RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 MAK16Q9BXY0 300 aaKnown RBP13.03□□□□□ -0.32
PRPF4-202ENST00000374199 TBC1D13Q9NVG8 400 aa13.03□□□□□ -0.32
PRPF4-202ENST00000374199 NAALADL1Q9UQQ1 740 aa13.03□□□□□ -0.32
PRPF4-202ENST00000374199 DOCK4Q8N1I0 1966 aa13.03□□□□□ -0.32
PRPF4-202ENST00000374199 CHD5Q8TDI0 1954 aa13.03□□□□□ -0.32
PRPF4-202ENST00000374199 LTFP02788 710 aa13.03□□□□□ -0.32
PRPF4-202ENST00000374199 VAV1P15498 845 aa13.03□□□□□ -0.32
PRPF4-202ENST00000374199 GRK4P32298 578 aa13.03□□□□□ -0.32
PRPF4-202ENST00000374199 IFFO1Q0D2I5 559 aa13.03□□□□□ -0.32
PRPF4-202ENST00000374199 TADA2BQ86TJ2 420 aa13.03□□□□□ -0.32
PRPF4-202ENST00000374199 CAND1Q86VP6 1230 aaKnown RBP13.03□□□□□ -0.32
PRPF4-202ENST00000374199 ZNF280BQ86YH2 543 aa13.03□□□□□ -0.32
PRPF4-202ENST00000374199 ZBTB9Q96C00 473 aa13.03□□□□□ -0.32
PRPF4-202ENST00000374199 OSBPL2Q9H1P3 480 aa13.03□□□□□ -0.32
PRPF4-202ENST00000374199 ACSS3Q9H6R3 686 aa13.03□□□□□ -0.32
PRPF4-202ENST00000374199 C10orf88Q9H8K7 445 aa13.03□□□□□ -0.32
PRPF4-202ENST00000374199 ETNK2Q9NVF9 386 aa13.03□□□□□ -0.32
PRPF4-202ENST00000374199 PTPRSQ13332 1948 aa13.02□□□□□ -0.32
PRPF4-202ENST00000374199 RGS16O15492 202 aaPredicted RBP13.02□□□□□ -0.32
PRPF4-202ENST00000374199 ACSL3O95573 720 aa13.02□□□□□ -0.32
PRPF4-202ENST00000374199 FAM107AO95990 144 aa13.02□□□□□ -0.32
PRPF4-202ENST00000374199 F9P00740 461 aa13.02□□□□□ -0.32
PRPF4-202ENST00000374199 GSTA2P09210 222 aa13.02□□□□□ -0.32
PRPF4-202ENST00000374199 GOT1P17174 413 aa13.02□□□□□ -0.32
PRPF4-202ENST00000374199 NR1H3Q13133 447 aa13.02□□□□□ -0.32
PRPF4-202ENST00000374199 AFMIDQ63HM1 303 aa13.02□□□□□ -0.32
PRPF4-202ENST00000374199 CYP4X1Q8N118 509 aa13.02□□□□□ -0.32
PRPF4-202ENST00000374199 SIX6OS1Q8N1H7 587 aa13.02□□□□□ -0.32
PRPF4-202ENST00000374199 PYROXD2Q8N2H3 581 aa13.02□□□□□ -0.32
PRPF4-202ENST00000374199 RNF139Q8WU17 664 aa13.02□□□□□ -0.32
PRPF4-202ENST00000374199 LRRC39Q96DD0 335 aa13.02□□□□□ -0.32
PRPF4-202ENST00000374199 VWCEQ96DN2 955 aa13.02□□□□□ -0.32
PRPF4-202ENST00000374199 C8orf48Q96LL4 319 aa13.02□□□□□ -0.32
PRPF4-202ENST00000374199 TMEM209Q96SK2 561 aa13.02□□□□□ -0.32
PRPF4-202ENST00000374199 GORASP1Q9BQQ3 440 aa13.02□□□□□ -0.32
PRPF4-202ENST00000374199 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.02□□□□□ -0.32
PRPF4-202ENST00000374199 F8W810 466 aa13.02□□□□□ -0.33
PRPF4-202ENST00000374199 PRPF4O43172 522 aaKnown RBP eCLIP13.02□□□□□ -0.33
PRPF4-202ENST00000374199 CACNG3O60359 315 aa13.02□□□□□ -0.33
PRPF4-202ENST00000374199 B3GAT3O94766 335 aa13.02□□□□□ -0.33
PRPF4-202ENST00000374199 FGFR3P22607 806 aa13.02□□□□□ -0.33
PRPF4-202ENST00000374199 RBL1P28749 1068 aa13.02□□□□□ -0.33
PRPF4-202ENST00000374199 ARL4CP56559 192 aa13.02□□□□□ -0.33
PRPF4-202ENST00000374199 RNASELQ05823 741 aaKnown RBP13.02□□□□□ -0.33
PRPF4-202ENST00000374199 LONRF1Q17RB8 773 aa13.02□□□□□ -0.33
PRPF4-202ENST00000374199 OVOS1Q6IE37 1185 aa13.02□□□□□ -0.33
PRPF4-202ENST00000374199 SH2D5Q6ZV89 423 aa13.02□□□□□ -0.33
PRPF4-202ENST00000374199 ZNF771Q7L3S4 317 aaPredicted RBP13.02□□□□□ -0.33
PRPF4-202ENST00000374199 METTL23Q86XA0 190 aa13.02□□□□□ -0.33
PRPF4-202ENST00000374199 LRRC4Q9HBW1 653 aa13.02□□□□□ -0.33
PRPF4-202ENST00000374199 STARD7Q9NQZ5 370 aa13.02□□□□□ -0.33
PRPF4-202ENST00000374199 CEP350Q5VT06 3117 aa13.02□□□□□ -0.33
PRPF4-202ENST00000374199 ENPP3O14638 875 aa13.01□□□□□ -0.33
PRPF4-202ENST00000374199 ATP5DP30049 168 aa13.01□□□□□ -0.33
PRPF4-202ENST00000374199 VPS41P49754 854 aa13.01□□□□□ -0.33
PRPF4-202ENST00000374199 CCDC38Q502W7 563 aa13.01□□□□□ -0.33
PRPF4-202ENST00000374199 MSANTD2Q6P1R3 559 aa13.01□□□□□ -0.33
PRPF4-202ENST00000374199 ADGRD1Q6QNK2 874 aa13.01□□□□□ -0.33
PRPF4-202ENST00000374199 RFX8Q6ZV50 586 aa13.01□□□□□ -0.33
PRPF4-202ENST00000374199 DENND1AQ8TEH3 1009 aa13.01□□□□□ -0.33
PRPF4-202ENST00000374199 SMOC2Q9H3U7 446 aa13.01□□□□□ -0.33
PRPF4-202ENST00000374199 SAYSD1Q9NPB0 183 aa13.01□□□□□ -0.33
PRPF4-202ENST00000374199 MARCH5Q9NX47 278 aa13.01□□□□□ -0.33
PRPF4-202ENST00000374199 TIMM13Q9Y5L4 95 aaPredicted RBP13.01□□□□□ -0.33
PRPF4-202ENST00000374199 SPAG6O75602 509 aa13.01□□□□□ -0.33
PRPF4-202ENST00000374199 CYP2C18P33260 490 aa13.01□□□□□ -0.33
PRPF4-202ENST00000374199 FRG1Q14331 258 aaKnown RBP13.01□□□□□ -0.33
PRPF4-202ENST00000374199 DCAF6Q58WW2 860 aa13.01□□□□□ -0.33
PRPF4-202ENST00000374199 STEAP4Q687X5 459 aa13.01□□□□□ -0.33
PRPF4-202ENST00000374199 TRABD2AQ86V40 505 aa13.01□□□□□ -0.33
PRPF4-202ENST00000374199 TMEM175Q9BSA9 504 aa13.01□□□□□ -0.33
PRPF4-202ENST00000374199 OXCT2Q9BYC2 517 aaPredicted RBP13.01□□□□□ -0.33
PRPF4-202ENST00000374199 RHOBTB2Q9BYZ6 727 aa13.01□□□□□ -0.33
PRPF4-202ENST00000374199 BRD8Q9H0E9 1235 aa13.01□□□□□ -0.33
PRPF4-202ENST00000374199 VNN2O95498 520 aa13.01□□□□□ -0.33
PRPF4-202ENST00000374199 MLNP12872 115 aa13.01□□□□□ -0.33
PRPF4-202ENST00000374199 ATP1A2P50993 1020 aa13.01□□□□□ -0.33
PRPF4-202ENST00000374199 CDK16Q00536 496 aa13.01□□□□□ -0.33
PRPF4-202ENST00000374199 ARHGEF6Q15052 776 aa13.01□□□□□ -0.33
PRPF4-202ENST00000374199 DARS2Q6PI48 645 aaKnown RBP13.01□□□□□ -0.33
PRPF4-202ENST00000374199 GLB1LQ6UWU2 654 aa13.01□□□□□ -0.33
PRPF4-202ENST00000374199 C6orf89Q6UWU4 347 aa13.01□□□□□ -0.33
PRPF4-202ENST00000374199 PPP1R21Q6ZMI0 780 aa13.01□□□□□ -0.33
PRPF4-202ENST00000374199 BZW1Q7L1Q6 419 aaKnown RBP13.01□□□□□ -0.33
PRPF4-202ENST00000374199 IGDCC3Q8IVU1 814 aa13.01□□□□□ -0.33
PRPF4-202ENST00000374199 FATE1Q969F0 183 aa13.01□□□□□ -0.33
PRPF4-202ENST00000374199 CEP295NLQ96MC4 621 aa13.01□□□□□ -0.33
PRPF4-202ENST00000374199 COLEC11Q9BWP8 271 aa13.01□□□□□ -0.33
PRPF4-202ENST00000374199 CRISPLD2Q9H0B8 497 aa13.01□□□□□ -0.33
PRPF4-202ENST00000374199 DHX35Q9H5Z1 703 aaKnown RBP13.01□□□□□ -0.33
PRPF4-202ENST00000374199 COMMD8Q9NX08 183 aa13.01□□□□□ -0.33
PRPF4-202ENST00000374199 XPO7Q9UIA9 1087 aaKnown RBP13.01□□□□□ -0.33
PRPF4-202ENST00000374199 MFHAS1Q9Y4C4 1052 aa13.01□□□□□ -0.33
PRPF4-202ENST00000374199 PLXNA4Q9HCM2 1894 aa13.01□□□□□ -0.33
PRPF4-202ENST00000374199 KCNU1A8MYU2 1149 aa13□□□□□ -0.33
PRPF4-202ENST00000374199 H3BRJ5 948 aa13□□□□□ -0.33
PRPF4-202ENST00000374199 M0QYT0 321 aa13□□□□□ -0.33
PRPF4-202ENST00000374199 MFSD11O43934 449 aa13□□□□□ -0.33
PRPF4-202ENST00000374199 PRKCHP24723 683 aa13□□□□□ -0.33
PRPF4-202ENST00000374199 NRLP54845 237 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms