RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 ARHGEF4Q9NR80 690 aa18.66■□□□□ 0.58
HLA-DQB1-201ENST00000374943 EURLQ9NYK6 297 aa18.66■□□□□ 0.58
HLA-DQB1-201ENST00000374943 ZMYND8Q9ULU4 1186 aaPredicted RBP18.66■□□□□ 0.58
HLA-DQB1-201ENST00000374943 CDH16O75309 829 aa18.65■□□□□ 0.58
HLA-DQB1-201ENST00000374943 NCAM1P13591 858 aa18.65■□□□□ 0.58
HLA-DQB1-201ENST00000374943 TSHRP16473 764 aa18.65■□□□□ 0.58
HLA-DQB1-201ENST00000374943 AMPD1P23109 780 aa18.65■□□□□ 0.58
HLA-DQB1-201ENST00000374943 ADRA1BP35368 520 aa18.65■□□□□ 0.58
HLA-DQB1-201ENST00000374943 RGS19P49795 217 aa18.65■□□□□ 0.58
HLA-DQB1-201ENST00000374943 BASP1P80723 227 aaKnown RBP18.65■□□□□ 0.58
HLA-DQB1-201ENST00000374943 RNASELQ05823 741 aaKnown RBP18.65■□□□□ 0.58
HLA-DQB1-201ENST00000374943 SEMA3BQ13214 749 aa18.65■□□□□ 0.58
HLA-DQB1-201ENST00000374943 NME3Q13232 169 aa18.65■□□□□ 0.58
HLA-DQB1-201ENST00000374943 FASTKD3Q14CZ7 662 aaKnown RBP18.65■□□□□ 0.58
HLA-DQB1-201ENST00000374943 PPP1R21Q6ZMI0 780 aa18.65■□□□□ 0.58
HLA-DQB1-201ENST00000374943 TAOK1Q7L7X3 1001 aa18.65■□□□□ 0.58
HLA-DQB1-201ENST00000374943 ZBED8Q8IZ13 594 aa18.65■□□□□ 0.58
HLA-DQB1-201ENST00000374943 CENPTQ96BT3 561 aa18.65■□□□□ 0.58
HLA-DQB1-201ENST00000374943 UNC93B1Q9H1C4 597 aa18.65■□□□□ 0.58
HLA-DQB1-201ENST00000374943 PAK6Q9NQU5 681 aaPredicted RBP18.65■□□□□ 0.58
HLA-DQB1-201ENST00000374943 DTLQ9NZJ0 730 aa18.65■□□□□ 0.58
HLA-DQB1-201ENST00000374943 XPO7Q9UIA9 1087 aaKnown RBP18.65■□□□□ 0.58
HLA-DQB1-201ENST00000374943 FBXW11Q9UKB1 542 aa18.65■□□□□ 0.58
HLA-DQB1-201ENST00000374943 TRIM17Q9Y577 477 aa18.65■□□□□ 0.58
HLA-DQB1-201ENST00000374943 TCRBV7S3A2A0A539 114 aa18.64■□□□□ 0.57
HLA-DQB1-201ENST00000374943 E7EVH7 732 aa18.64■□□□□ 0.57
HLA-DQB1-201ENST00000374943 SYN3O14994 580 aa18.64■□□□□ 0.57
HLA-DQB1-201ENST00000374943 TRAPPC3O43617 180 aa18.64■□□□□ 0.57
HLA-DQB1-201ENST00000374943 GCATO75600 419 aa18.64■□□□□ 0.57
HLA-DQB1-201ENST00000374943 DGKIO75912 1065 aa18.64■□□□□ 0.57
HLA-DQB1-201ENST00000374943 ZNF135P52742 658 aaPredicted RBP18.64■□□□□ 0.57
HLA-DQB1-201ENST00000374943 DPYSQ14117 519 aa18.64■□□□□ 0.57
HLA-DQB1-201ENST00000374943 SKIDA1Q1XH10 827 aa18.64■□□□□ 0.57
HLA-DQB1-201ENST00000374943 TTC19Q6DKK2 380 aaPredicted RBP18.64■□□□□ 0.57
HLA-DQB1-201ENST00000374943 TDRPQ86YL5 185 aa18.64■□□□□ 0.57
HLA-DQB1-201ENST00000374943 SPATA2LQ8IUW3 424 aaPredicted RBP18.64■□□□□ 0.57
HLA-DQB1-201ENST00000374943 SH3TC2Q8TF17 1288 aa18.64■□□□□ 0.57
HLA-DQB1-201ENST00000374943 APBB2Q92870 758 aa18.64■□□□□ 0.57
HLA-DQB1-201ENST00000374943 MCOLN1Q9GZU1 580 aa18.64■□□□□ 0.57
HLA-DQB1-201ENST00000374943 ZCWPW1Q9H0M4 648 aa18.64■□□□□ 0.57
HLA-DQB1-201ENST00000374943 GREB1Q4ZG55 1949 aa18.64■□□□□ 0.57
HLA-DQB1-201ENST00000374943 C5orf60A6NFR6 353 aa18.63■□□□□ 0.57
HLA-DQB1-201ENST00000374943 GOLGA8MH3BSY2 632 aa18.63■□□□□ 0.57
HLA-DQB1-201ENST00000374943 ENPP3O14638 875 aa18.63■□□□□ 0.57
HLA-DQB1-201ENST00000374943 ZNF189O75820 626 aaPredicted RBP18.63■□□□□ 0.57
HLA-DQB1-201ENST00000374943 OR1G1P47890 313 aa18.63■□□□□ 0.57
HLA-DQB1-201ENST00000374943 HCAR3P49019 387 aa18.63■□□□□ 0.57
HLA-DQB1-201ENST00000374943 NRLP54845 237 aa18.63■□□□□ 0.57
HLA-DQB1-201ENST00000374943 GAD2Q05329 585 aa18.63■□□□□ 0.57
HLA-DQB1-201ENST00000374943 PAFAH1B3Q15102 231 aaKnown RBP18.63■□□□□ 0.57
HLA-DQB1-201ENST00000374943 RASA2Q15283 850 aa18.63■□□□□ 0.57
HLA-DQB1-201ENST00000374943 FNBP1LQ5T0N5 605 aa18.63■□□□□ 0.57
HLA-DQB1-201ENST00000374943 KCNT2Q6UVM3 1135 aa18.63■□□□□ 0.57
HLA-DQB1-201ENST00000374943 B4GALNT4Q76KP1 1039 aa18.63■□□□□ 0.57
HLA-DQB1-201ENST00000374943 PDIK1LQ8N165 341 aa18.63■□□□□ 0.57
HLA-DQB1-201ENST00000374943 FAM193BQ96PV7 902 aaPredicted RBP18.63■□□□□ 0.57
HLA-DQB1-201ENST00000374943 KLC2Q9H0B6 622 aa18.63■□□□□ 0.57
HLA-DQB1-201ENST00000374943 ETNK2Q9NVF9 386 aa18.63■□□□□ 0.57
HLA-DQB1-201ENST00000374943 FETUBQ9UGM5 382 aa18.63■□□□□ 0.57
HLA-DQB1-201ENST00000374943 CLUHO75153 1309 aa18.63■□□□□ 0.57
HLA-DQB1-201ENST00000374943 SYNJ2BP-COX16A0A087WUM0 186 aa18.63■□□□□ 0.57
HLA-DQB1-201ENST00000374943 CXCR3P49682 368 aa18.63■□□□□ 0.57
HLA-DQB1-201ENST00000374943 ARL13BQ3SXY8 428 aa18.63■□□□□ 0.57
HLA-DQB1-201ENST00000374943 MSS51Q4VC12 460 aa18.63■□□□□ 0.57
HLA-DQB1-201ENST00000374943 BSPRYQ5W0U4 402 aa18.63■□□□□ 0.57
HLA-DQB1-201ENST00000374943 EXOC3L1Q86VI1 746 aa18.63■□□□□ 0.57
HLA-DQB1-201ENST00000374943 CCDC13Q8IYE1 715 aa18.63■□□□□ 0.57
HLA-DQB1-201ENST00000374943 DCP1BQ8IZD4 617 aaKnown RBP18.63■□□□□ 0.57
HLA-DQB1-201ENST00000374943 ATP11CQ8NB49 1132 aa18.63■□□□□ 0.57
HLA-DQB1-201ENST00000374943 DBF4BQ8NFT6 615 aa18.63■□□□□ 0.57
HLA-DQB1-201ENST00000374943 SEPT8Q92599 483 aa18.63■□□□□ 0.57
HLA-DQB1-201ENST00000374943 FUBP3Q96I24 572 aaKnown RBP eCLIP18.63■□□□□ 0.57
HLA-DQB1-201ENST00000374943 COLEC11Q9BWP8 271 aa18.63■□□□□ 0.57
HLA-DQB1-201ENST00000374943 EPN3Q9H201 632 aa18.63■□□□□ 0.57
HLA-DQB1-201ENST00000374943 RAB6BQ9NRW1 208 aa18.63■□□□□ 0.57
HLA-DQB1-201ENST00000374943 DDIT4Q9NX09 232 aa18.63■□□□□ 0.57
HLA-DQB1-201ENST00000374943 COX16Q9P0S2 106 aa18.63■□□□□ 0.57
HLA-DQB1-201ENST00000374943 DNAJB4Q9UDY4 337 aa18.63■□□□□ 0.57
HLA-DQB1-201ENST00000374943 RAD54BQ9Y620 910 aa18.63■□□□□ 0.57
HLA-DQB1-201ENST00000374943 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.63■□□□□ 0.57
HLA-DQB1-201ENST00000374943 MYO18AQ92614 2054 aaKnown RBP18.62■□□□□ 0.57
HLA-DQB1-201ENST00000374943 EEF2KO00418 725 aaKnown RBP18.62■□□□□ 0.57
HLA-DQB1-201ENST00000374943 TNFRSF10BO14763 440 aa18.62■□□□□ 0.57
HLA-DQB1-201ENST00000374943 DCLK1O15075 740 aa18.62■□□□□ 0.57
HLA-DQB1-201ENST00000374943 MFSD11O43934 449 aa18.62■□□□□ 0.57
HLA-DQB1-201ENST00000374943 IGLV3-25P01717 112 aa18.62■□□□□ 0.57
HLA-DQB1-201ENST00000374943 RFX8Q6ZV50 586 aa18.62■□□□□ 0.57
HLA-DQB1-201ENST00000374943 CTU1Q7Z7A3 348 aaKnown RBP18.62■□□□□ 0.57
HLA-DQB1-201ENST00000374943 PYROXD1Q8WU10 500 aa18.62■□□□□ 0.57
HLA-DQB1-201ENST00000374943 TFB1MQ8WVM0 346 aaKnown RBP18.62■□□□□ 0.57
HLA-DQB1-201ENST00000374943 WDR83Q9BRX9 315 aaKnown RBP18.62■□□□□ 0.57
HLA-DQB1-201ENST00000374943 TMPRSS4Q9NRS4 437 aa18.62■□□□□ 0.57
HLA-DQB1-201ENST00000374943 OGDHLQ9ULD0 1010 aa18.62■□□□□ 0.57
HLA-DQB1-201ENST00000374943 PCDHB7Q9Y5E2 793 aa18.62■□□□□ 0.57
HLA-DQB1-201ENST00000374943 EXOC1LA0A1B0GW35 172 aa18.61■□□□□ 0.57
HLA-DQB1-201ENST00000374943 MAP3K6O95382 1288 aa18.61■□□□□ 0.57
HLA-DQB1-201ENST00000374943 PHBP35232 272 aa18.61■□□□□ 0.57
HLA-DQB1-201ENST00000374943 GPX6P59796 221 aa18.61■□□□□ 0.57
HLA-DQB1-201ENST00000374943 EIF4EBP2Q13542 120 aaPredicted RBP18.61■□□□□ 0.57
HLA-DQB1-201ENST00000374943 PRKD1Q15139 912 aaPredicted RBP18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms