RNA–Protein interactions for RNA: ENST00000371621.4

PTPN1-201, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN1, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-201ENST00000371621 KMT5AQ9NQR1 393 aa12.11□□□□□ -0.47
PTPN1-201ENST00000371621 DPP3Q9NY33 737 aa12.11□□□□□ -0.47
PTPN1-201ENST00000371621 CDYLQ9Y232 598 aa12.11□□□□□ -0.47
PTPN1-201ENST00000371621 TISP43B9A030 160 aa12.11□□□□□ -0.47
PTPN1-201ENST00000371621 CLIC3O95833 236 aa12.11□□□□□ -0.47
PTPN1-201ENST00000371621 CYP2C9P11712 490 aa12.11□□□□□ -0.47
PTPN1-201ENST00000371621 FXR2P51116 673 aaKnown RBP eCLIP12.11□□□□□ -0.471e-7■□□□□ 8.8
PTPN1-201ENST00000371621 ZNF423Q2M1K9 1284 aa12.11□□□□□ -0.47
PTPN1-201ENST00000371621 SUSD4Q5VX71 490 aa12.11□□□□□ -0.47
PTPN1-201ENST00000371621 SDE2Q6IQ49 451 aa12.11□□□□□ -0.47
PTPN1-201ENST00000371621 PADI6Q6TGC4 694 aa12.11□□□□□ -0.47
PTPN1-201ENST00000371621 TRIM63Q969Q1 353 aa12.11□□□□□ -0.47
PTPN1-201ENST00000371621 ATP6V1E2Q96A05 226 aa12.11□□□□□ -0.47
PTPN1-201ENST00000371621 FAM84AQ96KN4 292 aa12.11□□□□□ -0.47
PTPN1-201ENST00000371621 COQ10BQ9H8M1 238 aa12.11□□□□□ -0.47
PTPN1-201ENST00000371621 ITM2CQ9NQX7 267 aa12.11□□□□□ -0.47
PTPN1-201ENST00000371621 TBC1D14Q9P2M4 693 aa12.11□□□□□ -0.47
PTPN1-201ENST00000371621 SERPINB13Q9UIV8 391 aa12.11□□□□□ -0.47
PTPN1-201ENST00000371621 CDC14AQ9UNH5 594 aa12.11□□□□□ -0.47
PTPN1-201ENST00000371621 FAM86B1E9PN63 330 aa12.11□□□□□ -0.47
PTPN1-201ENST00000371621 ANGPT2O15123 496 aa12.11□□□□□ -0.47
PTPN1-201ENST00000371621 PRPF4O43172 522 aaKnown RBP eCLIP12.11□□□□□ -0.47
PTPN1-201ENST00000371621 H6PDO95479 791 aa12.11□□□□□ -0.47
PTPN1-201ENST00000371621 PSMA4P25789 261 aaKnown RBP12.11□□□□□ -0.47
PTPN1-201ENST00000371621 HOXA7P31268 230 aaPredicted RBP12.11□□□□□ -0.47
PTPN1-201ENST00000371621 GLRA4Q5JXX5 417 aa12.11□□□□□ -0.47
PTPN1-201ENST00000371621 SCARA3Q6AZY7 606 aa12.11□□□□□ -0.47
PTPN1-201ENST00000371621 HORMAD1Q86X24 394 aa12.11□□□□□ -0.47
PTPN1-201ENST00000371621 TNS4Q8IZW8 715 aa12.11□□□□□ -0.47
PTPN1-201ENST00000371621 TNIP2Q8NFZ5 429 aa12.11□□□□□ -0.47
PTPN1-201ENST00000371621 OR7A2PQ8NGA2 310 aa12.11□□□□□ -0.47
PTPN1-201ENST00000371621 PLEKHO2Q8TD55 490 aa12.11□□□□□ -0.47
PTPN1-201ENST00000371621 PSPC1Q8WXF1 523 aaKnown RBP12.11□□□□□ -0.47
PTPN1-201ENST00000371621 DCPSQ96C86 337 aaKnown RBP12.11□□□□□ -0.47
PTPN1-201ENST00000371621 CD209Q9NNX6 404 aa12.11□□□□□ -0.47
PTPN1-201ENST00000371621 MAFGO15525 162 aa12.1□□□□□ -0.47
PTPN1-201ENST00000371621 DGKDQ16760 1214 aa12.1□□□□□ -0.47
PTPN1-201ENST00000371621 PPP1R18Q6NYC8 613 aa12.1□□□□□ -0.47
PTPN1-201ENST00000371621 TMEM35BQ8NCS4 154 aa12.1□□□□□ -0.47
PTPN1-201ENST00000371621 APPL2Q8NEU8 664 aa12.1□□□□□ -0.47
PTPN1-201ENST00000371621 TEKT3Q9BXF9 490 aa12.1□□□□□ -0.47
PTPN1-201ENST00000371621 AJAP1Q9UKB5 411 aaPredicted RBP12.1□□□□□ -0.47
PTPN1-201ENST00000371621 BTNL10A8MVZ5 291 aa12.1□□□□□ -0.47
PTPN1-201ENST00000371621 CPA3P15088 417 aa12.1□□□□□ -0.47
PTPN1-201ENST00000371621 SCNN1DP51172 638 aa12.1□□□□□ -0.47
PTPN1-201ENST00000371621 GK3PQ14409 553 aa12.1□□□□□ -0.47
PTPN1-201ENST00000371621 IMPG1Q17R60 797 aa12.1□□□□□ -0.47
PTPN1-201ENST00000371621 DCAF6Q58WW2 860 aa12.1□□□□□ -0.47
PTPN1-201ENST00000371621 SLCO6A1Q86UG4 719 aa12.1□□□□□ -0.47
PTPN1-201ENST00000371621 TERB1Q8NA31 727 aa12.1□□□□□ -0.47
PTPN1-201ENST00000371621 TDRD5Q8NAT2 981 aaKnown RBP12.1□□□□□ -0.47
PTPN1-201ENST00000371621 FAM149B1Q96BN6 582 aa12.1□□□□□ -0.47
PTPN1-201ENST00000371621 KLHL32Q96NJ5 620 aa12.1□□□□□ -0.47
PTPN1-201ENST00000371621 MIR1-1HGQ9H1L0 117 aa12.1□□□□□ -0.47
PTPN1-201ENST00000371621 EBF1Q9UH73 591 aa12.1□□□□□ -0.47
PTPN1-201ENST00000371621 MAD2L2Q9UI95 211 aa12.1□□□□□ -0.47
PTPN1-201ENST00000371621 NRXN3Q9Y4C0 1643 aa12.1□□□□□ -0.47
PTPN1-201ENST00000371621 XIAPP98170 497 aa12.1□□□□□ -0.47
PTPN1-201ENST00000371621 MADCAM1Q13477 382 aa12.1□□□□□ -0.47
PTPN1-201ENST00000371621 SEL1L3Q68CR1 1132 aa12.1□□□□□ -0.47
PTPN1-201ENST00000371621 CCSAPQ6IQ19 270 aaPredicted RBP12.1□□□□□ -0.47
PTPN1-201ENST00000371621 CES3Q6UWW8 571 aa12.1□□□□□ -0.47
PTPN1-201ENST00000371621 ADGRF4Q8IZF3 695 aa12.1□□□□□ -0.47
PTPN1-201ENST00000371621 LENG8Q96PV6 779 aaPredicted RBP12.1□□□□□ -0.47
PTPN1-201ENST00000371621 HAPLN3Q96S86 360 aa12.1□□□□□ -0.47
PTPN1-201ENST00000371621 TBCCD1Q9NVR7 557 aa12.1□□□□□ -0.47
PTPN1-201ENST00000371621 ERVV-2B6SEH9 535 aa12.09□□□□□ -0.47
PTPN1-201ENST00000371621 TBC1D4O60343 1298 aa12.09□□□□□ -0.47
PTPN1-201ENST00000371621 SRP72O76094 671 aaKnown RBP12.09□□□□□ -0.47
PTPN1-201ENST00000371621 CCT3P49368 545 aaKnown RBP12.09□□□□□ -0.47
PTPN1-201ENST00000371621 ACTR2P61160 394 aa12.09□□□□□ -0.47
PTPN1-201ENST00000371621 ZNF829Q3KNS6 432 aaPredicted RBP12.09□□□□□ -0.47
PTPN1-201ENST00000371621 CIAPIN1Q6FI81 312 aa12.09□□□□□ -0.47
PTPN1-201ENST00000371621 TPTE2Q6XPS3 522 aa12.09□□□□□ -0.47
PTPN1-201ENST00000371621 C4orf32Q8N8J7 132 aa12.09□□□□□ -0.47
PTPN1-201ENST00000371621 ZNF555Q8NEP9 628 aa12.09□□□□□ -0.47
PTPN1-201ENST00000371621 LRTOMTQ8WZ04 291 aa12.09□□□□□ -0.47
PTPN1-201ENST00000371621 ROGDIQ9GZN7 287 aa12.09□□□□□ -0.47
PTPN1-201ENST00000371621 KCNMB3Q9NPA1 279 aa12.09□□□□□ -0.47
PTPN1-201ENST00000371621 C12orf4Q9NQ89 552 aa12.09□□□□□ -0.47
PTPN1-201ENST00000371621 TOPORSQ9NS56 1045 aaPredicted RBP12.09□□□□□ -0.47
PTPN1-201ENST00000371621 EGFL7Q9UHF1 273 aa12.09□□□□□ -0.47
PTPN1-201ENST00000371621 RAB26Q9ULW5 256 aa12.09□□□□□ -0.47
PTPN1-201ENST00000371621 FNDC3AQ9Y2H6 1198 aaKnown RBP12.09□□□□□ -0.47
PTPN1-201ENST00000371621 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.09□□□□□ -0.47
PTPN1-201ENST00000371621 MYH15Q9Y2K3 1946 aa12.09□□□□□ -0.47
PTPN1-201ENST00000371621 OAS1P00973 400 aaKnown RBP12.09□□□□□ -0.47
PTPN1-201ENST00000371621 GZMAP12544 262 aa12.09□□□□□ -0.47
PTPN1-201ENST00000371621 GARTP22102 1010 aa12.09□□□□□ -0.47
PTPN1-201ENST00000371621 SLC5A2P31639 672 aa12.09□□□□□ -0.47
PTPN1-201ENST00000371621 ARMC4Q5T2S8 1044 aa12.09□□□□□ -0.47
PTPN1-201ENST00000371621 TMTC4Q5T4D3 741 aa12.09□□□□□ -0.47
PTPN1-201ENST00000371621 HAUS6Q7Z4H7 955 aa12.09□□□□□ -0.47
PTPN1-201ENST00000371621 STK32CQ86UX6 486 aa12.09□□□□□ -0.47
PTPN1-201ENST00000371621 NPAS2Q99743 824 aa12.09□□□□□ -0.47
PTPN1-201ENST00000371621 SLC39A10Q9ULF5 831 aa12.09□□□□□ -0.47
PTPN1-201ENST00000371621 SHOC2Q9UQ13 582 aa12.09□□□□□ -0.47
PTPN1-201ENST00000371621 GINS2Q9Y248 185 aa12.09□□□□□ -0.47
PTPN1-201ENST00000371621 KIF13AQ9H1H9 1805 aa12.09□□□□□ -0.47
PTPN1-201ENST00000371621 STX16-NPEPL1H3BU86 382 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms