RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 HOXA2O43364 376 aa9.02□□□□□ -0.97
SNRNP40-202ENST00000373720 DGKIO75912 1065 aa9.02□□□□□ -0.97
SNRNP40-202ENST00000373720 GJB6O95452 261 aa9.02□□□□□ -0.97
SNRNP40-202ENST00000373720 TGDSO95455 350 aa9.02□□□□□ -0.97
SNRNP40-202ENST00000373720 INHBAP08476 426 aa9.02□□□□□ -0.97
SNRNP40-202ENST00000373720 TCF4P15884 667 aa9.02□□□□□ -0.97
SNRNP40-202ENST00000373720 ADRA1BP35368 520 aa9.02□□□□□ -0.97
SNRNP40-202ENST00000373720 MAGEA3P43357 314 aa9.02□□□□□ -0.97
SNRNP40-202ENST00000373720 RASSF2P50749 326 aa9.02□□□□□ -0.97
SNRNP40-202ENST00000373720 IFI35P80217 286 aaPredicted RBP9.02□□□□□ -0.97
SNRNP40-202ENST00000373720 BASP1P80723 227 aaKnown RBP9.02□□□□□ -0.97
SNRNP40-202ENST00000373720 ZNF200P98182 395 aaPredicted RBP9.02□□□□□ -0.97
SNRNP40-202ENST00000373720 NRG1Q02297 640 aaPredicted RBP9.02□□□□□ -0.97
SNRNP40-202ENST00000373720 DEUP1Q05D60 604 aa9.02□□□□□ -0.97
SNRNP40-202ENST00000373720 ELAVL2Q12926 359 aaKnown RBP9.02□□□□□ -0.97
SNRNP40-202ENST00000373720 DSC3Q14574 896 aa9.02□□□□□ -0.97
SNRNP40-202ENST00000373720 SMTNL2Q2TAL5 461 aa9.02□□□□□ -0.97
SNRNP40-202ENST00000373720 PRAMEF19Q5SWL8 479 aa9.02□□□□□ -0.97
SNRNP40-202ENST00000373720 TTC39BQ5VTQ0 682 aaPredicted RBP9.02□□□□□ -0.97
SNRNP40-202ENST00000373720 TXNRD3NBQ6F5E7 133 aa9.02□□□□□ -0.97
SNRNP40-202ENST00000373720 CCSAPQ6IQ19 270 aaPredicted RBP9.02□□□□□ -0.97
SNRNP40-202ENST00000373720 VSTM1Q6UX27 236 aa9.02□□□□□ -0.97
SNRNP40-202ENST00000373720 TIFABQ6ZNK6 161 aa9.02□□□□□ -0.97
SNRNP40-202ENST00000373720 CLEC20AQ6ZU45 233 aa9.02□□□□□ -0.97
SNRNP40-202ENST00000373720 UNC45BQ8IWX7 931 aa9.02□□□□□ -0.97
SNRNP40-202ENST00000373720 DCP1BQ8IZD4 617 aaKnown RBP9.02□□□□□ -0.97
SNRNP40-202ENST00000373720 PQLC3Q8N755 202 aa9.02□□□□□ -0.97
SNRNP40-202ENST00000373720 FAM71DQ8N9W8 422 aa9.02□□□□□ -0.97
SNRNP40-202ENST00000373720 ARRDC4Q8NCT1 418 aa9.02□□□□□ -0.97
SNRNP40-202ENST00000373720 C2orf15Q8WU43 125 aaKnown RBP9.02□□□□□ -0.97
SNRNP40-202ENST00000373720 HTR3CQ8WXA8 447 aa9.02□□□□□ -0.97
SNRNP40-202ENST00000373720 ATP2A3Q93084 1043 aa9.02□□□□□ -0.97
SNRNP40-202ENST00000373720 ZBTB10Q96DT7 871 aa9.02□□□□□ -0.97
SNRNP40-202ENST00000373720 C9orf72Q96LT7 481 aa9.02□□□□□ -0.97
SNRNP40-202ENST00000373720 OLFM3Q96PB7 478 aa9.02□□□□□ -0.97
SNRNP40-202ENST00000373720 CSPG4P5Q96PW8 444 aa9.02□□□□□ -0.97
SNRNP40-202ENST00000373720 HAPLN3Q96S86 360 aa9.02□□□□□ -0.97
SNRNP40-202ENST00000373720 EPAS1Q99814 870 aa9.02□□□□□ -0.97
SNRNP40-202ENST00000373720 MED10Q9BTT4 135 aa9.02□□□□□ -0.97
SNRNP40-202ENST00000373720 TRPV6Q9H1D0 765 aa9.02□□□□□ -0.97
SNRNP40-202ENST00000373720 TRABDQ9H4I3 376 aa9.02□□□□□ -0.97
SNRNP40-202ENST00000373720 FAM96AQ9H5X1 160 aa9.02□□□□□ -0.97
SNRNP40-202ENST00000373720 KCNK9Q9NPC2 374 aa9.02□□□□□ -0.97
SNRNP40-202ENST00000373720 DMAP1Q9NPF5 467 aaPredicted RBP9.02□□□□□ -0.97
SNRNP40-202ENST00000373720 RAB6BQ9NRW1 208 aa9.02□□□□□ -0.97
SNRNP40-202ENST00000373720 ABCC13Q9NSE7 274 aa9.02□□□□□ -0.97
SNRNP40-202ENST00000373720 FAM49BQ9NUQ9 324 aa9.02□□□□□ -0.97
SNRNP40-202ENST00000373720 ETNK2Q9NVF9 386 aa9.02□□□□□ -0.97
SNRNP40-202ENST00000373720 NSMCE4AQ9NXX6 385 aa9.02□□□□□ -0.97
SNRNP40-202ENST00000373720 KLHL14Q9P2G3 628 aa9.02□□□□□ -0.97
SNRNP40-202ENST00000373720 IGSF9Q9P2J2 1179 aa9.02□□□□□ -0.97
SNRNP40-202ENST00000373720 DDX20Q9UHI6 824 aaKnown RBP9.02□□□□□ -0.97
SNRNP40-202ENST00000373720 RABGEF1Q9UJ41 708 aa9.02□□□□□ -0.97
SNRNP40-202ENST00000373720 NOD1Q9Y239 953 aa9.02□□□□□ -0.97
SNRNP40-202ENST00000373720 ARL2BPQ9Y2Y0 163 aa9.02□□□□□ -0.97
SNRNP40-202ENST00000373720 USP15Q9Y4E8 981 aaPredicted RBP9.02□□□□□ -0.97
SNRNP40-202ENST00000373720 A0A0A0MRY4 1105 aa9.01□□□□□ -0.97
SNRNP40-202ENST00000373720 SDR42E2A6NKP2 422 aa9.01□□□□□ -0.97
SNRNP40-202ENST00000373720 SYN3O14994 580 aa9.01□□□□□ -0.97
SNRNP40-202ENST00000373720 SPTLC1O15269 473 aa9.01□□□□□ -0.97
SNRNP40-202ENST00000373720 SNX3O60493 162 aa9.01□□□□□ -0.97
SNRNP40-202ENST00000373720 DCTN3O75935 186 aa9.01□□□□□ -0.97
SNRNP40-202ENST00000373720 SNUPNO95149 360 aaKnown RBP9.01□□□□□ -0.97
SNRNP40-202ENST00000373720 ASMTLO95671 621 aa9.01□□□□□ -0.97
SNRNP40-202ENST00000373720 VIMP08670 466 aaKnown RBP9.01□□□□□ -0.97
SNRNP40-202ENST00000373720 SNRPAP09012 282 aaKnown RBP9.01□□□□□ -0.97
SNRNP40-202ENST00000373720 PDGFRBP09619 1106 aa9.01□□□□□ -0.97
SNRNP40-202ENST00000373720 ALADP13716 330 aa9.01□□□□□ -0.97
SNRNP40-202ENST00000373720 SSTR3P32745 418 aaPredicted RBP9.01□□□□□ -0.97
SNRNP40-202ENST00000373720 POLD2P49005 469 aa9.01□□□□□ -0.97
SNRNP40-202ENST00000373720 VPS41P49754 854 aa9.01□□□□□ -0.97
SNRNP40-202ENST00000373720 RGS7P49802 495 aa9.01□□□□□ -0.97
SNRNP40-202ENST00000373720 SULT1E1P49888 294 aa9.01□□□□□ -0.97
SNRNP40-202ENST00000373720 DAOAP59103 153 aa9.01□□□□□ -0.97
SNRNP40-202ENST00000373720 DYNLT1P63172 113 aa9.01□□□□□ -0.97
SNRNP40-202ENST00000373720 FAM189BP81408 668 aa9.01□□□□□ -0.97
SNRNP40-202ENST00000373720 ATP11AP98196 1134 aa9.01□□□□□ -0.97
SNRNP40-202ENST00000373720 SP3Q02447 781 aa9.01□□□□□ -0.97
SNRNP40-202ENST00000373720 TMEM62Q0P6H9 643 aa9.01□□□□□ -0.97
SNRNP40-202ENST00000373720 MTFR1Q15390 333 aa9.01□□□□□ -0.97
SNRNP40-202ENST00000373720 CCL14Q16627 93 aa9.01□□□□□ -0.97
SNRNP40-202ENST00000373720 PDK4Q16654 411 aa9.01□□□□□ -0.97
SNRNP40-202ENST00000373720 C15orf59Q2T9L4 293 aaPredicted RBP9.01□□□□□ -0.97
SNRNP40-202ENST00000373720 FYB2Q5VWT5 728 aa9.01□□□□□ -0.97
SNRNP40-202ENST00000373720 RNF43Q68DV7 783 aa9.01□□□□□ -0.97
SNRNP40-202ENST00000373720 CYP4F22Q6NT55 531 aa9.01□□□□□ -0.97
SNRNP40-202ENST00000373720 LRRC8BQ6P9F7 803 aa9.01□□□□□ -0.97
SNRNP40-202ENST00000373720 GLB1LQ6UWU2 654 aa9.01□□□□□ -0.97
SNRNP40-202ENST00000373720 SLC24A5Q71RS6 500 aa9.01□□□□□ -0.97
SNRNP40-202ENST00000373720 LINC00523Q86TU6 105 aa9.01□□□□□ -0.97
SNRNP40-202ENST00000373720 CHSY1Q86X52 802 aa9.01□□□□□ -0.97
SNRNP40-202ENST00000373720 FBXO36Q8NEA4 188 aa9.01□□□□□ -0.97
SNRNP40-202ENST00000373720 GSDMBQ8TAX9 411 aa9.01□□□□□ -0.97
SNRNP40-202ENST00000373720 URGCPQ8TCY9 931 aa9.01□□□□□ -0.97
SNRNP40-202ENST00000373720 DENND1AQ8TEH3 1009 aa9.01□□□□□ -0.97
SNRNP40-202ENST00000373720 SLC44A1Q8WWI5 657 aa9.01□□□□□ -0.97
SNRNP40-202ENST00000373720 SUSD3Q96L08 255 aa9.01□□□□□ -0.97
SNRNP40-202ENST00000373720 GLT1D1Q96MS3 346 aa9.01□□□□□ -0.97
SNRNP40-202ENST00000373720 SPATA13Q96N96 652 aa9.01□□□□□ -0.97
SNRNP40-202ENST00000373720 PEBP4Q96S96 227 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms