RNA–Protein interactions for RNA: ENST00000375759.7

SPEN-201, Transcript of spen family transcriptional repressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPEN, Length 12,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-201ENST00000375759 SH2D3AQ9BRG2 576 aa10.09□□□□□ -0.79
SPEN-201ENST00000375759 EMILIN2Q9BXX0 1053 aa10.09□□□□□ -0.79
SPEN-201ENST00000375759 ANKZF1Q9H8Y5 726 aa10.09□□□□□ -0.79
SPEN-201ENST00000375759 ZCCHC11Q5TAX3 1644 aaKnown RBP10.09□□□□□ -0.79
SPEN-201ENST00000375759 HBP1O60381 514 aa10.09□□□□□ -0.79
SPEN-201ENST00000375759 HPGDP15428 266 aa10.09□□□□□ -0.79
SPEN-201ENST00000375759 NOS3P29474 1203 aa10.09□□□□□ -0.79
SPEN-201ENST00000375759 MAPKAPK2P49137 400 aa10.09□□□□□ -0.79
SPEN-201ENST00000375759 EFCAB12Q6NXP0 572 aa10.09□□□□□ -0.79
SPEN-201ENST00000375759 GJB7Q6PEY0 223 aa10.09□□□□□ -0.79
SPEN-201ENST00000375759 ZNF438Q7Z4V0 828 aa10.09□□□□□ -0.79
SPEN-201ENST00000375759 LNPEPQ9UIQ6 1025 aa10.09□□□□□ -0.79
SPEN-201ENST00000375759 TBC1D12O60347 775 aa10.08□□□□□ -0.8
SPEN-201ENST00000375759 NDUFB10O96000 172 aa10.08□□□□□ -0.8
SPEN-201ENST00000375759 ANKS6Q68DC2 871 aa10.08□□□□□ -0.8
SPEN-201ENST00000375759 GLB1LQ6UWU2 654 aa10.08□□□□□ -0.8
SPEN-201ENST00000375759 ARHGEF19Q8IW93 802 aa10.08□□□□□ -0.8
SPEN-201ENST00000375759 SP8Q8IXZ3 490 aa10.08□□□□□ -0.8
SPEN-201ENST00000375759 ASB2Q96Q27 587 aa10.08□□□□□ -0.8
SPEN-201ENST00000375759 SLITRK2Q9H156 845 aa10.08□□□□□ -0.8
SPEN-201ENST00000375759 NRDE2Q9H7Z3 1164 aa10.08□□□□□ -0.8
SPEN-201ENST00000375759 KCNH4Q9UQ05 1017 aa10.08□□□□□ -0.8
SPEN-201ENST00000375759 SNAP23O00161 211 aa10.08□□□□□ -0.8
SPEN-201ENST00000375759 JAK1P23458 1154 aa10.08□□□□□ -0.8
SPEN-201ENST00000375759 BCAT1P54687 386 aa10.08□□□□□ -0.8
SPEN-201ENST00000375759 FRG1Q14331 258 aaKnown RBP10.08□□□□□ -0.8
SPEN-201ENST00000375759 KYAT3Q6YP21 454 aaKnown RBP10.08□□□□□ -0.8
SPEN-201ENST00000375759 RIPOR1Q6ZS17 1223 aa10.08□□□□□ -0.8
SPEN-201ENST00000375759 ATG9AQ7Z3C6 839 aa10.08□□□□□ -0.8
SPEN-201ENST00000375759 AHI1Q8N157 1196 aa10.08□□□□□ -0.8
SPEN-201ENST00000375759 GTF3C2Q8WUA4 911 aaPredicted RBP10.08□□□□□ -0.8
SPEN-201ENST00000375759 FIG4Q92562 907 aa10.08□□□□□ -0.8
SPEN-201ENST00000375759 SEPHS2Q99611 448 aa10.08□□□□□ -0.8
SPEN-201ENST00000375759 CCNA2P20248 432 aa10.08□□□□□ -0.8
SPEN-201ENST00000375759 HERVK_113P62684 666 aa10.08□□□□□ -0.8
SPEN-201ENST00000375759 TMEM132CQ8N3T6 1108 aa10.08□□□□□ -0.8
SPEN-201ENST00000375759 MSH3P20585 1137 aa10.08□□□□□ -0.8
SPEN-201ENST00000375759 STAT5AP42229 794 aa10.08□□□□□ -0.8
SPEN-201ENST00000375759 SLC20A1Q8WUM9 679 aa10.08□□□□□ -0.8
SPEN-201ENST00000375759 EPB41L4BQ9H329 900 aa10.08□□□□□ -0.8
SPEN-201ENST00000375759 ZNF624Q9P2J8 865 aaPredicted RBP10.08□□□□□ -0.8
SPEN-201ENST00000375759 NPHP4O75161 1426 aaPredicted RBP10.08□□□□□ -0.8
SPEN-201ENST00000375759 DDHD2O94830 711 aa10.08□□□□□ -0.8
SPEN-201ENST00000375759 MGAT5BQ3V5L5 792 aa10.08□□□□□ -0.8
SPEN-201ENST00000375759 EPC2Q52LR7 807 aa10.08□□□□□ -0.8
SPEN-201ENST00000375759 ZNF772Q68DY9 489 aaPredicted RBP10.08□□□□□ -0.8
SPEN-201ENST00000375759 SYTL1Q8IYJ3 562 aa10.08□□□□□ -0.8
SPEN-201ENST00000375759 SYNE4Q8N205 404 aa10.08□□□□□ -0.8
SPEN-201ENST00000375759 OVOS2A0A0G2JMS6 1433 aa10.08□□□□□ -0.8
SPEN-201ENST00000375759 OVOS2A0A0J9YW53 1432 aa10.08□□□□□ -0.8
SPEN-201ENST00000375759 OVOS2Q6IE36 1432 aa10.08□□□□□ -0.8
SPEN-201ENST00000375759 BIRC5O15392 142 aa10.08□□□□□ -0.8
SPEN-201ENST00000375759 GLI1P08151 1106 aa10.08□□□□□ -0.8
SPEN-201ENST00000375759 GRK4P32298 578 aa10.08□□□□□ -0.8
SPEN-201ENST00000375759 PKN1Q16512 942 aa10.08□□□□□ -0.8
SPEN-201ENST00000375759 MACC1Q6ZN28 852 aa10.08□□□□□ -0.8
SPEN-201ENST00000375759 CENPIQ92674 756 aaPredicted RBP10.08□□□□□ -0.8
SPEN-201ENST00000375759 GPRASP2Q96D09 838 aa10.08□□□□□ -0.8
SPEN-201ENST00000375759 CPNE1Q99829 537 aa10.08□□□□□ -0.8
SPEN-201ENST00000375759 TBC1D13Q9NVG8 400 aa10.08□□□□□ -0.8
SPEN-201ENST00000375759 AHSPQ9NZD4 102 aa10.08□□□□□ -0.8
SPEN-201ENST00000375759 RAB21Q9UL25 225 aa10.08□□□□□ -0.8
SPEN-201ENST00000375759 PRR12Q9ULL5 1215 aa10.08□□□□□ -0.8
SPEN-201ENST00000375759 AHCYL1O43865 530 aa10.08□□□□□ -0.8
SPEN-201ENST00000375759 IRF1P10914 325 aa10.08□□□□□ -0.8
SPEN-201ENST00000375759 DENND6AQ8IWF6 608 aa10.08□□□□□ -0.8
SPEN-201ENST00000375759 DHRSXQ8N5I4 330 aa10.08□□□□□ -0.8
SPEN-201ENST00000375759 ACSF2Q96CM8 615 aaPredicted RBP10.08□□□□□ -0.8
SPEN-201ENST00000375759 NUAK2Q9H093 628 aa10.08□□□□□ -0.8
SPEN-201ENST00000375759 MYH11P35749 1972 aa10.08□□□□□ -0.8
SPEN-201ENST00000375759 MYH3P11055 1940 aa10.08□□□□□ -0.8
SPEN-201ENST00000375759 RRN3P2A6NIE6 340 aa10.08□□□□□ -0.8
SPEN-201ENST00000375759 F5H5T6 163 aa10.08□□□□□ -0.8
SPEN-201ENST00000375759 MTRF1O75570 445 aaKnown RBP10.08□□□□□ -0.8
SPEN-201ENST00000375759 SCARF1Q14162 830 aa10.08□□□□□ -0.8
SPEN-201ENST00000375759 GSTA3Q16772 222 aa10.08□□□□□ -0.8
SPEN-201ENST00000375759 YTHDF3Q7Z739 585 aaKnown RBP10.08□□□□□ -0.8
SPEN-201ENST00000375759 UXS1Q8NBZ7 420 aa10.08□□□□□ -0.8
SPEN-201ENST00000375759 SLC25A13Q9UJS0 675 aa10.08□□□□□ -0.8
SPEN-201ENST00000375759 AKAP5P24588 427 aa10.08□□□□□ -0.8
SPEN-201ENST00000375759 CSNK2BP67870 215 aa10.08□□□□□ -0.8
SPEN-201ENST00000375759 ULK2Q8IYT8 1036 aa10.08□□□□□ -0.8
SPEN-201ENST00000375759 SORCS3Q9UPU3 1222 aa10.08□□□□□ -0.8
SPEN-201ENST00000375759 MADDQ8WXG6 1647 aa10.08□□□□□ -0.8
SPEN-201ENST00000375759 H3BQF6 201 aa10.07□□□□□ -0.8
SPEN-201ENST00000375759 FCHO1O14526 889 aa10.07□□□□□ -0.8
SPEN-201ENST00000375759 HS6ST1O60243 411 aa10.07□□□□□ -0.8
SPEN-201ENST00000375759 SGPL1O95470 568 aa10.07□□□□□ -0.8
SPEN-201ENST00000375759 ADHFE1Q8IWW8 467 aa10.07□□□□□ -0.8
SPEN-201ENST00000375759 NYAP2Q9P242 653 aa10.07□□□□□ -0.8
SPEN-201ENST00000375759 HMGCS2P54868 508 aa10.07□□□□□ -0.8
SPEN-201ENST00000375759 NAB1Q13506 487 aa10.07□□□□□ -0.8
SPEN-201ENST00000375759 BAATQ14032 418 aaPredicted RBP10.07□□□□□ -0.8
SPEN-201ENST00000375759 ECDO95905 644 aaPredicted RBP10.07□□□□□ -0.8
SPEN-201ENST00000375759 TOP3AQ13472 1001 aaPredicted RBP10.07□□□□□ -0.8
SPEN-201ENST00000375759 ZSWIM7Q19AV6 140 aa10.07□□□□□ -0.8
SPEN-201ENST00000375759 OTUD5Q96G74 571 aa10.07□□□□□ -0.8
SPEN-201ENST00000375759 GSTK1Q9Y2Q3 226 aa10.07□□□□□ -0.8
SPEN-201ENST00000375759 FBXO21O94952 628 aa10.07□□□□□ -0.8
SPEN-201ENST00000375759 CHN2P52757 468 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms