RNA–Protein interactions for RNA: ENST00000375820.8

COL4A1-201, Transcript of collagen type IV alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A1, Length 6,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-201ENST00000375820 IZUMO1Q8IYV9 350 aa14.06□□□□□ -0.16
COL4A1-201ENST00000375820 MIEF2Q96C03 454 aa14.06□□□□□ -0.16
COL4A1-201ENST00000375820 RIBC2Q9H4K1 309 aa14.06□□□□□ -0.16
COL4A1-201ENST00000375820 CISHQ9NSE2 258 aa14.06□□□□□ -0.16
COL4A1-201ENST00000375820 VPS9D1Q9Y2B5 631 aa14.06□□□□□ -0.16
COL4A1-201ENST00000375820 TK2O00142 265 aa14.06□□□□□ -0.16
COL4A1-201ENST00000375820 VDRP11473 427 aa14.06□□□□□ -0.16
COL4A1-201ENST00000375820 PKN1Q16512 942 aa14.06□□□□□ -0.16
COL4A1-201ENST00000375820 FNDC5Q8NAU1 212 aa14.06□□□□□ -0.16
COL4A1-201ENST00000375820 OSBPL6Q9BZF3 934 aa14.06□□□□□ -0.16
COL4A1-201ENST00000375820 SEMA6BQ9H3T3 888 aa14.06□□□□□ -0.16
COL4A1-201ENST00000375820 RGS18Q9NS28 235 aa14.06□□□□□ -0.16
COL4A1-201ENST00000375820 RBM22Q9NW64 420 aaKnown RBP eCLIP14.06□□□□□ -0.16
COL4A1-201ENST00000375820 TRPM5Q9NZQ8 1165 aa14.06□□□□□ -0.16
COL4A1-201ENST00000375820 PLA2G4CQ9UP65 541 aa14.06□□□□□ -0.16
COL4A1-201ENST00000375820 H3BN98 237 aa14.06□□□□□ -0.16
COL4A1-201ENST00000375820 HS6ST1O60243 411 aa14.06□□□□□ -0.16
COL4A1-201ENST00000375820 ATP9AO75110 1047 aa14.06□□□□□ -0.16
COL4A1-201ENST00000375820 CRTAMO95727 393 aa14.06□□□□□ -0.16
COL4A1-201ENST00000375820 THP07101 528 aa14.06□□□□□ -0.16
COL4A1-201ENST00000375820 MAPK1P28482 360 aa14.06□□□□□ -0.16
COL4A1-201ENST00000375820 SLC1A6P48664 564 aa14.06□□□□□ -0.16
COL4A1-201ENST00000375820 TMEM26Q6ZUK4 368 aa14.06□□□□□ -0.16
COL4A1-201ENST00000375820 PTGES3LE9PB15 166 aa14.06□□□□□ -0.16
COL4A1-201ENST00000375820 PQBP1O60828 265 aaKnown RBP14.06□□□□□ -0.16
COL4A1-201ENST00000375820 ATG7O95352 703 aa14.06□□□□□ -0.16
COL4A1-201ENST00000375820 CALCAP01258 141 aa14.06□□□□□ -0.16
COL4A1-201ENST00000375820 ICAM1P05362 532 aa14.06□□□□□ -0.16
COL4A1-201ENST00000375820 PSMA3P25788 255 aa14.06□□□□□ -0.16
COL4A1-201ENST00000375820 MGAT1P26572 445 aa14.06□□□□□ -0.16
COL4A1-201ENST00000375820 MRPS35P82673 323 aaKnown RBP14.06□□□□□ -0.16
COL4A1-201ENST00000375820 ADIGQ0VDE8 80 aa14.06□□□□□ -0.16
COL4A1-201ENST00000375820 MPP3Q13368 585 aa14.06□□□□□ -0.16
COL4A1-201ENST00000375820 CNGA2Q16280 664 aa14.06□□□□□ -0.16
COL4A1-201ENST00000375820 TSGA10IPQ3SY00 556 aa14.06□□□□□ -0.16
COL4A1-201ENST00000375820 RNF44Q7L0R7 432 aa14.06□□□□□ -0.16
COL4A1-201ENST00000375820 RNASE11Q8TAA1 199 aaKnown RBP14.06□□□□□ -0.16
COL4A1-201ENST00000375820 DTNBP1Q96EV8 351 aa14.06□□□□□ -0.16
COL4A1-201ENST00000375820 PRMT6Q96LA8 375 aaPredicted RBP14.06□□□□□ -0.16
COL4A1-201ENST00000375820 TAGLN3Q9UI15 199 aa14.06□□□□□ -0.16
COL4A1-201ENST00000375820 GTF3C4Q9UKN8 822 aa14.06□□□□□ -0.16
COL4A1-201ENST00000375820 POLR1DQ9Y2S0 133 aa14.06□□□□□ -0.16
COL4A1-201ENST00000375820 INPP4BO15327 924 aa14.06□□□□□ -0.16
COL4A1-201ENST00000375820 CNOT3O75175 753 aaKnown RBP14.06□□□□□ -0.16
COL4A1-201ENST00000375820 PEX5P50542 639 aa14.06□□□□□ -0.16
COL4A1-201ENST00000375820 N4BP2L1Q5TBK1 243 aaPredicted RBP14.06□□□□□ -0.16
COL4A1-201ENST00000375820 BTN2A1Q7KYR7 527 aa14.06□□□□□ -0.16
COL4A1-201ENST00000375820 DDX18Q9NVP1 670 aaKnown RBP14.06□□□□□ -0.16
COL4A1-201ENST00000375820 C1orf232A0A0U1RR37 186 aa14.05□□□□□ -0.16
COL4A1-201ENST00000375820 TIMM44O43615 452 aa14.05□□□□□ -0.16
COL4A1-201ENST00000375820 ITGA9Q13797 1035 aa14.05□□□□□ -0.16
COL4A1-201ENST00000375820 INAQ16352 499 aa14.05□□□□□ -0.16
COL4A1-201ENST00000375820 TMC7Q7Z402 723 aa14.05□□□□□ -0.16
COL4A1-201ENST00000375820 MYCBPAPQ8TBZ2 947 aa14.05□□□□□ -0.16
COL4A1-201ENST00000375820 DNAJB3Q8WWF6 145 aa14.05□□□□□ -0.16
COL4A1-201ENST00000375820 TMEM176AQ96HP8 235 aa14.05□□□□□ -0.16
COL4A1-201ENST00000375820 PPCSQ9HAB8 311 aa14.05□□□□□ -0.16
COL4A1-201ENST00000375820 TMBIM4Q9HC24 238 aa14.05□□□□□ -0.16
COL4A1-201ENST00000375820 ARMCX1Q9P291 453 aa14.05□□□□□ -0.16
COL4A1-201ENST00000375820 PRKAG3Q9UGI9 489 aa14.05□□□□□ -0.16
COL4A1-201ENST00000375820 DAPK2Q9UIK4 370 aa14.05□□□□□ -0.16
COL4A1-201ENST00000375820 CHURC1-FNTBB4DL54 471 aa14.05□□□□□ -0.16
COL4A1-201ENST00000375820 TRIM24O15164 1050 aa14.05□□□□□ -0.16
COL4A1-201ENST00000375820 UBOX5O94941 541 aa14.05□□□□□ -0.16
COL4A1-201ENST00000375820 EPHB3P54753 998 aa14.05□□□□□ -0.16
COL4A1-201ENST00000375820 CRB1P82279 1406 aa14.05□□□□□ -0.16
COL4A1-201ENST00000375820 CCNIQ14094 377 aa14.05□□□□□ -0.16
COL4A1-201ENST00000375820 ANKRD13AQ8IZ07 590 aa14.05□□□□□ -0.16
COL4A1-201ENST00000375820 IFRD1O00458 451 aaPredicted RBP14.05□□□□□ -0.16
COL4A1-201ENST00000375820 DMPKQ09013 629 aa14.05□□□□□ -0.16
COL4A1-201ENST00000375820 TLK2Q86UE8 772 aa14.05□□□□□ -0.16
COL4A1-201ENST00000375820 UCMAQ8WVF2 138 aa14.05□□□□□ -0.16
COL4A1-201ENST00000375820 TRAPPC12Q8WVT3 735 aa14.05□□□□□ -0.16
COL4A1-201ENST00000375820 CLIP3Q96DZ5 547 aa14.05□□□□□ -0.16
COL4A1-201ENST00000375820 UBDO15205 165 aa14.05□□□□□ -0.16
COL4A1-201ENST00000375820 SEC22BO75396 215 aa14.05□□□□□ -0.16
COL4A1-201ENST00000375820 HSPA13P48723 471 aa14.05□□□□□ -0.16
COL4A1-201ENST00000375820 ANXA11P50995 505 aaKnown RBP14.05□□□□□ -0.16
COL4A1-201ENST00000375820 KPNA1P52294 538 aaPredicted RBP14.05□□□□□ -0.16
COL4A1-201ENST00000375820 BCAT1P54687 386 aa14.05□□□□□ -0.16
COL4A1-201ENST00000375820 PCNX4Q63HM2 1172 aa14.05□□□□□ -0.16
COL4A1-201ENST00000375820 KLHL17Q6TDP4 642 aa14.05□□□□□ -0.16
COL4A1-201ENST00000375820 ZNF571Q7Z3V5 609 aaPredicted RBP14.05□□□□□ -0.16
COL4A1-201ENST00000375820 HIC2Q96JB3 615 aa14.05□□□□□ -0.16
COL4A1-201ENST00000375820 DPY30Q9C005 99 aa14.05□□□□□ -0.16
COL4A1-201ENST00000375820 MID1IP1Q9NPA3 183 aa14.05□□□□□ -0.16
COL4A1-201ENST00000375820 SNTNA6NMZ2 147 aa14.05□□□□□ -0.16
COL4A1-201ENST00000375820 DNALI1O14645 258 aaPredicted RBP14.05□□□□□ -0.16
COL4A1-201ENST00000375820 SUPT20HL2P0C7V6 817 aa14.05□□□□□ -0.16
COL4A1-201ENST00000375820 ITPK1Q13572 414 aa14.05□□□□□ -0.16
COL4A1-201ENST00000375820 GIT2Q14161 759 aa14.05□□□□□ -0.16
COL4A1-201ENST00000375820 KDM7AQ6ZMT4 941 aa14.05□□□□□ -0.16
COL4A1-201ENST00000375820 IPCEF1Q8WWN9 437 aaPredicted RBP14.05□□□□□ -0.16
COL4A1-201ENST00000375820 BATF3Q9NR55 127 aa14.05□□□□□ -0.16
COL4A1-201ENST00000375820 CRYL1Q9Y2S2 319 aa14.05□□□□□ -0.16
COL4A1-201ENST00000375820 ARHGAP31Q2M1Z3 1444 aa14.04□□□□□ -0.16
COL4A1-201ENST00000375820 CCDC130P13994 396 aa14.04□□□□□ -0.16
COL4A1-201ENST00000375820 FMO4P31512 558 aa14.04□□□□□ -0.16
COL4A1-201ENST00000375820 SREBF2Q12772 1141 aa14.04□□□□□ -0.16
COL4A1-201ENST00000375820 NFIAQ12857 509 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms