RNA–Protein interactions for RNA: ENST00000374429.6

CXCL12-203, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXCL12, Length 3,532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-203ENST00000374429 RNASEH2BQ5TBB1 312 aaKnown RBP11.18□□□□□ -0.62
CXCL12-203ENST00000374429 IQSEC1Q6DN90 963 aa11.18□□□□□ -0.62
CXCL12-203ENST00000374429 GDF6Q6KF10 455 aaPredicted RBP11.18□□□□□ -0.62
CXCL12-203ENST00000374429 GPRIN1Q7Z2K8 1008 aa11.18□□□□□ -0.62
CXCL12-203ENST00000374429 NDUFAF2Q8N183 169 aa11.18□□□□□ -0.62
CXCL12-203ENST00000374429 ATXN2LQ8WWM7 1075 aaKnown RBP11.18□□□□□ -0.62
CXCL12-203ENST00000374429 TLCD1Q96CP7 247 aa11.18□□□□□ -0.62
CXCL12-203ENST00000374429 RSRC1Q96IZ7 334 aaKnown RBP11.18□□□□□ -0.62
CXCL12-203ENST00000374429 YIPF3Q9GZM5 350 aa11.18□□□□□ -0.62
CXCL12-203ENST00000374429 CCT8L1PA6NM43 557 aa11.18□□□□□ -0.62
CXCL12-203ENST00000374429 COQ9O75208 318 aa11.18□□□□□ -0.62
CXCL12-203ENST00000374429 PMPCBO75439 489 aa11.18□□□□□ -0.62
CXCL12-203ENST00000374429 GABBR2O75899 941 aa11.18□□□□□ -0.62
CXCL12-203ENST00000374429 JCHAINP01591 159 aa11.18□□□□□ -0.62
CXCL12-203ENST00000374429 THP07101 528 aa11.18□□□□□ -0.62
CXCL12-203ENST00000374429 PFKMP08237 780 aa11.18□□□□□ -0.62
CXCL12-203ENST00000374429 PTPN1P18031 435 aaKnown RBP11.18□□□□□ -0.62
CXCL12-203ENST00000374429 MGAT1P26572 445 aa11.18□□□□□ -0.62
CXCL12-203ENST00000374429 STAT4Q14765 748 aa11.18□□□□□ -0.62
CXCL12-203ENST00000374429 SETDB1Q15047 1291 aa11.18□□□□□ -0.62
CXCL12-203ENST00000374429 DDR2Q16832 855 aa11.18□□□□□ -0.62
CXCL12-203ENST00000374429 PCGF5Q86SE9 256 aa11.18□□□□□ -0.62
CXCL12-203ENST00000374429 SERPINB12Q96P63 405 aa11.18□□□□□ -0.62
CXCL12-203ENST00000374429 PRDM12Q9H4Q4 367 aa11.18□□□□□ -0.62
CXCL12-203ENST00000374429 PACSIN3Q9UKS6 424 aa11.18□□□□□ -0.62
CXCL12-203ENST00000374429 NRCAMQ92823 1304 aa11.18□□□□□ -0.62
CXCL12-203ENST00000374429 APOC4-APOC2K7ER74 178 aa11.17□□□□□ -0.62
CXCL12-203ENST00000374429 COPEO14579 308 aa11.17□□□□□ -0.62
CXCL12-203ENST00000374429 BNIP3LO60238 219 aa11.17□□□□□ -0.62
CXCL12-203ENST00000374429 APOC2P02655 101 aa11.17□□□□□ -0.62
CXCL12-203ENST00000374429 PROZP22891 400 aa11.17□□□□□ -0.62
CXCL12-203ENST00000374429 PSMB4P28070 264 aa11.17□□□□□ -0.62
CXCL12-203ENST00000374429 GBP1P32455 592 aa11.17□□□□□ -0.62
CXCL12-203ENST00000374429 GEMIN4P57678 1058 aaKnown RBP11.17□□□□□ -0.62
CXCL12-203ENST00000374429 PRKCZQ05513 592 aa11.17□□□□□ -0.62
CXCL12-203ENST00000374429 TRIM68Q6AZZ1 485 aa11.17□□□□□ -0.62
CXCL12-203ENST00000374429 RSPH3Q86UC2 560 aa11.17□□□□□ -0.62
CXCL12-203ENST00000374429 SLC25A41Q8N5S1 370 aa11.17□□□□□ -0.62
CXCL12-203ENST00000374429 ZC3H15Q8WU90 426 aaKnown RBP11.17□□□□□ -0.62
CXCL12-203ENST00000374429 PCDH9Q9HC56 1237 aa11.17□□□□□ -0.62
CXCL12-203ENST00000374429 FBXO6Q9NRD1 293 aaPredicted RBP11.17□□□□□ -0.62
CXCL12-203ENST00000374429 MPP6Q9NZW5 540 aa11.17□□□□□ -0.62
CXCL12-203ENST00000374429 USP15Q9Y4E8 981 aaPredicted RBP11.17□□□□□ -0.62
CXCL12-203ENST00000374429 TRIP12Q14669 1992 aaPredicted RBP11.17□□□□□ -0.62
CXCL12-203ENST00000374429 A0A0C4DFX4 3053 aa11.17□□□□□ -0.62
CXCL12-203ENST00000374429 ANKRD33BA6NCL7 494 aa11.17□□□□□ -0.62
CXCL12-203ENST00000374429 EEF2KO00418 725 aaKnown RBP11.17□□□□□ -0.62
CXCL12-203ENST00000374429 TRDMT1O14717 391 aaKnown RBP11.17□□□□□ -0.62
CXCL12-203ENST00000374429 PMM2O15305 246 aa11.17□□□□□ -0.62
CXCL12-203ENST00000374429 PAEPP09466 180 aa11.17□□□□□ -0.62
CXCL12-203ENST00000374429 FAM200BP0CF97 657 aa11.17□□□□□ -0.62
CXCL12-203ENST00000374429 YWHAZP63104 245 aaKnown RBP11.17□□□□□ -0.62
CXCL12-203ENST00000374429 KDSRQ06136 332 aa11.17□□□□□ -0.62
CXCL12-203ENST00000374429 OASLQ15646 514 aaKnown RBP11.17□□□□□ -0.62
CXCL12-203ENST00000374429 FAM110CQ1W6H9 321 aa11.17□□□□□ -0.62
CXCL12-203ENST00000374429 PPM1JQ5JR12 505 aa11.17□□□□□ -0.62
CXCL12-203ENST00000374429 LCLAT1Q6UWP7 414 aa11.17□□□□□ -0.62
CXCL12-203ENST00000374429 BBS12Q6ZW61 710 aa11.17□□□□□ -0.62
CXCL12-203ENST00000374429 RAPH1Q70E73 1250 aa11.17□□□□□ -0.62
CXCL12-203ENST00000374429 ANKRD23Q86SG2 305 aa11.17□□□□□ -0.62
CXCL12-203ENST00000374429 EFCAB3Q8N7B9 438 aa11.17□□□□□ -0.62
CXCL12-203ENST00000374429 COLGALT1Q8NBJ5 622 aa11.17□□□□□ -0.62
CXCL12-203ENST00000374429 C3orf58Q8NDZ4 430 aa11.17□□□□□ -0.62
CXCL12-203ENST00000374429 SEC14L1Q92503 715 aa11.17□□□□□ -0.62
CXCL12-203ENST00000374429 NACA2Q9H009 215 aa11.17□□□□□ -0.62
CXCL12-203ENST00000374429 NRDE2Q9H7Z3 1164 aa11.17□□□□□ -0.62
CXCL12-203ENST00000374429 ZNF358Q9NW07 568 aa11.17□□□□□ -0.62
CXCL12-203ENST00000374429 WDR35Q9P2L0 1181 aa11.17□□□□□ -0.62
CXCL12-203ENST00000374429 PSMC3IPQ9P2W1 217 aaPredicted RBP11.17□□□□□ -0.62
CXCL12-203ENST00000374429 TRIP11Q15643 1979 aa11.17□□□□□ -0.62
CXCL12-203ENST00000374429 MFSD11O43934 449 aa11.17□□□□□ -0.62
CXCL12-203ENST00000374429 TBX18O95935 607 aa11.17□□□□□ -0.62
CXCL12-203ENST00000374429 ASGR1P07306 291 aa11.17□□□□□ -0.62
CXCL12-203ENST00000374429 SP100P23497 879 aaPredicted RBP11.17□□□□□ -0.62
CXCL12-203ENST00000374429 GRM5P41594 1212 aa11.17□□□□□ -0.62
CXCL12-203ENST00000374429 TPI1P60174 286 aa11.17□□□□□ -0.62
CXCL12-203ENST00000374429 GRIK3Q13003 919 aa11.17□□□□□ -0.62
CXCL12-203ENST00000374429 MTDHQ86UE4 582 aaKnown RBP11.17□□□□□ -0.62
CXCL12-203ENST00000374429 FAM228AQ86W67 206 aa11.17□□□□□ -0.62
CXCL12-203ENST00000374429 TNS4Q8IZW8 715 aa11.17□□□□□ -0.62
CXCL12-203ENST00000374429 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.17□□□□□ -0.622e-6■■■□□ 18.6
CXCL12-203ENST00000374429 EXT2Q93063 718 aa11.17□□□□□ -0.62
CXCL12-203ENST00000374429 PCED1BQ96HM7 432 aa11.17□□□□□ -0.62
CXCL12-203ENST00000374429 KCTD15Q96SI1 283 aaPredicted RBP11.17□□□□□ -0.62
CXCL12-203ENST00000374429 TRPV6Q9H1D0 765 aa11.17□□□□□ -0.62
CXCL12-203ENST00000374429 XPNPEP3Q9NQH7 507 aa11.17□□□□□ -0.62
CXCL12-203ENST00000374429 CLUHO75153 1309 aa11.17□□□□□ -0.62
CXCL12-203ENST00000374429 GPR32O75388 356 aa11.16□□□□□ -0.62
CXCL12-203ENST00000374429 CCND3P30281 292 aaPredicted RBP11.16□□□□□ -0.62
CXCL12-203ENST00000374429 CPT1AP50416 773 aa11.16□□□□□ -0.62
CXCL12-203ENST00000374429 BST2Q10589 180 aaKnown RBP11.16□□□□□ -0.62
CXCL12-203ENST00000374429 PREPLQ4J6C6 727 aaPredicted RBP11.16□□□□□ -0.62
CXCL12-203ENST00000374429 THEMIS2Q5TEJ8 643 aa11.16□□□□□ -0.62
CXCL12-203ENST00000374429 FUKQ8N0W3 1084 aa11.16□□□□□ -0.62
CXCL12-203ENST00000374429 TTC13Q8NBP0 860 aa11.16□□□□□ -0.62
CXCL12-203ENST00000374429 OR52K1Q8NGK4 314 aa11.16□□□□□ -0.62
CXCL12-203ENST00000374429 ERLEC1Q96DZ1 483 aa11.16□□□□□ -0.62
CXCL12-203ENST00000374429 TNIP3Q96KP6 325 aa11.16□□□□□ -0.62
CXCL12-203ENST00000374429 SNX27Q96L92 541 aa11.16□□□□□ -0.62
CXCL12-203ENST00000374429 SYT15Q9BQS2 421 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms