000376707 ZNF252P-AS1Q0IIN9 211 aa21.97■■□□□ 1.11
VSX1-201ENST00000376707 PKDCCQ504Y2 493 aa21.97■■□□□ 1.11
VSX1-201ENST00000376707 MPPE1Q53F39 396 aa21.97■■□□□ 1.11
VSX1-201ENST00000376707 TRIML1Q8N9V2 468 aa21.97■■□□□ 1.11
VSX1-201ENST00000376707 TFAP2BQ92481 460 aa21.97■■□□□ 1.11
VSX1-201ENST00000376707 PRDM16Q9HAZ2 1276 aa21.97■■□□□ 1.11
VSX1-201ENST00000376707 CD93Q9NPY3 652 aa21.97■■□□□ 1.11
VSX1-201ENST00000376707 CLEC4EQ9ULY5 219 aa21.97■■□□□ 1.11
VSX1-201ENST00000376707 LAMA1P25391 3075 aa21.96■■□□□ 1.11
VSX1-201ENST00000376707 M0QYV0 167 aa21.96■■□□□ 1.11
VSX1-201ENST00000376707 P4HA2O15460 535 aa21.96■■□□□ 1.11
VSX1-201ENST00000376707 SERPINF2P08697 491 aa21.96■■□□□ 1.11
VSX1-201ENST00000376707 ZNF445P59923 1031 aa21.96■■□□□ 1.11
VSX1-201ENST00000376707 ARID5AQ03989 594 aa21.96■■□□□ 1.11
VSX1-201ENST00000376707 STILQ15468 1287 aa21.96■■□□□ 1.11
VSX1-201ENST00000376707 CNGA2Q16280 664 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms