RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 ZBTB6Q15916 424 aa12.16□□□□□ -0.46
PDE6C-201ENST00000371447 SDHAF4Q5VUM1 108 aa12.16□□□□□ -0.46
PDE6C-201ENST00000371447 OTOAQ7RTW8 1153 aa12.16□□□□□ -0.46
PDE6C-201ENST00000371447 SPNS2Q8IVW8 549 aa12.16□□□□□ -0.46
PDE6C-201ENST00000371447 C3orf58Q8NDZ4 430 aa12.16□□□□□ -0.46
PDE6C-201ENST00000371447 KDM4CQ9H3R0 1056 aa12.16□□□□□ -0.46
PDE6C-201ENST00000371447 PIGVQ9NUD9 493 aa12.16□□□□□ -0.46
PDE6C-201ENST00000371447 TMEM30AQ9NV96 361 aa12.16□□□□□ -0.46
PDE6C-201ENST00000371447 GEMIN8Q9NWZ8 242 aaKnown RBP12.16□□□□□ -0.46
PDE6C-201ENST00000371447 COL1A2P08123 1366 aa12.15□□□□□ -0.46
PDE6C-201ENST00000371447 COPEO14579 308 aa12.15□□□□□ -0.46
PDE6C-201ENST00000371447 ATP9BO43861 1147 aa12.15□□□□□ -0.46
PDE6C-201ENST00000371447 BDNFP23560 247 aa12.15□□□□□ -0.46
PDE6C-201ENST00000371447 CD52P31358 61 aa12.15□□□□□ -0.46
PDE6C-201ENST00000371447 CPA2P48052 419 aa12.15□□□□□ -0.46
PDE6C-201ENST00000371447 MTFR1Q15390 333 aa12.15□□□□□ -0.46
PDE6C-201ENST00000371447 EFHC2Q5JST6 749 aa12.15□□□□□ -0.46
PDE6C-201ENST00000371447 MTDHQ86UE4 582 aaKnown RBP12.15□□□□□ -0.46
PDE6C-201ENST00000371447 CAND1Q86VP6 1230 aaKnown RBP12.15□□□□□ -0.46
PDE6C-201ENST00000371447 DNAAF3Q8N9W5 541 aa12.15□□□□□ -0.46
PDE6C-201ENST00000371447 COLGALT1Q8NBJ5 622 aa12.15□□□□□ -0.46
PDE6C-201ENST00000371447 EMID1Q96A84 441 aaPredicted RBP12.15□□□□□ -0.46
PDE6C-201ENST00000371447 LRRC37BQ96QE4 947 aa12.15□□□□□ -0.46
PDE6C-201ENST00000371447 FOXP3Q9BZS1 431 aa12.15□□□□□ -0.46
PDE6C-201ENST00000371447 SMYD2Q9NRG4 433 aa12.15□□□□□ -0.46
PDE6C-201ENST00000371447 KLHL8Q9P2G9 620 aaPredicted RBP12.15□□□□□ -0.46
PDE6C-201ENST00000371447 CFAP69A5D8W1 941 aa12.15□□□□□ -0.46
PDE6C-201ENST00000371447 PIRO00625 290 aa12.15□□□□□ -0.46
PDE6C-201ENST00000371447 OR4Q2P0C623 313 aa12.15□□□□□ -0.46
PDE6C-201ENST00000371447 CSH1P0DML2 217 aa12.15□□□□□ -0.46
PDE6C-201ENST00000371447 CSH2P0DML3 217 aa12.15□□□□□ -0.46
PDE6C-201ENST00000371447 MGAT1P26572 445 aa12.15□□□□□ -0.46
PDE6C-201ENST00000371447 PSMB4P28070 264 aa12.15□□□□□ -0.46
PDE6C-201ENST00000371447 ITIH4Q14624 930 aa12.15□□□□□ -0.46
PDE6C-201ENST00000371447 SV2CQ496J9 727 aa12.15□□□□□ -0.46
PDE6C-201ENST00000371447 PKDCCQ504Y2 493 aa12.15□□□□□ -0.46
PDE6C-201ENST00000371447 LRRC52Q8N7C0 313 aa12.15□□□□□ -0.46
PDE6C-201ENST00000371447 AGR3Q8TD06 166 aa12.15□□□□□ -0.46
PDE6C-201ENST00000371447 GTF3C2Q8WUA4 911 aaPredicted RBP12.15□□□□□ -0.46
PDE6C-201ENST00000371447 PRDM12Q9H4Q4 367 aa12.15□□□□□ -0.46
PDE6C-201ENST00000371447 AGO3Q9H9G7 860 aaKnown RBP12.15□□□□□ -0.46
PDE6C-201ENST00000371447 EURLQ9NYK6 297 aa12.15□□□□□ -0.46
PDE6C-201ENST00000371447 CNTN3Q9P232 1028 aa12.15□□□□□ -0.46
PDE6C-201ENST00000371447 ABT1Q9ULW3 272 aaKnown RBP12.15□□□□□ -0.46
PDE6C-201ENST00000371447 SBF1O95248 1867 aa12.15□□□□□ -0.47
PDE6C-201ENST00000371447 RNF103O00237 685 aa12.14□□□□□ -0.47
PDE6C-201ENST00000371447 KRT16P08779 473 aa12.14□□□□□ -0.47
PDE6C-201ENST00000371447 VAV1P15498 845 aa12.14□□□□□ -0.47
PDE6C-201ENST00000371447 PTPN7P35236 360 aa12.14□□□□□ -0.47
PDE6C-201ENST00000371447 KCNJ11Q14654 390 aa12.14□□□□□ -0.47
PDE6C-201ENST00000371447 SNCBQ16143 134 aa12.14□□□□□ -0.47
PDE6C-201ENST00000371447 GDF6Q6KF10 455 aaPredicted RBP12.14□□□□□ -0.47
PDE6C-201ENST00000371447 UNC5AQ6ZN44 842 aa12.14□□□□□ -0.47
PDE6C-201ENST00000371447 NDUFAF2Q8N183 169 aa12.14□□□□□ -0.47
PDE6C-201ENST00000371447 PPP1R14CQ8TAE6 165 aa12.14□□□□□ -0.47
PDE6C-201ENST00000371447 KCNV2Q8TDN2 545 aa12.14□□□□□ -0.47
PDE6C-201ENST00000371447 PCED1BQ96HM7 432 aa12.14□□□□□ -0.47
PDE6C-201ENST00000371447 UNKQ9C0B0 810 aaKnown RBP12.14□□□□□ -0.47
PDE6C-201ENST00000371447 FBXO6Q9NRD1 293 aaPredicted RBP12.14□□□□□ -0.47
PDE6C-201ENST00000371447 MTMR10Q9NXD2 777 aa12.14□□□□□ -0.47
PDE6C-201ENST00000371447 ARMCX1Q9P291 453 aa12.14□□□□□ -0.47
PDE6C-201ENST00000371447 IQANK1A0A1B0GTG1 560 aa12.14□□□□□ -0.47
PDE6C-201ENST00000371447 H0Y3Z8 333 aa12.14□□□□□ -0.47
PDE6C-201ENST00000371447 XPOTO43592 962 aaKnown RBP12.14□□□□□ -0.47
PDE6C-201ENST00000371447 TCEA3O75764 348 aa12.14□□□□□ -0.47
PDE6C-201ENST00000371447 FAM200BP0CF97 657 aa12.14□□□□□ -0.47
PDE6C-201ENST00000371447 ELNP15502 786 aa12.14□□□□□ -0.47
PDE6C-201ENST00000371447 ARPP19P56211 112 aa12.14□□□□□ -0.47
PDE6C-201ENST00000371447 NCALDP61601 193 aa12.14□□□□□ -0.47
PDE6C-201ENST00000371447 ELF3P78545 371 aaPredicted RBP12.14□□□□□ -0.47
PDE6C-201ENST00000371447 STILQ15468 1287 aa12.14□□□□□ -0.47
PDE6C-201ENST00000371447 EML3Q32P44 896 aa12.14□□□□□ -0.47
PDE6C-201ENST00000371447 GPR152Q8TDT2 470 aa12.14□□□□□ -0.47
PDE6C-201ENST00000371447 RNF139Q8WU17 664 aa12.14□□□□□ -0.47
PDE6C-201ENST00000371447 TFB1MQ8WVM0 346 aaKnown RBP12.14□□□□□ -0.47
PDE6C-201ENST00000371447 HTR3CQ8WXA8 447 aa12.14□□□□□ -0.47
PDE6C-201ENST00000371447 TMEM209Q96SK2 561 aa12.14□□□□□ -0.47
PDE6C-201ENST00000371447 ANLNQ9NQW6 1124 aa12.14□□□□□ -0.47
PDE6C-201ENST00000371447 PCDH10Q9P2E7 1040 aa12.14□□□□□ -0.47
PDE6C-201ENST00000371447 SLC24A2Q9UI40 661 aa12.14□□□□□ -0.47
PDE6C-201ENST00000371447 SMG5Q9UPR3 1016 aaKnown RBP12.14□□□□□ -0.47
PDE6C-201ENST00000371447 EFR3BQ9Y2G0 817 aa12.14□□□□□ -0.47
PDE6C-201ENST00000371447 SH3BP1Q9Y3L3 701 aa12.14□□□□□ -0.47
PDE6C-201ENST00000371447 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.14□□□□□ -0.47
PDE6C-201ENST00000371447 SRRM3A6NNA2 597 aaPredicted RBP12.14□□□□□ -0.47
PDE6C-201ENST00000371447 EEF2KO00418 725 aaKnown RBP12.14□□□□□ -0.47
PDE6C-201ENST00000371447 ERVK-10P10266 1014 aa12.14□□□□□ -0.47
PDE6C-201ENST00000371447 NPR3P17342 541 aa12.14□□□□□ -0.47
PDE6C-201ENST00000371447 SNX16P57768 344 aa12.14□□□□□ -0.47
PDE6C-201ENST00000371447 ACAP1Q15027 740 aa12.14□□□□□ -0.47
PDE6C-201ENST00000371447 ANKRD20A2Q5SQ80 823 aa12.14□□□□□ -0.47
PDE6C-201ENST00000371447 ANKRD20A1Q5TYW2 823 aa12.14□□□□□ -0.47
PDE6C-201ENST00000371447 ANKRD20A3Q5VUR7 823 aa12.14□□□□□ -0.47
PDE6C-201ENST00000371447 NCBP2-AS2Q69YL0 99 aa12.14□□□□□ -0.47
PDE6C-201ENST00000371447 CLEC20AQ6ZU45 233 aa12.14□□□□□ -0.47
PDE6C-201ENST00000371447 SCN4BQ8IWT1 228 aa12.14□□□□□ -0.47
PDE6C-201ENST00000371447 SCAMP5Q8TAC9 235 aa12.14□□□□□ -0.47
PDE6C-201ENST00000371447 PRR11Q96HE9 360 aaPredicted RBP12.14□□□□□ -0.47
PDE6C-201ENST00000371447 SYT15Q9BQS2 421 aa12.14□□□□□ -0.47
PDE6C-201ENST00000371447 MANSC1Q9H8J5 431 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms