RNA–Protein interactions for RNA: ENST00000373700.8

HERC4-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERC4, Length 3,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-202ENST00000373700 PLEKHA7Q6IQ23 1121 aa8.05□□□□□ -1.12
HERC4-202ENST00000373700 CRELD2Q6UXH1 353 aaPredicted RBP8.05□□□□□ -1.12
HERC4-202ENST00000373700 TSHZ1Q6ZSZ6 1077 aa8.05□□□□□ -1.12
HERC4-202ENST00000373700 SLC26A11Q86WA9 606 aa8.05□□□□□ -1.12
HERC4-202ENST00000373700 ALLCQ8N6M5 410 aa8.05□□□□□ -1.12
HERC4-202ENST00000373700 PCSK9Q8NBP7 692 aaKnown RBP8.05□□□□□ -1.12
HERC4-202ENST00000373700 SH3TC2Q8TF17 1288 aa8.05□□□□□ -1.12
HERC4-202ENST00000373700 CKAP2Q8WWK9 683 aa8.05□□□□□ -1.12
HERC4-202ENST00000373700 VPS39Q96JC1 886 aa8.05□□□□□ -1.12
HERC4-202ENST00000373700 CAPNS2Q96L46 248 aa8.05□□□□□ -1.12
HERC4-202ENST00000373700 LGMNQ99538 433 aa8.05□□□□□ -1.12
HERC4-202ENST00000373700 OSBPL7Q9BZF2 842 aa8.05□□□□□ -1.12
HERC4-202ENST00000373700 GPR88Q9GZN0 384 aa8.05□□□□□ -1.12
HERC4-202ENST00000373700 HAPLN2Q9GZV7 340 aa8.05□□□□□ -1.12
HERC4-202ENST00000373700 ST6GALNAC4Q9H4F1 302 aa8.05□□□□□ -1.12
HERC4-202ENST00000373700 CYP3A43Q9HB55 503 aa8.05□□□□□ -1.12
HERC4-202ENST00000373700 HMX1Q9NP08 348 aaPredicted RBP8.05□□□□□ -1.12
HERC4-202ENST00000373700 ZDHHC18Q9NUE0 388 aa8.05□□□□□ -1.12
HERC4-202ENST00000373700 ADA2Q9NZK5 511 aa8.05□□□□□ -1.12
HERC4-202ENST00000373700 C2orf71A6NGG8 1288 aa8.05□□□□□ -1.12
HERC4-202ENST00000373700 SHOX2O60902 331 aaPredicted RBP8.05□□□□□ -1.12
HERC4-202ENST00000373700 EDN1P05305 212 aa8.05□□□□□ -1.12
HERC4-202ENST00000373700 ATXN8OSP0DMR3 200 aa8.05□□□□□ -1.12
HERC4-202ENST00000373700 ZBTB48P10074 688 aaPredicted RBP8.05□□□□□ -1.12
HERC4-202ENST00000373700 MGAT1P26572 445 aa8.05□□□□□ -1.12
HERC4-202ENST00000373700 C10orf120Q5SQS8 335 aa8.05□□□□□ -1.12
HERC4-202ENST00000373700 UBAP2Q5T6F2 1119 aaKnown RBP8.05□□□□□ -1.12
HERC4-202ENST00000373700 FAM171A1Q5VUB5 890 aa8.05□□□□□ -1.12
HERC4-202ENST00000373700 POU5F2Q8N7G0 328 aa8.05□□□□□ -1.12
HERC4-202ENST00000373700 KAT2BQ92831 832 aa8.05□□□□□ -1.12
HERC4-202ENST00000373700 SPDL1Q96EA4 605 aa8.05□□□□□ -1.12
HERC4-202ENST00000373700 DEFB118Q96PH6 123 aa8.05□□□□□ -1.12
HERC4-202ENST00000373700 ZIC5Q96T25 663 aa8.05□□□□□ -1.12
HERC4-202ENST00000373700 TUBB6Q9BUF5 446 aa8.05□□□□□ -1.12
HERC4-202ENST00000373700 MYLK2Q9H1R3 596 aa8.05□□□□□ -1.12
HERC4-202ENST00000373700 FAM8A1Q9UBU6 413 aa8.05□□□□□ -1.12
HERC4-202ENST00000373700 TMEM59LQ9UK28 342 aa8.05□□□□□ -1.12
HERC4-202ENST00000373700 COQ4Q9Y3A0 265 aa8.05□□□□□ -1.12
HERC4-202ENST00000373700 PCDHB7Q9Y5E2 793 aa8.05□□□□□ -1.12
HERC4-202ENST00000373700 BRWD3Q6RI45 1802 aa8.05□□□□□ -1.12
HERC4-202ENST00000373700 UBR3Q6ZT12 1888 aa8.04□□□□□ -1.12
HERC4-202ENST00000373700 HOXC6P09630 235 aa8.04□□□□□ -1.12
HERC4-202ENST00000373700 ENO3P13929 434 aaPredicted RBP8.04□□□□□ -1.12
HERC4-202ENST00000373700 EFEMP1Q12805 493 aa8.04□□□□□ -1.12
HERC4-202ENST00000373700 ILDR2Q71H61 639 aa8.04□□□□□ -1.12
HERC4-202ENST00000373700 ZNF572Q7Z3I7 529 aaPredicted RBP8.04□□□□□ -1.12
HERC4-202ENST00000373700 IFNL1Q8IU54 200 aa8.04□□□□□ -1.12
HERC4-202ENST00000373700 PTPRN2Q92932 1015 aa8.04□□□□□ -1.12
HERC4-202ENST00000373700 SRPK1Q96SB4 655 aaKnown RBP8.04□□□□□ -1.12
HERC4-202ENST00000373700 PTPN18Q99952 460 aa8.04□□□□□ -1.12
HERC4-202ENST00000373700 MECRQ9BV79 373 aa8.04□□□□□ -1.12
HERC4-202ENST00000373700 TMEM120AQ9BXJ8 343 aa8.04□□□□□ -1.12
HERC4-202ENST00000373700 TRPV6Q9H1D0 765 aa8.04□□□□□ -1.12
HERC4-202ENST00000373700 FAM105AQ9NUU6 356 aa8.04□□□□□ -1.12
HERC4-202ENST00000373700 SMPD4Q9NXE4 827 aa8.04□□□□□ -1.12
HERC4-202ENST00000373700 TRPV2Q9Y5S1 764 aa8.04□□□□□ -1.12
HERC4-202ENST00000373700 TUBGCP6Q96RT7 1819 aa8.04□□□□□ -1.12
HERC4-202ENST00000373700 ATP8B3O60423 1300 aa8.04□□□□□ -1.12
HERC4-202ENST00000373700 PRRG1O14668 218 aa8.04□□□□□ -1.12
HERC4-202ENST00000373700 GMNNO75496 209 aa8.04□□□□□ -1.12
HERC4-202ENST00000373700 SKAP2O75563 359 aaPredicted RBP8.04□□□□□ -1.12
HERC4-202ENST00000373700 PNPLA4P41247 253 aa8.04□□□□□ -1.12
HERC4-202ENST00000373700 SERPINB4P48594 390 aa8.04□□□□□ -1.12
HERC4-202ENST00000373700 GDF10P55107 478 aa8.04□□□□□ -1.12
HERC4-202ENST00000373700 YWHAZP63104 245 aaKnown RBP8.04□□□□□ -1.12
HERC4-202ENST00000373700 FKBP1BP68106 108 aa8.04□□□□□ -1.12
HERC4-202ENST00000373700 MRPS6P82932 125 aaKnown RBP8.04□□□□□ -1.12
HERC4-202ENST00000373700 SLC6A3Q01959 620 aa8.04□□□□□ -1.12
HERC4-202ENST00000373700 YWHAHQ04917 246 aaPredicted RBP8.04□□□□□ -1.12
HERC4-202ENST00000373700 GAD2Q05329 585 aa8.04□□□□□ -1.12
HERC4-202ENST00000373700 BST2Q10589 180 aaKnown RBP8.04□□□□□ -1.12
HERC4-202ENST00000373700 PDK2Q15119 407 aa8.04□□□□□ -1.12
HERC4-202ENST00000373700 CTXN3Q4LDR2 81 aa8.04□□□□□ -1.12
HERC4-202ENST00000373700 ZNF618Q5T7W0 954 aa8.04□□□□□ -1.12
HERC4-202ENST00000373700 AGGF1Q8N302 714 aaeCLIP8.04□□□□□ -1.12
HERC4-202ENST00000373700 GIPC2Q8TF65 315 aa8.04□□□□□ -1.12
HERC4-202ENST00000373700 CLEC4CQ8WTT0 213 aa8.04□□□□□ -1.12
HERC4-202ENST00000373700 SP110Q9HB58 689 aa8.04□□□□□ -1.12
HERC4-202ENST00000373700 RXFP1Q9HBX9 757 aa8.04□□□□□ -1.12
HERC4-202ENST00000373700 ACSS2Q9NR19 701 aa8.04□□□□□ -1.12
HERC4-202ENST00000373700 SLC17A7Q9P2U7 560 aa8.04□□□□□ -1.12
HERC4-202ENST00000373700 IPO11Q9UI26 975 aaKnown RBP8.04□□□□□ -1.12
HERC4-202ENST00000373700 SLC24A2Q9UI40 661 aa8.04□□□□□ -1.12
HERC4-202ENST00000373700 GRID1Q9ULK0 1009 aa8.04□□□□□ -1.12
HERC4-202ENST00000373700 PADI3Q9ULW8 664 aa8.04□□□□□ -1.12
HERC4-202ENST00000373700 THSD7AQ9UPZ6 1657 aa8.04□□□□□ -1.12
HERC4-202ENST00000373700 ADAMTSL1Q8N6G6 1762 aa8.04□□□□□ -1.12
HERC4-202ENST00000373700 TMEM88BA6NKF7 163 aa8.04□□□□□ -1.12
HERC4-202ENST00000373700 SDR42E2A6NKP2 422 aa8.04□□□□□ -1.12
HERC4-202ENST00000373700 TBKBP1A7MCY6 615 aa8.04□□□□□ -1.12
HERC4-202ENST00000373700 SPTLC1O15269 473 aa8.04□□□□□ -1.12
HERC4-202ENST00000373700 CNMDO75829 334 aa8.04□□□□□ -1.12
HERC4-202ENST00000373700 LUC7L3O95232 432 aaKnown RBP8.04□□□□□ -1.12
HERC4-202ENST00000373700 ATP6V1G2O95670 118 aa8.04□□□□□ -1.12
HERC4-202ENST00000373700 TRUB2O95900 331 aaKnown RBP8.04□□□□□ -1.12
HERC4-202ENST00000373700 PAEPP09466 180 aa8.04□□□□□ -1.12
HERC4-202ENST00000373700 IQCF3P0C7M6 154 aa8.04□□□□□ -1.12
HERC4-202ENST00000373700 ODC1P11926 461 aa8.04□□□□□ -1.12
HERC4-202ENST00000373700 ATICP31939 592 aa8.04□□□□□ -1.12
HERC4-202ENST00000373700 ACADSBP45954 432 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms