RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 M0QZ92 97 aa12.53□□□□□ -0.4
HMGCL-202ENST00000374487 CHADO15335 359 aa12.53□□□□□ -0.4
HMGCL-202ENST00000374487 PRPF4O43172 522 aaKnown RBP eCLIP12.53□□□□□ -0.4
HMGCL-202ENST00000374487 KRT4P19013 534 aa12.53□□□□□ -0.4
HMGCL-202ENST00000374487 SCNN1AP37088 669 aa12.53□□□□□ -0.4
HMGCL-202ENST00000374487 ELK3P41970 407 aa12.53□□□□□ -0.4
HMGCL-202ENST00000374487 SCTRP47872 440 aa12.53□□□□□ -0.4
HMGCL-202ENST00000374487 PPIGQ13427 754 aaKnown RBP eCLIP12.53□□□□□ -0.4
HMGCL-202ENST00000374487 SPARCL1Q14515 664 aa12.53□□□□□ -0.4
HMGCL-202ENST00000374487 EFTUD2Q15029 972 aaKnown RBP eCLIP12.53□□□□□ -0.4
HMGCL-202ENST00000374487 EFHC1Q5JVL4 640 aa12.53□□□□□ -0.4
HMGCL-202ENST00000374487 FBXW10Q5XX13 1052 aa12.53□□□□□ -0.4
HMGCL-202ENST00000374487 TRPM8Q7Z2W7 1104 aa12.53□□□□□ -0.4
HMGCL-202ENST00000374487 SPATA21Q7Z572 469 aa12.53□□□□□ -0.4
HMGCL-202ENST00000374487 B3GALNT2Q8NCR0 500 aa12.53□□□□□ -0.4
HMGCL-202ENST00000374487 SMG8Q8ND04 991 aaKnown RBP12.53□□□□□ -0.4
HMGCL-202ENST00000374487 CYTH2Q99418 400 aa12.53□□□□□ -0.4
HMGCL-202ENST00000374487 PAFAH2Q99487 392 aa12.53□□□□□ -0.4
HMGCL-202ENST00000374487 KLC2Q9H0B6 622 aa12.53□□□□□ -0.4
HMGCL-202ENST00000374487 NRDE2Q9H7Z3 1164 aa12.53□□□□□ -0.4
HMGCL-202ENST00000374487 AP4E1Q9UPM8 1137 aa12.53□□□□□ -0.4
HMGCL-202ENST00000374487 A0A1W2PPM1 405 aa12.53□□□□□ -0.4
HMGCL-202ENST00000374487 PIAS1O75925 651 aa12.53□□□□□ -0.4
HMGCL-202ENST00000374487 FGBP02675 491 aa12.53□□□□□ -0.4
HMGCL-202ENST00000374487 GHRP10912 638 aa12.53□□□□□ -0.4
HMGCL-202ENST00000374487 TSHRP16473 764 aa12.53□□□□□ -0.4
HMGCL-202ENST00000374487 ZFXP17010 805 aaPredicted RBP12.53□□□□□ -0.4
HMGCL-202ENST00000374487 L1CAMP32004 1257 aa12.53□□□□□ -0.4
HMGCL-202ENST00000374487 RPA3P35244 121 aaPredicted RBP12.53□□□□□ -0.4
HMGCL-202ENST00000374487 SLC18A1P54219 525 aa12.53□□□□□ -0.4
HMGCL-202ENST00000374487 ATXN1P54253 815 aaKnown RBP12.53□□□□□ -0.4
HMGCL-202ENST00000374487 YWHAGP61981 247 aaKnown RBP eCLIP12.53□□□□□ -0.4
HMGCL-202ENST00000374487 KCNJ11Q14654 390 aa12.53□□□□□ -0.4
HMGCL-202ENST00000374487 SEPT7Q16181 437 aaKnown RBP12.53□□□□□ -0.4
HMGCL-202ENST00000374487 DPYSL2Q16555 572 aa12.53□□□□□ -0.4
HMGCL-202ENST00000374487 ARCQ7LC44 396 aa12.53□□□□□ -0.4
HMGCL-202ENST00000374487 CENPIQ92674 756 aaPredicted RBP12.53□□□□□ -0.4
HMGCL-202ENST00000374487 FAM149B1Q96BN6 582 aa12.53□□□□□ -0.4
HMGCL-202ENST00000374487 PITPNM3Q9BZ71 974 aa12.53□□□□□ -0.4
HMGCL-202ENST00000374487 TRIP11Q15643 1979 aa12.52□□□□□ -0.4
HMGCL-202ENST00000374487 ZNF487B1APH4 448 aa12.52□□□□□ -0.4
HMGCL-202ENST00000374487 CYB561D2O14569 222 aa12.52□□□□□ -0.4
HMGCL-202ENST00000374487 AVILO75366 819 aa12.52□□□□□ -0.4
HMGCL-202ENST00000374487 APRTP07741 180 aa12.52□□□□□ -0.4
HMGCL-202ENST00000374487 PBX2P40425 430 aa12.52□□□□□ -0.4
HMGCL-202ENST00000374487 WDR4P57081 412 aaKnown RBP12.52□□□□□ -0.4
HMGCL-202ENST00000374487 FAM182AQ5T1J6 154 aa12.52□□□□□ -0.4
HMGCL-202ENST00000374487 HHATQ5VTY9 493 aa12.52□□□□□ -0.4
HMGCL-202ENST00000374487 TAF2Q6P1X5 1199 aa12.52□□□□□ -0.4
HMGCL-202ENST00000374487 ADGRD1Q6QNK2 874 aa12.52□□□□□ -0.4
HMGCL-202ENST00000374487 PIGZQ86VD9 579 aa12.52□□□□□ -0.4
HMGCL-202ENST00000374487 CDKL3Q8IVW4 592 aaPredicted RBP12.52□□□□□ -0.4
HMGCL-202ENST00000374487 TOP6BLQ8N6T0 577 aa12.52□□□□□ -0.4
HMGCL-202ENST00000374487 DBF4BQ8NFT6 615 aa12.52□□□□□ -0.4
HMGCL-202ENST00000374487 PLCD4Q9BRC7 762 aa12.52□□□□□ -0.4
HMGCL-202ENST00000374487 WDR83Q9BRX9 315 aaKnown RBP12.52□□□□□ -0.4
HMGCL-202ENST00000374487 FRMD8Q9BZ67 464 aaPredicted RBP12.52□□□□□ -0.4
HMGCL-202ENST00000374487 CDY2AQ9Y6F7 541 aa12.52□□□□□ -0.4
HMGCL-202ENST00000374487 ZBBXA8MT70 800 aa12.52□□□□□ -0.41
HMGCL-202ENST00000374487 XPO1O14980 1071 aaKnown RBP12.52□□□□□ -0.41
HMGCL-202ENST00000374487 ASMTLO95671 621 aa12.52□□□□□ -0.41
HMGCL-202ENST00000374487 MYOGP15173 224 aa12.52□□□□□ -0.41
HMGCL-202ENST00000374487 TAC1P20366 129 aa12.52□□□□□ -0.41
HMGCL-202ENST00000374487 WARSP23381 471 aaKnown RBP12.52□□□□□ -0.41
HMGCL-202ENST00000374487 ACAT1P24752 427 aaKnown RBP12.52□□□□□ -0.41
HMGCL-202ENST00000374487 MATKP42679 507 aa12.52□□□□□ -0.41
HMGCL-202ENST00000374487 NR2C2P49116 596 aa12.52□□□□□ -0.41
HMGCL-202ENST00000374487 RPL34P49207 117 aaKnown RBP12.52□□□□□ -0.41
HMGCL-202ENST00000374487 RABGGTBP53611 331 aa12.52□□□□□ -0.41
HMGCL-202ENST00000374487 MGAT3Q09327 533 aa12.52□□□□□ -0.41
HMGCL-202ENST00000374487 ADIGQ0VDE8 80 aa12.52□□□□□ -0.41
HMGCL-202ENST00000374487 SPRED3Q2MJR0 410 aa12.52□□□□□ -0.41
HMGCL-202ENST00000374487 FAXCQ5TGI0 409 aa12.52□□□□□ -0.41
HMGCL-202ENST00000374487 C4orf22Q6V702 233 aa12.52□□□□□ -0.41
HMGCL-202ENST00000374487 FAM228AQ86W67 206 aa12.52□□□□□ -0.41
HMGCL-202ENST00000374487 IGDCC3Q8IVU1 814 aa12.52□□□□□ -0.41
HMGCL-202ENST00000374487 CCDC110Q8TBZ0 833 aa12.52□□□□□ -0.41
HMGCL-202ENST00000374487 LRRN4Q8WUT4 740 aa12.52□□□□□ -0.41
HMGCL-202ENST00000374487 GRAMD1AQ96CP6 724 aa12.52□□□□□ -0.41
HMGCL-202ENST00000374487 RTP4Q96DX8 246 aa12.52□□□□□ -0.41
HMGCL-202ENST00000374487 ZFP42Q96MM3 310 aa12.52□□□□□ -0.41
HMGCL-202ENST00000374487 MED10Q9BTT4 135 aa12.52□□□□□ -0.41
HMGCL-202ENST00000374487 C11orf84Q9BUA3 381 aaPredicted RBP12.52□□□□□ -0.41
HMGCL-202ENST00000374487 DUSP16Q9BY84 665 aa12.52□□□□□ -0.41
HMGCL-202ENST00000374487 AGO3Q9H9G7 860 aaKnown RBP12.52□□□□□ -0.41
HMGCL-202ENST00000374487 ARL2BPQ9Y2Y0 163 aa12.52□□□□□ -0.41
HMGCL-202ENST00000374487 SPAG6O75602 509 aa12.51□□□□□ -0.41
HMGCL-202ENST00000374487 OAS1P00973 400 aaKnown RBP12.51□□□□□ -0.41
HMGCL-202ENST00000374487 PTPN1P18031 435 aaKnown RBP12.51□□□□□ -0.41
HMGCL-202ENST00000374487 TKTP29401 623 aaKnown RBP12.51□□□□□ -0.41
HMGCL-202ENST00000374487 FOXN2P32314 431 aa12.51□□□□□ -0.41
HMGCL-202ENST00000374487 ARL4AP40617 200 aa12.51□□□□□ -0.41
HMGCL-202ENST00000374487 SULT1E1P49888 294 aa12.51□□□□□ -0.41
HMGCL-202ENST00000374487 GBE1Q04446 702 aa12.51□□□□□ -0.41
HMGCL-202ENST00000374487 SLC20A2Q08357 652 aa12.51□□□□□ -0.41
HMGCL-202ENST00000374487 DCAF6Q58WW2 860 aa12.51□□□□□ -0.41
HMGCL-202ENST00000374487 FAM133BQ5BKY9 247 aaKnown RBP12.51□□□□□ -0.41
HMGCL-202ENST00000374487 WSCD1Q658N2 575 aa12.51□□□□□ -0.41
HMGCL-202ENST00000374487 FAM47EQ6ZV65 393 aa12.51□□□□□ -0.41
HMGCL-202ENST00000374487 Q7L0L9 218 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms