RNA–Protein interactions for RNA: ENST00000374732.7

USP48-203, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 3,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-203ENST00000374732 RASGRF2O14827 1237 aa8.19□□□□□ -1.1
USP48-203ENST00000374732 BACH1O14867 736 aa8.19□□□□□ -1.1
USP48-203ENST00000374732 ATXN7O15265 892 aaPredicted RBP8.19□□□□□ -1.1
USP48-203ENST00000374732 SEMA3DO95025 777 aa8.19□□□□□ -1.1
USP48-203ENST00000374732 GNA14O95837 355 aa8.19□□□□□ -1.1
USP48-203ENST00000374732 KRT16P08779 473 aa8.19□□□□□ -1.1
USP48-203ENST00000374732 ODC1P11926 461 aa8.19□□□□□ -1.1
USP48-203ENST00000374732 ITGA2P17301 1181 aa8.19□□□□□ -1.1
USP48-203ENST00000374732 PPM1AP35813 382 aa8.19□□□□□ -1.1
USP48-203ENST00000374732 GARSP41250 739 aaKnown RBP8.19□□□□□ -1.1
USP48-203ENST00000374732 CCR10P46092 362 aa8.19□□□□□ -1.1
USP48-203ENST00000374732 PPP2R5EQ16537 467 aa8.19□□□□□ -1.1
USP48-203ENST00000374732 ODF2Q5BJF6 829 aa8.19□□□□□ -1.1
USP48-203ENST00000374732 MEI1Q5TIA1 1274 aa8.19□□□□□ -1.1
USP48-203ENST00000374732 USPL1Q5W0Q7 1092 aa8.19□□□□□ -1.1
USP48-203ENST00000374732 CASC4Q6P4E1 433 aa8.19□□□□□ -1.1
USP48-203ENST00000374732 NSMFQ6X4W1 530 aa8.19□□□□□ -1.1
USP48-203ENST00000374732 ATAD1Q8NBU5 361 aa8.19□□□□□ -1.1
USP48-203ENST00000374732 PDZD8Q8NEN9 1154 aa8.19□□□□□ -1.1
USP48-203ENST00000374732 SPATA4Q8NEY3 305 aa8.19□□□□□ -1.1
USP48-203ENST00000374732 ATP8B4Q8TF62 1192 aa8.19□□□□□ -1.1
USP48-203ENST00000374732 MSANTD3Q96H12 275 aa8.19□□□□□ -1.1
USP48-203ENST00000374732 DCLK3Q9C098 648 aa8.19□□□□□ -1.1
USP48-203ENST00000374732 EVA1BQ9NVM1 165 aa8.19□□□□□ -1.1
USP48-203ENST00000374732 NINJ2Q9NZG7 142 aa8.19□□□□□ -1.1
USP48-203ENST00000374732 TXNDC16Q9P2K2 825 aa8.19□□□□□ -1.1
USP48-203ENST00000374732 HSFX1Q9UBD0 423 aa8.19□□□□□ -1.1
USP48-203ENST00000374732 RBMX2Q9Y388 322 aaKnown RBP8.19□□□□□ -1.1
USP48-203ENST00000374732 SH3TC1Q8TE82 1336 aa8.19□□□□□ -1.1
USP48-203ENST00000374732 DBX1A6NMT0 343 aa8.19□□□□□ -1.1
USP48-203ENST00000374732 LDLRAD4O15165 306 aa8.19□□□□□ -1.1
USP48-203ENST00000374732 TOMM70O94826 608 aa8.19□□□□□ -1.1
USP48-203ENST00000374732 CHRNA1P02708 482 aa8.19□□□□□ -1.1
USP48-203ENST00000374732 GFAPP14136 432 aa8.19□□□□□ -1.1
USP48-203ENST00000374732 TCEA1P23193 301 aaKnown RBP8.19□□□□□ -1.1
USP48-203ENST00000374732 PON1P27169 355 aa8.19□□□□□ -1.1
USP48-203ENST00000374732 HOXD13P35453 343 aa8.19□□□□□ -1.1
USP48-203ENST00000374732 WNT5AP41221 380 aa8.19□□□□□ -1.1
USP48-203ENST00000374732 NR1H2P55055 460 aa8.19□□□□□ -1.1
USP48-203ENST00000374732 CABP4P57796 275 aa8.19□□□□□ -1.1
USP48-203ENST00000374732 PHC1P78364 1004 aa8.19□□□□□ -1.1
USP48-203ENST00000374732 IFFO1Q0D2I5 559 aa8.19□□□□□ -1.1
USP48-203ENST00000374732 HIC1Q14526 733 aa8.19□□□□□ -1.1
USP48-203ENST00000374732 ALX1Q15699 326 aa8.19□□□□□ -1.1
USP48-203ENST00000374732 DPYSL2Q16555 572 aa8.19□□□□□ -1.1
USP48-203ENST00000374732 TPD52L1Q16890 204 aaPredicted RBP8.19□□□□□ -1.1
USP48-203ENST00000374732 CCDC58Q4VC31 144 aa8.19□□□□□ -1.1
USP48-203ENST00000374732 IFIT1BQ5T764 474 aaKnown RBP8.19□□□□□ -1.1
USP48-203ENST00000374732 RNF220Q5VTB9 566 aa8.19□□□□□ -1.1
USP48-203ENST00000374732 IQSEC1Q6DN90 963 aa8.19□□□□□ -1.1
USP48-203ENST00000374732 SNRNP48Q6IEG0 339 aaKnown RBP8.19□□□□□ -1.1
USP48-203ENST00000374732 FDX2Q6P4F2 183 aa8.19□□□□□ -1.1
USP48-203ENST00000374732 ZNF783Q6ZMS7 281 aa8.19□□□□□ -1.1
USP48-203ENST00000374732 USP43Q70EL4 1123 aa8.19□□□□□ -1.1
USP48-203ENST00000374732 C16orf59Q7L2K0 433 aa8.19□□□□□ -1.1
USP48-203ENST00000374732 COPS6Q7L5N1 327 aa8.19□□□□□ -1.1
USP48-203ENST00000374732 TRPM8Q7Z2W7 1104 aa8.19□□□□□ -1.1
USP48-203ENST00000374732 SCUBE3Q8IX30 993 aa8.19□□□□□ -1.1
USP48-203ENST00000374732 CYP4X1Q8N118 509 aa8.19□□□□□ -1.1
USP48-203ENST00000374732 SLC43A2Q8N370 569 aa8.19□□□□□ -1.1
USP48-203ENST00000374732 XAGE3Q8WTP9 111 aa8.19□□□□□ -1.1
USP48-203ENST00000374732 POMGNT1Q8WZA1 660 aa8.19□□□□□ -1.1
USP48-203ENST00000374732 HDAC10Q969S8 669 aa8.19□□□□□ -1.1
USP48-203ENST00000374732 KIAA1191Q96A73 305 aa8.19□□□□□ -1.1
USP48-203ENST00000374732 SLC29A1Q99808 456 aa8.19□□□□□ -1.1
USP48-203ENST00000374732 TTLL2Q9BWV7 592 aa8.19□□□□□ -1.1
USP48-203ENST00000374732 RIMS4Q9H426 269 aaPredicted RBP8.19□□□□□ -1.1
USP48-203ENST00000374732 SUCOQ9UBS9 1254 aaKnown RBP8.19□□□□□ -1.1
USP48-203ENST00000374732 LRRC42Q9Y546 428 aa8.19□□□□□ -1.1
USP48-203ENST00000374732 TAF1LQ8IZX4 1826 aa8.19□□□□□ -1.1
USP48-203ENST00000374732 WDR91A4D1P6 747 aa8.19□□□□□ -1.1
USP48-203ENST00000374732 H0YIN7 160 aa8.19□□□□□ -1.1
USP48-203ENST00000374732 TSPAN3O60637 253 aa8.19□□□□□ -1.1
USP48-203ENST00000374732 ASNSP08243 561 aa8.19□□□□□ -1.1
USP48-203ENST00000374732 TIMP2P16035 220 aa8.19□□□□□ -1.1
USP48-203ENST00000374732 ITGB8P26012 769 aa8.19□□□□□ -1.1
USP48-203ENST00000374732 PDHA2P29803 388 aa8.19□□□□□ -1.1
USP48-203ENST00000374732 NUP62P37198 522 aaPredicted RBP8.19□□□□□ -1.1
USP48-203ENST00000374732 PPP5CP53041 499 aa8.19□□□□□ -1.1
USP48-203ENST00000374732 AIF1P55008 147 aa8.19□□□□□ -1.1
USP48-203ENST00000374732 P2RX3P56373 397 aa8.19□□□□□ -1.1
USP48-203ENST00000374732 SSRP1Q08945 709 aaKnown RBP8.19□□□□□ -1.1
USP48-203ENST00000374732 SCRN3Q0VDG4 424 aa8.19□□□□□ -1.1
USP48-203ENST00000374732 LRMPQ12912 555 aa8.19□□□□□ -1.1
USP48-203ENST00000374732 SLC39A6Q13433 755 aa8.19□□□□□ -1.1
USP48-203ENST00000374732 KANK2Q63ZY3 851 aa8.19□□□□□ -1.1
USP48-203ENST00000374732 GLRX5Q86SX6 157 aa8.19□□□□□ -1.1
USP48-203ENST00000374732 KIAA0319LQ8IZA0 1049 aa8.19□□□□□ -1.1
USP48-203ENST00000374732 LINC00518Q8N0U6 118 aa8.19□□□□□ -1.1
USP48-203ENST00000374732 ARL14Q8N4G2 192 aa8.19□□□□□ -1.1
USP48-203ENST00000374732 KCTD6Q8NC69 237 aa8.19□□□□□ -1.1
USP48-203ENST00000374732 DPF2Q92785 391 aa8.19□□□□□ -1.1
USP48-203ENST00000374732 DDX17Q92841 729 aaKnown RBP8.19□□□□□ -1.1
USP48-203ENST00000374732 LENG1Q96BZ8 264 aaPredicted RBP8.19□□□□□ -1.1
USP48-203ENST00000374732 AHCYL2Q96HN2 611 aaKnown RBP8.19□□□□□ -1.1
USP48-203ENST00000374732 SEC22CQ9BRL7 303 aa8.19□□□□□ -1.1
USP48-203ENST00000374732 TM6SF1Q9BZW5 370 aa8.19□□□□□ -1.1
USP48-203ENST00000374732 ISCUQ9H1K1 167 aa8.19□□□□□ -1.1
USP48-203ENST00000374732 MAN1C1Q9NR34 630 aa8.19□□□□□ -1.1
USP48-203ENST00000374732 PKD2L2Q9NZM6 624 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms