RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 IMPG2Q9BZV3 1241 aa12.8□□□□□ -0.36
LSM2-208ENST00000375661 NIF3L1Q9GZT8 377 aa12.8□□□□□ -0.36
LSM2-208ENST00000375661 INTS2Q9H0H0 1204 aaKnown RBP12.8□□□□□ -0.36
LSM2-208ENST00000375661 FAM124BQ9H5Z6 455 aaPredicted RBP12.8□□□□□ -0.36
LSM2-208ENST00000375661 SPHK2Q9NRA0 654 aa12.8□□□□□ -0.36
LSM2-208ENST00000375661 CALCOCO1Q9P1Z2 691 aa12.8□□□□□ -0.36
LSM2-208ENST00000375661 AKAP13Q12802 2813 aa12.8□□□□□ -0.36
LSM2-208ENST00000375661 CACNA1EQ15878 2313 aa12.8□□□□□ -0.36
LSM2-208ENST00000375661 ASPMQ8IZT6 3477 aa12.8□□□□□ -0.36
LSM2-208ENST00000375661 PKD1L2Q7Z442 2459 aa12.8□□□□□ -0.36
LSM2-208ENST00000375661 PLXNB3Q9ULL4 1909 aa12.8□□□□□ -0.36
LSM2-208ENST00000375661 PTPRBP23467 1997 aa12.8□□□□□ -0.36
LSM2-208ENST00000375661 IGHV1OR15-9A0A0B4J2B8 117 aa12.79□□□□□ -0.36
LSM2-208ENST00000375661 GTPBP10A4D1E9 387 aaKnown RBP12.79□□□□□ -0.36
LSM2-208ENST00000375661 TAF4O00268 1085 aa12.79□□□□□ -0.36
LSM2-208ENST00000375661 SCAMP3O14828 347 aaKnown RBP12.79□□□□□ -0.36
LSM2-208ENST00000375661 CLSTN1O94985 981 aa12.79□□□□□ -0.36
LSM2-208ENST00000375661 CAPNS1P04632 268 aa12.79□□□□□ -0.36
LSM2-208ENST00000375661 CD59P13987 128 aa12.79□□□□□ -0.36
LSM2-208ENST00000375661 SLC9A1P19634 815 aa12.79□□□□□ -0.36
LSM2-208ENST00000375661 CACNA2D1P54289 1103 aa12.79□□□□□ -0.36
LSM2-208ENST00000375661 APBA1Q02410 837 aa12.79□□□□□ -0.36
LSM2-208ENST00000375661 IFRD2Q12894 506 aaPredicted RBP12.79□□□□□ -0.36
LSM2-208ENST00000375661 C10orf76Q5T2E6 689 aa12.79□□□□□ -0.36
LSM2-208ENST00000375661 SDE2Q6IQ49 451 aa12.79□□□□□ -0.36
LSM2-208ENST00000375661 GBP6Q6ZN66 633 aa12.79□□□□□ -0.36
LSM2-208ENST00000375661 GAS2L3Q86XJ1 694 aa12.79□□□□□ -0.36
LSM2-208ENST00000375661 CHCHD4Q8N4Q1 142 aa12.79□□□□□ -0.36
LSM2-208ENST00000375661 B3GALNT2Q8NCR0 500 aa12.79□□□□□ -0.36
LSM2-208ENST00000375661 CCDC150Q8NCX0 1101 aa12.79□□□□□ -0.36
LSM2-208ENST00000375661 RNF214Q8ND24 703 aa12.79□□□□□ -0.36
LSM2-208ENST00000375661 ADAMTS14Q8WXS8 1223 aa12.79□□□□□ -0.36
LSM2-208ENST00000375661 ZNF419Q96HQ0 510 aaPredicted RBP12.79□□□□□ -0.36
LSM2-208ENST00000375661 FAXDC2Q96IV6 333 aa12.79□□□□□ -0.36
LSM2-208ENST00000375661 B3GNT5Q9BYG0 378 aa12.79□□□□□ -0.36
LSM2-208ENST00000375661 ZDHHC5Q9C0B5 715 aa12.79□□□□□ -0.36
LSM2-208ENST00000375661 ZNF518BQ9C0D4 1074 aa12.79□□□□□ -0.36
LSM2-208ENST00000375661 ZDHHC4Q9NPG8 344 aa12.79□□□□□ -0.36
LSM2-208ENST00000375661 IL37Q9NZH6 218 aa12.79□□□□□ -0.36
LSM2-208ENST00000375661 A0A1W2PQF6 199 aa12.78□□□□□ -0.36
LSM2-208ENST00000375661 FAM92AA1XBS5 289 aa12.78□□□□□ -0.36
LSM2-208ENST00000375661 LGALS16A8MUM7 142 aa12.78□□□□□ -0.36
LSM2-208ENST00000375661 A8MXQ7 604 aa12.78□□□□□ -0.36
LSM2-208ENST00000375661 GFRA2O00451 464 aa12.78□□□□□ -0.36
LSM2-208ENST00000375661 CACNG3O60359 315 aa12.78□□□□□ -0.36
LSM2-208ENST00000375661 GJB3O75712 270 aa12.78□□□□□ -0.36
LSM2-208ENST00000375661 ZDHHC11BP0C7U3 371 aa12.78□□□□□ -0.36
LSM2-208ENST00000375661 P4HA1P13674 534 aa12.78□□□□□ -0.36
LSM2-208ENST00000375661 GNSP15586 552 aa12.78□□□□□ -0.36
LSM2-208ENST00000375661 PON1P27169 355 aa12.78□□□□□ -0.36
LSM2-208ENST00000375661 TRIP6Q15654 476 aaKnown RBP12.78□□□□□ -0.36
LSM2-208ENST00000375661 EXOC3L4Q17RC7 722 aa12.78□□□□□ -0.36
LSM2-208ENST00000375661 ANO4Q32M45 955 aa12.78□□□□□ -0.36
LSM2-208ENST00000375661 SYCP2LQ5T4T6 812 aa12.78□□□□□ -0.36
LSM2-208ENST00000375661 GRAMD4Q6IC98 578 aa12.78□□□□□ -0.36
LSM2-208ENST00000375661 TRIM65Q6PJ69 517 aa12.78□□□□□ -0.36
LSM2-208ENST00000375661 SLC41A1Q8IVJ1 513 aa12.78□□□□□ -0.36
LSM2-208ENST00000375661 ARHGEF19Q8IW93 802 aa12.78□□□□□ -0.36
LSM2-208ENST00000375661 BBS7Q8IWZ6 715 aa12.78□□□□□ -0.36
LSM2-208ENST00000375661 UBR7Q8N806 425 aa12.78□□□□□ -0.36
LSM2-208ENST00000375661 NAT16Q8N8M0 369 aa12.78□□□□□ -0.36
LSM2-208ENST00000375661 ANKRD20A12PQ8NF67 263 aa12.78□□□□□ -0.36
LSM2-208ENST00000375661 IPO4Q8TEX9 1081 aaKnown RBP12.78□□□□□ -0.36
LSM2-208ENST00000375661 FOXJ1Q92949 421 aa12.78□□□□□ -0.36
LSM2-208ENST00000375661 KAT5Q92993 513 aa12.78□□□□□ -0.36
LSM2-208ENST00000375661 NT5C1BQ96P26 610 aa12.78□□□□□ -0.36
LSM2-208ENST00000375661 XPO6Q96QU8 1125 aaKnown RBP12.78□□□□□ -0.36
LSM2-208ENST00000375661 ARID3AQ99856 593 aa12.78□□□□□ -0.36
LSM2-208ENST00000375661 DPEP3Q9H4B8 488 aa12.78□□□□□ -0.36
LSM2-208ENST00000375661 CYP3A43Q9HB55 503 aa12.78□□□□□ -0.36
LSM2-208ENST00000375661 CD248Q9HCU0 757 aa12.78□□□□□ -0.36
LSM2-208ENST00000375661 SIX2Q9NPC8 291 aa12.78□□□□□ -0.36
LSM2-208ENST00000375661 FSCN3Q9NQT6 498 aa12.78□□□□□ -0.36
LSM2-208ENST00000375661 TMEM30AQ9NV96 361 aa12.78□□□□□ -0.36
LSM2-208ENST00000375661 PCDHB9Q9Y5E1 797 aa12.78□□□□□ -0.36
LSM2-208ENST00000375661 GOLGA6L19H0YKK7 550 aa12.77□□□□□ -0.37
LSM2-208ENST00000375661 CLDN5O00501 218 aa12.77□□□□□ -0.37
LSM2-208ENST00000375661 PES1O00541 588 aaKnown RBP12.77□□□□□ -0.37
LSM2-208ENST00000375661 TEX33O43247 280 aa12.77□□□□□ -0.37
LSM2-208ENST00000375661 NDUFV2P19404 249 aa12.77□□□□□ -0.37
LSM2-208ENST00000375661 SLC5A3P53794 718 aa12.77□□□□□ -0.37
LSM2-208ENST00000375661 FAM193AP78312 1265 aa12.77□□□□□ -0.37
LSM2-208ENST00000375661 INCA1Q0VD86 236 aa12.77□□□□□ -0.37
LSM2-208ENST00000375661 CUL2Q13617 745 aa12.77□□□□□ -0.37
LSM2-208ENST00000375661 PLEKHG6Q3KR16 790 aa12.77□□□□□ -0.37
LSM2-208ENST00000375661 WDR45BQ5MNZ6 344 aa12.77□□□□□ -0.37
LSM2-208ENST00000375661 GJB7Q6PEY0 223 aa12.77□□□□□ -0.37
LSM2-208ENST00000375661 HTR3DQ70Z44 454 aa12.77□□□□□ -0.37
LSM2-208ENST00000375661 RRAGAQ7L523 313 aa12.77□□□□□ -0.37
LSM2-208ENST00000375661 GLRX5Q86SX6 157 aa12.77□□□□□ -0.37
LSM2-208ENST00000375661 TMEM25Q86YD3 366 aa12.77□□□□□ -0.37
LSM2-208ENST00000375661 SMARCD1Q96GM5 515 aa12.77□□□□□ -0.37
LSM2-208ENST00000375661 TNIP3Q96KP6 325 aa12.77□□□□□ -0.37
LSM2-208ENST00000375661 HSPA12BQ96MM6 686 aa12.77□□□□□ -0.37
LSM2-208ENST00000375661 KREMEN1Q96MU8 473 aa12.77□□□□□ -0.37
LSM2-208ENST00000375661 NAP1L5Q96NT1 182 aaPredicted RBP12.77□□□□□ -0.37
LSM2-208ENST00000375661 TWNKQ96RR1 684 aa12.77□□□□□ -0.37
LSM2-208ENST00000375661 GABRG3Q99928 467 aa12.77□□□□□ -0.37
LSM2-208ENST00000375661 NACA2Q9H009 215 aa12.77□□□□□ -0.37
LSM2-208ENST00000375661 RBSNQ9H1K0 784 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms