RNA–Protein interactions for RNA: ENST00000374606.9

PFDN6-201, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN6, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-201ENST00000374606 TMC8Q8IU68 726 aa18.24■□□□□ 0.51
PFDN6-201ENST00000374606 FLCNQ8NFG4 579 aa18.24■□□□□ 0.51
PFDN6-201ENST00000374606 DQX1Q8TE96 717 aaKnown RBP18.24■□□□□ 0.51
PFDN6-201ENST00000374606 CDK5RAP1Q96SZ6 601 aaKnown RBP18.24■□□□□ 0.51
PFDN6-201ENST00000374606 NAPGQ99747 312 aaPredicted RBP18.24■□□□□ 0.51
PFDN6-201ENST00000374606 CORO1BQ9BR76 489 aa18.24■□□□□ 0.51
PFDN6-201ENST00000374606 PRKD2Q9BZL6 878 aa18.24■□□□□ 0.51
PFDN6-201ENST00000374606 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.24■□□□□ 0.51
PFDN6-201ENST00000374606 VPS13AQ96RL7 3174 aa18.24■□□□□ 0.51
PFDN6-201ENST00000374606 CACNA1AO00555 2505 aa18.24■□□□□ 0.51
PFDN6-201ENST00000374606 CTAGE9A4FU28 777 aa18.23■□□□□ 0.51
PFDN6-201ENST00000374606 ZNF840PA6NDX5 716 aa18.23■□□□□ 0.51
PFDN6-201ENST00000374606 MIF4GDA9UHW6 222 aaKnown RBP18.23■□□□□ 0.51
PFDN6-201ENST00000374606 M0QYT0 321 aa18.23■□□□□ 0.51
PFDN6-201ENST00000374606 LRCH4O75427 683 aa18.23■□□□□ 0.51
PFDN6-201ENST00000374606 TADA3O75528 432 aa18.23■□□□□ 0.51
PFDN6-201ENST00000374606 FGF19O95750 216 aa18.23■□□□□ 0.51
PFDN6-201ENST00000374606 MYL4P12829 197 aa18.23■□□□□ 0.51
PFDN6-201ENST00000374606 PTPN2P17706 415 aa18.23■□□□□ 0.51
PFDN6-201ENST00000374606 TFE3P19532 575 aaPredicted RBP18.23■□□□□ 0.51
PFDN6-201ENST00000374606 GABRR2P28476 465 aa18.23■□□□□ 0.51
PFDN6-201ENST00000374606 CDC25CP30307 473 aa18.23■□□□□ 0.51
PFDN6-201ENST00000374606 RDXP35241 583 aaKnown RBP18.23■□□□□ 0.51
PFDN6-201ENST00000374606 PCK1P35558 622 aa18.23■□□□□ 0.51
PFDN6-201ENST00000374606 PITX1P78337 314 aaPredicted RBP18.23■□□□□ 0.51
PFDN6-201ENST00000374606 DEUP1Q05D60 604 aa18.23■□□□□ 0.51
PFDN6-201ENST00000374606 PABPC1LQ4VXU2 614 aaKnown RBP18.23■□□□□ 0.51
PFDN6-201ENST00000374606 SH3PXD2AQ5TCZ1 1133 aa18.23■□□□□ 0.51
PFDN6-201ENST00000374606 MEI1Q5TIA1 1274 aa18.23■□□□□ 0.51
PFDN6-201ENST00000374606 OTUD1Q5VV17 481 aaPredicted RBP18.23■□□□□ 0.51
PFDN6-201ENST00000374606 SNX30Q5VWJ9 437 aa18.23■□□□□ 0.51
PFDN6-201ENST00000374606 DAB2IPQ5VWQ8 1189 aa18.23■□□□□ 0.51
PFDN6-201ENST00000374606 TAC4Q86UU9 113 aa18.23■□□□□ 0.51
PFDN6-201ENST00000374606 HS6ST3Q8IZP7 471 aa18.23■□□□□ 0.51
PFDN6-201ENST00000374606 C12orf76Q8N812 135 aaPredicted RBP18.23■□□□□ 0.51
PFDN6-201ENST00000374606 LEMD2Q8NC56 503 aa18.23■□□□□ 0.51
PFDN6-201ENST00000374606 UBE2Q2Q8WVN8 375 aa18.23■□□□□ 0.51
PFDN6-201ENST00000374606 ZNF592Q92610 1267 aa18.23■□□□□ 0.51
PFDN6-201ENST00000374606 NT5C3BQ969T7 300 aa18.23■□□□□ 0.51
PFDN6-201ENST00000374606 IL21Q9HBE4 155 aa18.23■□□□□ 0.51
PFDN6-201ENST00000374606 DDIT4Q9NX09 232 aa18.23■□□□□ 0.51
PFDN6-201ENST00000374606 PACSIN2Q9UNF0 486 aaPredicted RBP18.23■□□□□ 0.51
PFDN6-201ENST00000374606 DENND4AQ7Z401 1863 aa18.22■□□□□ 0.51
PFDN6-201ENST00000374606 SYNJ2BP-COX16A0A087WUM0 186 aa18.22■□□□□ 0.51
PFDN6-201ENST00000374606 CCDC195A0A1B0GUA6 201 aa18.22■□□□□ 0.51
PFDN6-201ENST00000374606 ENC1O14682 589 aa18.22■□□□□ 0.51
PFDN6-201ENST00000374606 TLR5O60602 858 aa18.22■□□□□ 0.51
PFDN6-201ENST00000374606 TRUB2O95900 331 aaKnown RBP18.22■□□□□ 0.51
PFDN6-201ENST00000374606 ATP1A1P05023 1023 aaKnown RBP18.22■□□□□ 0.51
PFDN6-201ENST00000374606 GBP1P32455 592 aa18.22■□□□□ 0.51
PFDN6-201ENST00000374606 GJC1P36383 396 aa18.22■□□□□ 0.51
PFDN6-201ENST00000374606 TUBP50607 506 aa18.22■□□□□ 0.51
PFDN6-201ENST00000374606 HDAC4P56524 1084 aa18.22■□□□□ 0.51
PFDN6-201ENST00000374606 NME3Q13232 169 aa18.22■□□□□ 0.51
PFDN6-201ENST00000374606 RPS6KA1Q15418 735 aa18.22■□□□□ 0.51
PFDN6-201ENST00000374606 HADHQ16836 314 aaKnown RBP18.22■□□□□ 0.51
PFDN6-201ENST00000374606 C10orf120Q5SQS8 335 aa18.22■□□□□ 0.51
PFDN6-201ENST00000374606 HECTD3Q5T447 861 aa18.22■□□□□ 0.51
PFDN6-201ENST00000374606 SND1Q7KZF4 910 aaKnown RBP eCLIP18.22■□□□□ 0.51
PFDN6-201ENST00000374606 RHOT1Q8IXI2 618 aa18.22■□□□□ 0.51
PFDN6-201ENST00000374606 CCDC105Q8IYK2 499 aa18.22■□□□□ 0.51
PFDN6-201ENST00000374606 ADAM32Q8TC27 787 aa18.22■□□□□ 0.51
PFDN6-201ENST00000374606 MRPS31Q92665 395 aaKnown RBP18.22■□□□□ 0.51
PFDN6-201ENST00000374606 CENPIQ92674 756 aaPredicted RBP18.22■□□□□ 0.51
PFDN6-201ENST00000374606 PGAP3Q96FM1 320 aaPredicted RBP18.22■□□□□ 0.51
PFDN6-201ENST00000374606 SERPINB11Q96P15 392 aa18.22■□□□□ 0.51
PFDN6-201ENST00000374606 LRRC3Q9BY71 257 aa18.22■□□□□ 0.51
PFDN6-201ENST00000374606 NACA2Q9H009 215 aa18.22■□□□□ 0.51
PFDN6-201ENST00000374606 CCSER2Q9H7U1 834 aa18.22■□□□□ 0.51
PFDN6-201ENST00000374606 PIDD1Q9HB75 910 aa18.22■□□□□ 0.51
PFDN6-201ENST00000374606 COX16Q9P0S2 106 aa18.22■□□□□ 0.51
PFDN6-201ENST00000374606 RASAL2Q9UJF2 1139 aa18.22■□□□□ 0.51
PFDN6-201ENST00000374606 NUDT5Q9UKK9 219 aa18.22■□□□□ 0.51
PFDN6-201ENST00000374606 DCHS1Q96JQ0 3298 aa18.22■□□□□ 0.51
PFDN6-201ENST00000374606 CCDC66A2RUB6 948 aa18.21■□□□□ 0.51
PFDN6-201ENST00000374606 IRAK2O43187 625 aa18.21■□□□□ 0.51
PFDN6-201ENST00000374606 PSTPIP1O43586 416 aa18.21■□□□□ 0.51
PFDN6-201ENST00000374606 PRPSAP2O60256 369 aa18.21■□□□□ 0.51
PFDN6-201ENST00000374606 F9P00740 461 aa18.21■□□□□ 0.51
PFDN6-201ENST00000374606 F11P03951 625 aa18.21■□□□□ 0.51
PFDN6-201ENST00000374606 AOC1P19801 751 aa18.21■□□□□ 0.51
PFDN6-201ENST00000374606 CTNNA2P26232 953 aa18.21■□□□□ 0.51
PFDN6-201ENST00000374606 MIPP30301 263 aa18.21■□□□□ 0.51
PFDN6-201ENST00000374606 CTNNA1P35221 906 aaKnown RBP18.21■□□□□ 0.51
PFDN6-201ENST00000374606 DNA2P51530 1060 aa18.21■□□□□ 0.51
PFDN6-201ENST00000374606 EPHA5P54756 1037 aa18.21■□□□□ 0.51
PFDN6-201ENST00000374606 TAS2R40P59535 323 aa18.21■□□□□ 0.51
PFDN6-201ENST00000374606 EFEMP1Q12805 493 aa18.21■□□□□ 0.51
PFDN6-201ENST00000374606 DNTTIP2Q5QJE6 756 aaKnown RBP18.21■□□□□ 0.51
PFDN6-201ENST00000374606 SCYL2Q6P3W7 929 aa18.21■□□□□ 0.51
PFDN6-201ENST00000374606 PDZD4Q76G19 769 aaPredicted RBP18.21■□□□□ 0.51
PFDN6-201ENST00000374606 BNIPLQ7Z465 357 aa18.21■□□□□ 0.51
PFDN6-201ENST00000374606 TMEM150AQ86TG1 271 aa18.21■□□□□ 0.51
PFDN6-201ENST00000374606 ZNF276Q8N554 614 aa18.21■□□□□ 0.51
PFDN6-201ENST00000374606 ARFGAP1Q8N6T3 406 aa18.21■□□□□ 0.51
PFDN6-201ENST00000374606 UBL4BQ8N7F7 174 aa18.21■□□□□ 0.51
PFDN6-201ENST00000374606 CMASQ8NFW8 434 aaPredicted RBP18.21■□□□□ 0.51
PFDN6-201ENST00000374606 SMG7Q92540 1137 aaKnown RBP18.21■□□□□ 0.51
PFDN6-201ENST00000374606 CD101Q93033 1021 aa18.21■□□□□ 0.51
PFDN6-201ENST00000374606 ZNF707Q96C28 371 aaPredicted RBP18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms