RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 PKN3Q6P5Z2 889 aa10.46□□□□□ -0.74
PTCH1-204ENST00000375290 FAM71DQ8N9W8 422 aa10.46□□□□□ -0.74
PTCH1-204ENST00000375290 FAM84BQ96KN1 310 aaPredicted RBP10.46□□□□□ -0.74
PTCH1-204ENST00000375290 RTKNQ9BST9 563 aa10.46□□□□□ -0.74
PTCH1-204ENST00000375290 ERAP1Q9NZ08 941 aa10.46□□□□□ -0.74
PTCH1-204ENST00000375290 DSEQ9UL01 958 aa10.46□□□□□ -0.74
PTCH1-204ENST00000375290 PABPC1P11940 636 aaKnown RBP10.46□□□□□ -0.74
PTCH1-204ENST00000375290 SPOCD1Q6ZMY3 1216 aa10.46□□□□□ -0.74
PTCH1-204ENST00000375290 PIGUQ9H490 435 aa10.46□□□□□ -0.74
PTCH1-204ENST00000375290 RPAP3Q9H6T3 665 aaPredicted RBP10.46□□□□□ -0.74
PTCH1-204ENST00000375290 CASS4Q9NQ75 786 aa10.46□□□□□ -0.74
PTCH1-204ENST00000375290 ING4Q9UNL4 249 aa10.46□□□□□ -0.74
PTCH1-204ENST00000375290 SLC30A1Q9Y6M5 507 aa10.46□□□□□ -0.74
PTCH1-204ENST00000375290 FOXN3O00409 490 aaPredicted RBP10.46□□□□□ -0.74
PTCH1-204ENST00000375290 PRKCBP05771 671 aa10.46□□□□□ -0.74
PTCH1-204ENST00000375290 SQLEQ14534 574 aa10.46□□□□□ -0.74
PTCH1-204ENST00000375290 PDK3Q15120 406 aa10.46□□□□□ -0.74
PTCH1-204ENST00000375290 NFIL3Q16649 462 aa10.46□□□□□ -0.74
PTCH1-204ENST00000375290 STRIP1Q5VSL9 837 aa10.46□□□□□ -0.74
PTCH1-204ENST00000375290 RSBN1Q5VWQ0 802 aaPredicted RBP10.46□□□□□ -0.74
PTCH1-204ENST00000375290 PMF1Q6P1K2 205 aa10.46□□□□□ -0.74
PTCH1-204ENST00000375290 TSHZ1Q6ZSZ6 1077 aa10.46□□□□□ -0.74
PTCH1-204ENST00000375290 CAMKK2Q96RR4 588 aa10.46□□□□□ -0.74
PTCH1-204ENST00000375290 DRD4P21917 467 aa10.45□□□□□ -0.74
PTCH1-204ENST00000375290 FAM196AQ6ZSG2 479 aa10.45□□□□□ -0.74
PTCH1-204ENST00000375290 ZNF571Q7Z3V5 609 aaPredicted RBP10.45□□□□□ -0.74
PTCH1-204ENST00000375290 PROSER1Q86XN7 944 aa10.45□□□□□ -0.74
PTCH1-204ENST00000375290 TBCCD1Q9NVR7 557 aa10.45□□□□□ -0.74
PTCH1-204ENST00000375290 ING3Q9NXR8 418 aa10.45□□□□□ -0.74
PTCH1-204ENST00000375290 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.45□□□□□ -0.74
PTCH1-204ENST00000375290 MORF4L1Q9UBU8 362 aa10.45□□□□□ -0.74
PTCH1-204ENST00000375290 RPS6KA6Q9UK32 745 aa10.45□□□□□ -0.74
PTCH1-204ENST00000375290 C1orf232A0A0U1RR37 186 aa10.45□□□□□ -0.74
PTCH1-204ENST00000375290 MYO1GB0I1T2 1018 aa10.45□□□□□ -0.74
PTCH1-204ENST00000375290 HLA-DRAP01903 254 aa10.45□□□□□ -0.74
PTCH1-204ENST00000375290 UMPSP11172 480 aa10.45□□□□□ -0.74
PTCH1-204ENST00000375290 GPAT2Q6NUI2 795 aa10.45□□□□□ -0.74
PTCH1-204ENST00000375290 PACS1Q6VY07 963 aa10.45□□□□□ -0.74
PTCH1-204ENST00000375290 ABRAQ8N0Z2 381 aa10.45□□□□□ -0.74
PTCH1-204ENST00000375290 FAXDC2Q96IV6 333 aa10.45□□□□□ -0.74
PTCH1-204ENST00000375290 CRAMP1Q96RY5 1269 aa10.45□□□□□ -0.74
PTCH1-204ENST00000375290 GH2P01242 217 aa10.45□□□□□ -0.74
PTCH1-204ENST00000375290 MAPK9P45984 424 aa10.45□□□□□ -0.74
PTCH1-204ENST00000375290 SUSD4Q5VX71 490 aa10.45□□□□□ -0.74
PTCH1-204ENST00000375290 CDC73Q6P1J9 531 aa10.45□□□□□ -0.74
PTCH1-204ENST00000375290 BSNDQ8WZ55 320 aa10.45□□□□□ -0.74
PTCH1-204ENST00000375290 ZNF341Q9BYN7 854 aa10.45□□□□□ -0.74
PTCH1-204ENST00000375290 LTKP29376 864 aa10.45□□□□□ -0.74
PTCH1-204ENST00000375290 STK40Q8N2I9 435 aa10.45□□□□□ -0.74
PTCH1-204ENST00000375290 DNAJC16Q9Y2G8 782 aa10.45□□□□□ -0.74
PTCH1-204ENST00000375290 LOC100653049A0A140TA62 436 aa10.45□□□□□ -0.74
PTCH1-204ENST00000375290 NEMP1O14524 444 aa10.45□□□□□ -0.74
PTCH1-204ENST00000375290 BNIP1Q12981 228 aa10.45□□□□□ -0.74
PTCH1-204ENST00000375290 GRB10Q13322 594 aa10.45□□□□□ -0.74
PTCH1-204ENST00000375290 NFYCQ13952 458 aa10.45□□□□□ -0.74
PTCH1-204ENST00000375290 HABP4Q5JVS0 413 aaKnown RBP10.45□□□□□ -0.74
PTCH1-204ENST00000375290 MYO1HQ8N1T3 1032 aa10.45□□□□□ -0.74
PTCH1-204ENST00000375290 SLC39A10Q9ULF5 831 aa10.45□□□□□ -0.74
PTCH1-204ENST00000375290 RGSL1A5PLK6 1076 aa10.45□□□□□ -0.74
PTCH1-204ENST00000375290 EMC2Q15006 297 aa10.45□□□□□ -0.74
PTCH1-204ENST00000375290 KIAA1841Q6NSI8 718 aa10.45□□□□□ -0.74
PTCH1-204ENST00000375290 MTMR8Q96EF0 704 aa10.45□□□□□ -0.74
PTCH1-204ENST00000375290 PKP3Q9Y446 797 aa10.45□□□□□ -0.74
PTCH1-204ENST00000375290 GNA13Q14344 377 aa10.45□□□□□ -0.74
PTCH1-204ENST00000375290 CDH24Q86UP0 819 aa10.45□□□□□ -0.74
PTCH1-204ENST00000375290 C17orf50Q8WW18 174 aa10.45□□□□□ -0.74
PTCH1-204ENST00000375290 NDNQ99608 321 aa10.45□□□□□ -0.74
PTCH1-204ENST00000375290 MMTAG2Q9BU76 263 aaKnown RBP10.45□□□□□ -0.74
PTCH1-204ENST00000375290 MLPHQ9BV36 600 aaPredicted RBP10.45□□□□□ -0.74
PTCH1-204ENST00000375290 THUMPD3Q9BV44 507 aaKnown RBP10.45□□□□□ -0.74
PTCH1-204ENST00000375290 VANGL2Q9ULK5 521 aa10.45□□□□□ -0.74
PTCH1-204ENST00000375290 ERCC6L2Q5T890 1561 aa10.45□□□□□ -0.74
PTCH1-204ENST00000375290 ABL1P00519 1130 aa10.45□□□□□ -0.74
PTCH1-204ENST00000375290 ANPEPP15144 967 aa10.45□□□□□ -0.74
PTCH1-204ENST00000375290 PPP2R1BP30154 601 aa10.45□□□□□ -0.74
PTCH1-204ENST00000375290 INTS11Q5TA45 600 aaKnown RBP10.45□□□□□ -0.74
PTCH1-204ENST00000375290 LRFN2Q9ULH4 789 aa10.45□□□□□ -0.74
PTCH1-204ENST00000375290 TCP10L2B9ZVM9 353 aa10.44□□□□□ -0.74
PTCH1-204ENST00000375290 EXOSC4Q9NPD3 245 aaKnown RBP10.44□□□□□ -0.74
PTCH1-204ENST00000375290 TRMT6Q9UJA5 497 aaKnown RBP10.44□□□□□ -0.74
PTCH1-204ENST00000375290 PSMD13Q9UNM6 376 aa10.44□□□□□ -0.74
PTCH1-204ENST00000375290 GJA8P48165 433 aa10.44□□□□□ -0.74
PTCH1-204ENST00000375290 PRIM2P49643 509 aa10.44□□□□□ -0.74
PTCH1-204ENST00000375290 C4orf19Q8IY42 314 aa10.44□□□□□ -0.74
PTCH1-204ENST00000375290 MCOLN2Q8IZK6 566 aa10.44□□□□□ -0.74
PTCH1-204ENST00000375290 BLOC1S5Q8TDH9 187 aa10.44□□□□□ -0.74
PTCH1-204ENST00000375290 COX4I2Q96KJ9 171 aa10.44□□□□□ -0.74
PTCH1-204ENST00000375290 CGRRF1Q99675 332 aa10.44□□□□□ -0.74
PTCH1-204ENST00000375290 UBXN6Q9BZV1 441 aa10.44□□□□□ -0.74
PTCH1-204ENST00000375290 CD274Q9NZQ7 290 aa10.44□□□□□ -0.74
PTCH1-204ENST00000375290 CAPN1P07384 714 aa10.44□□□□□ -0.74
PTCH1-204ENST00000375290 DUPD1Q68J44 220 aa10.44□□□□□ -0.74
PTCH1-204ENST00000375290 FBXW8Q8N3Y1 598 aa10.44□□□□□ -0.74
PTCH1-204ENST00000375290 TBC1D12O60347 775 aa10.44□□□□□ -0.74
PTCH1-204ENST00000375290 TOB1P50616 345 aaPredicted RBP10.44□□□□□ -0.74
PTCH1-204ENST00000375290 CCR3P51677 355 aa10.44□□□□□ -0.74
PTCH1-204ENST00000375290 HADHBP55084 474 aaKnown RBP10.44□□□□□ -0.74
PTCH1-204ENST00000375290 TMEM119Q4V9L6 283 aa10.44□□□□□ -0.74
PTCH1-204ENST00000375290 ZNF34Q8IZ26 560 aa10.44□□□□□ -0.74
PTCH1-204ENST00000375290 VAV3Q9UKW4 847 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms