RNA–Protein interactions for RNA: ENST00000372216.8

COL4A6-202, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-202ENST00000372216 IQCMA0A1B0GVH7 501 aa10.07□□□□□ -0.8
COL4A6-202ENST00000372216 CAND2O75155 1236 aa10.07□□□□□ -0.8
COL4A6-202ENST00000372216 CRTAMO95727 393 aa10.07□□□□□ -0.8
COL4A6-202ENST00000372216 NEK2P51955 445 aa10.07□□□□□ -0.8
COL4A6-202ENST00000372216 MYBPC2Q14324 1141 aa10.07□□□□□ -0.8
COL4A6-202ENST00000372216 KIAA1324Q6UXG2 1013 aaKnown RBP10.07□□□□□ -0.8
COL4A6-202ENST00000372216 MARK2Q7KZI7 788 aaKnown RBP10.07□□□□□ -0.8
COL4A6-202ENST00000372216 TFAP2DQ7Z6R9 452 aa10.07□□□□□ -0.8
COL4A6-202ENST00000372216 KIRREL3Q8IZU9 778 aa10.07□□□□□ -0.8
COL4A6-202ENST00000372216 PDLIM2Q96JY6 352 aa10.07□□□□□ -0.8
COL4A6-202ENST00000372216 YIPF3Q9GZM5 350 aa10.07□□□□□ -0.8
COL4A6-202ENST00000372216 ISCUQ9H1K1 167 aa10.07□□□□□ -0.8
COL4A6-202ENST00000372216 RUVBL2Q9Y230 463 aaKnown RBP10.07□□□□□ -0.8
COL4A6-202ENST00000372216 TSC22D2O75157 780 aa10.06□□□□□ -0.8
COL4A6-202ENST00000372216 CNTN1Q12860 1018 aa10.06□□□□□ -0.8
COL4A6-202ENST00000372216 INPP5AQ14642 412 aa10.06□□□□□ -0.8
COL4A6-202ENST00000372216 CHI3L2Q15782 390 aa10.06□□□□□ -0.8
COL4A6-202ENST00000372216 GSTA3Q16772 222 aa10.06□□□□□ -0.8
COL4A6-202ENST00000372216 AP1ARQ63HQ0 302 aa10.06□□□□□ -0.8
COL4A6-202ENST00000372216 CCNI2Q6ZMN8 369 aaPredicted RBP10.06□□□□□ -0.8
COL4A6-202ENST00000372216 ABRAQ8N0Z2 381 aa10.06□□□□□ -0.8
COL4A6-202ENST00000372216 CELF6Q96J87 481 aaKnown RBP10.06□□□□□ -0.8
COL4A6-202ENST00000372216 ASB7Q9H672 318 aa10.06□□□□□ -0.8
COL4A6-202ENST00000372216 IL1RAPL1Q9NZN1 696 aa10.06□□□□□ -0.8
COL4A6-202ENST00000372216 RPS6KL1Q9Y6S9 549 aa10.06□□□□□ -0.8
COL4A6-202ENST00000372216 GNG14A0A1W2PPG7 69 aa10.06□□□□□ -0.8
COL4A6-202ENST00000372216 KATNA1O75449 491 aa10.06□□□□□ -0.8
COL4A6-202ENST00000372216 ITGALP20701 1170 aa10.06□□□□□ -0.8
COL4A6-202ENST00000372216 GLRBP48167 497 aa10.06□□□□□ -0.8
COL4A6-202ENST00000372216 SCNN1BP51168 640 aa10.06□□□□□ -0.8
COL4A6-202ENST00000372216 CCL23P55773 120 aa10.06□□□□□ -0.8
COL4A6-202ENST00000372216 HIC1Q14526 733 aa10.06□□□□□ -0.8
COL4A6-202ENST00000372216 SETD3Q86TU7 594 aaPredicted RBP10.06□□□□□ -0.8
COL4A6-202ENST00000372216 LPCAT1Q8NF37 534 aa10.06□□□□□ -0.8
COL4A6-202ENST00000372216 DNAJC1Q96KC8 554 aaKnown RBP10.06□□□□□ -0.8
COL4A6-202ENST00000372216 UMODL1Q5DID0 1318 aa10.06□□□□□ -0.8
COL4A6-202ENST00000372216 ANKRD63C9JTQ0 380 aa10.06□□□□□ -0.8
COL4A6-202ENST00000372216 VPS26AO75436 327 aa10.06□□□□□ -0.8
COL4A6-202ENST00000372216 SMNDC1O75940 238 aaKnown RBP eCLIP10.06□□□□□ -0.8
COL4A6-202ENST00000372216 HDAC4P56524 1084 aa10.06□□□□□ -0.8
COL4A6-202ENST00000372216 RNF44Q7L0R7 432 aa10.06□□□□□ -0.8
COL4A6-202ENST00000372216 ZNF571Q7Z3V5 609 aaPredicted RBP10.06□□□□□ -0.8
COL4A6-202ENST00000372216 MKL1Q969V6 931 aa10.06□□□□□ -0.8
COL4A6-202ENST00000372216 APOL2Q9BQE5 337 aa10.06□□□□□ -0.8
COL4A6-202ENST00000372216 MRPL17Q9NRX2 175 aaKnown RBP10.06□□□□□ -0.8
COL4A6-202ENST00000372216 KRT84Q9NSB2 600 aa10.06□□□□□ -0.8
COL4A6-202ENST00000372216 PAIP2BQ9ULR5 123 aaKnown RBP10.06□□□□□ -0.8
COL4A6-202ENST00000372216 DYRK1BQ9Y463 629 aa10.06□□□□□ -0.8
COL4A6-202ENST00000372216 NR2E3Q9Y5X4 410 aa10.06□□□□□ -0.8
COL4A6-202ENST00000372216 RIC1Q4ADV7 1423 aa10.06□□□□□ -0.8
COL4A6-202ENST00000372216 PDZK1P1A8MUH7 402 aa10.06□□□□□ -0.8
COL4A6-202ENST00000372216 AGAP9Q5VTM2 703 aa10.06□□□□□ -0.8
COL4A6-202ENST00000372216 ZPBP2Q6X784 338 aa10.06□□□□□ -0.8
COL4A6-202ENST00000372216 MYO1HQ8N1T3 1032 aa10.06□□□□□ -0.8
COL4A6-202ENST00000372216 SLC2A14Q8TDB8 520 aa10.06□□□□□ -0.8
COL4A6-202ENST00000372216 FRMD8Q9BZ67 464 aaPredicted RBP10.06□□□□□ -0.8
COL4A6-202ENST00000372216 ELOVL4Q9GZR5 314 aa10.06□□□□□ -0.8
COL4A6-202ENST00000372216 RNPEPQ9H4A4 650 aa10.06□□□□□ -0.8
COL4A6-202ENST00000372216 CAAP1Q9H8G2 361 aa10.06□□□□□ -0.8
COL4A6-202ENST00000372216 POLR1DQ9Y2S0 133 aa10.06□□□□□ -0.8
COL4A6-202ENST00000372216 SDR42E2A6NKP2 422 aa10.06□□□□□ -0.8
COL4A6-202ENST00000372216 RECQL4O94761 1208 aa10.06□□□□□ -0.8
COL4A6-202ENST00000372216 FLT3P36888 993 aa10.06□□□□□ -0.8
COL4A6-202ENST00000372216 SCNN1GP51170 649 aa10.06□□□□□ -0.8
COL4A6-202ENST00000372216 NOGQ13253 232 aa10.06□□□□□ -0.8
COL4A6-202ENST00000372216 DDI2Q5TDH0 399 aa10.06□□□□□ -0.8
COL4A6-202ENST00000372216 SH2D3CQ8N5H7 860 aa10.06□□□□□ -0.8
COL4A6-202ENST00000372216 FBXO36Q8NEA4 188 aa10.06□□□□□ -0.8
COL4A6-202ENST00000372216 THTPAQ9BU02 230 aa10.06□□□□□ -0.8
COL4A6-202ENST00000372216 REXO4Q9GZR2 422 aaKnown RBP10.06□□□□□ -0.8
COL4A6-202ENST00000372216 TMEM88BA6NKF7 163 aa10.05□□□□□ -0.8
COL4A6-202ENST00000372216 PROSCO94903 275 aa10.05□□□□□ -0.8
COL4A6-202ENST00000372216 JCHAINP01591 159 aa10.05□□□□□ -0.8
COL4A6-202ENST00000372216 PRKAR2AP13861 404 aaKnown RBP10.05□□□□□ -0.8
COL4A6-202ENST00000372216 CTSEP14091 401 aa10.05□□□□□ -0.8
COL4A6-202ENST00000372216 BDNFP23560 247 aa10.05□□□□□ -0.8
COL4A6-202ENST00000372216 MDH1P40925 334 aaKnown RBP10.05□□□□□ -0.8
COL4A6-202ENST00000372216 GSSP48637 474 aa10.05□□□□□ -0.8
COL4A6-202ENST00000372216 ICE2Q659A1 982 aa10.05□□□□□ -0.8
COL4A6-202ENST00000372216 LGI2Q8N0V4 545 aa10.05□□□□□ -0.8
COL4A6-202ENST00000372216 GAD1Q99259 594 aa10.05□□□□□ -0.8
COL4A6-202ENST00000372216 CLPBQ9H078 707 aa10.05□□□□□ -0.8
COL4A6-202ENST00000372216 KRT33AO76009 404 aa10.05□□□□□ -0.8
COL4A6-202ENST00000372216 EIF2S1P05198 315 aaKnown RBP10.05□□□□□ -0.8
COL4A6-202ENST00000372216 CLUP10909 449 aa10.05□□□□□ -0.8
COL4A6-202ENST00000372216 PGM1P36871 562 aa10.05□□□□□ -0.8
COL4A6-202ENST00000372216 RENBPP51606 427 aa10.05□□□□□ -0.8
COL4A6-202ENST00000372216 CDH8P55286 799 aa10.05□□□□□ -0.8
COL4A6-202ENST00000372216 SRSF11Q05519 484 aaKnown RBP10.05□□□□□ -0.8
COL4A6-202ENST00000372216 ACTN3Q08043 901 aaPredicted RBP10.05□□□□□ -0.8
COL4A6-202ENST00000372216 TMEM154Q6P9G4 183 aa10.05□□□□□ -0.8
COL4A6-202ENST00000372216 EFL1Q7Z2Z2 1120 aaKnown RBP10.05□□□□□ -0.8
COL4A6-202ENST00000372216 BRSK2Q8IWQ3 736 aa10.05□□□□□ -0.8
COL4A6-202ENST00000372216 RELTQ969Z4 430 aa10.05□□□□□ -0.8
COL4A6-202ENST00000372216 ROPN1BQ9BZX4 212 aaPredicted RBP10.05□□□□□ -0.8
COL4A6-202ENST00000372216 UBE2OQ9C0C9 1292 aaKnown RBP10.05□□□□□ -0.8
COL4A6-202ENST00000372216 PORCNQ9H237 461 aa10.05□□□□□ -0.8
COL4A6-202ENST00000372216 ROPN1Q9HAT0 212 aaPredicted RBP10.05□□□□□ -0.8
COL4A6-202ENST00000372216 TBC1D13Q9NVG8 400 aa10.05□□□□□ -0.8
COL4A6-202ENST00000372216 ATP6V1HQ9UI12 483 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms