RNA–Protein interactions for RNA: ENST00000371319.7

SSBP3-203, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP3, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-203ENST00000371319 MFHAS1Q9Y4C4 1052 aa18.18■□□□□ 0.5
SSBP3-203ENST00000371319 PTPRSQ13332 1948 aa18.18■□□□□ 0.5
SSBP3-203ENST00000371319 GREB1Q4ZG55 1949 aa18.18■□□□□ 0.5
SSBP3-203ENST00000371319 H3BRJ5 948 aa18.17■□□□□ 0.5
SSBP3-203ENST00000371319 H7C0C1 242 aa18.17■□□□□ 0.5
SSBP3-203ENST00000371319 RNF40O75150 1001 aa18.17■□□□□ 0.5
SSBP3-203ENST00000371319 CPB1P15086 417 aa18.17■□□□□ 0.5
SSBP3-203ENST00000371319 ATP5OP48047 213 aa18.17■□□□□ 0.5
SSBP3-203ENST00000371319 ALDH7A1P49419 539 aaKnown RBP18.17■□□□□ 0.5
SSBP3-203ENST00000371319 GBE1Q04446 702 aa18.17■□□□□ 0.5
SSBP3-203ENST00000371319 SLC10A2Q12908 348 aaPredicted RBP18.17■□□□□ 0.5
SSBP3-203ENST00000371319 SEMA3BQ13214 749 aa18.17■□□□□ 0.5
SSBP3-203ENST00000371319 DPYSQ14117 519 aa18.17■□□□□ 0.5
SSBP3-203ENST00000371319 RNASEH2BQ5TBB1 312 aaKnown RBP18.17■□□□□ 0.5
SSBP3-203ENST00000371319 NECAB2Q7Z6G3 386 aa18.17■□□□□ 0.5
SSBP3-203ENST00000371319 TMCO2Q7Z6W1 182 aaPredicted RBP18.17■□□□□ 0.5
SSBP3-203ENST00000371319 OR2W6PQ8NHA6 318 aa18.17■□□□□ 0.5
SSBP3-203ENST00000371319 IGSF21Q96ID5 467 aa18.17■□□□□ 0.5
SSBP3-203ENST00000371319 PWWP2AQ96N64 755 aa18.17■□□□□ 0.5
SSBP3-203ENST00000371319 CRISPLD1Q9H336 500 aa18.17■□□□□ 0.5
SSBP3-203ENST00000371319 PABPC3Q9H361 631 aaKnown RBP18.17■□□□□ 0.5
SSBP3-203ENST00000371319 SEMA4AQ9H3S1 761 aa18.17■□□□□ 0.5
SSBP3-203ENST00000371319 PRDM16Q9HAZ2 1276 aa18.17■□□□□ 0.5
SSBP3-203ENST00000371319 USP29Q9HBJ7 922 aa18.17■□□□□ 0.5
SSBP3-203ENST00000371319 ARHGEF4Q9NR80 690 aa18.17■□□□□ 0.5
SSBP3-203ENST00000371319 ABCC13Q9NSE7 274 aa18.17■□□□□ 0.5
SSBP3-203ENST00000371319 HEY1Q9Y5J3 304 aa18.17■□□□□ 0.5
SSBP3-203ENST00000371319 A0A1W2PQH9 124 aa18.17■□□□□ 0.5
SSBP3-203ENST00000371319 BCLAF3A2AJT9 711 aaKnown RBP18.17■□□□□ 0.5
SSBP3-203ENST00000371319 HAPLN1P10915 354 aaPredicted RBP18.17■□□□□ 0.5
SSBP3-203ENST00000371319 USP46P62068 366 aa18.17■□□□□ 0.5
SSBP3-203ENST00000371319 SMARCB1Q12824 385 aa18.17■□□□□ 0.5
SSBP3-203ENST00000371319 BTBD8Q5XKL5 378 aa18.17■□□□□ 0.5
SSBP3-203ENST00000371319 SPPL2BQ8TCT7 592 aa18.17■□□□□ 0.5
SSBP3-203ENST00000371319 ARL8AQ96BM9 186 aa18.17■□□□□ 0.5
SSBP3-203ENST00000371319 RTP4Q96DX8 246 aa18.17■□□□□ 0.5
SSBP3-203ENST00000371319 PCDH10Q9P2E7 1040 aa18.17■□□□□ 0.5
SSBP3-203ENST00000371319 MTRRQ9UBK8 725 aa18.17■□□□□ 0.5
SSBP3-203ENST00000371319 GOLGA8KD6RF30 607 aa18.16■□□□□ 0.5
SSBP3-203ENST00000371319 FAM72CH0Y354 149 aa18.16■□□□□ 0.5
SSBP3-203ENST00000371319 EEF2KO00418 725 aaKnown RBP18.16■□□□□ 0.5
SSBP3-203ENST00000371319 ADAM12O43184 909 aa18.16■□□□□ 0.5
SSBP3-203ENST00000371319 SOAT2O75908 522 aa18.16■□□□□ 0.5
SSBP3-203ENST00000371319 MAP3K6O95382 1288 aa18.16■□□□□ 0.5
SSBP3-203ENST00000371319 STIP1P31948 543 aaKnown RBP18.16■□□□□ 0.5
SSBP3-203ENST00000371319 NR2C2P49116 596 aa18.16■□□□□ 0.5
SSBP3-203ENST00000371319 WDR5P61964 334 aaKnown RBP18.16■□□□□ 0.5
SSBP3-203ENST00000371319 ZNF844Q08AG5 666 aa18.16■□□□□ 0.5
SSBP3-203ENST00000371319 XRCC4Q13426 336 aa18.16■□□□□ 0.5
SSBP3-203ENST00000371319 TTMPQ5BVD1 217 aa18.16■□□□□ 0.5
SSBP3-203ENST00000371319 FAM72AQ5TYM5 149 aa18.16■□□□□ 0.5
SSBP3-203ENST00000371319 FAM72DQ6L9T8 149 aa18.16■□□□□ 0.5
SSBP3-203ENST00000371319 MFSD5Q6N075 450 aa18.16■□□□□ 0.5
SSBP3-203ENST00000371319 CCDC25Q86WR0 208 aa18.16■□□□□ 0.5
SSBP3-203ENST00000371319 FAM72BQ86X60 149 aa18.16■□□□□ 0.5
SSBP3-203ENST00000371319 ZCCHC9Q8N567 271 aaKnown RBP18.16■□□□□ 0.5
SSBP3-203ENST00000371319 C2orf15Q8WU43 125 aaKnown RBP18.16■□□□□ 0.5
SSBP3-203ENST00000371319 FOXP3Q9BZS1 431 aa18.16■□□□□ 0.5
SSBP3-203ENST00000371319 SMOC2Q9H3U7 446 aa18.16■□□□□ 0.5
SSBP3-203ENST00000371319 FBXO44Q9H4M3 255 aa18.16■□□□□ 0.5
SSBP3-203ENST00000371319 OSER1Q9NX31 292 aa18.16■□□□□ 0.5
SSBP3-203ENST00000371319 FARP1Q9Y4F1 1045 aaPredicted RBP18.16■□□□□ 0.5
SSBP3-203ENST00000371319 KIAA1671Q9BY89 1806 aa18.15■□□□□ 0.5
SSBP3-203ENST00000371319 CFAP69A5D8W1 941 aa18.15■□□□□ 0.5
SSBP3-203ENST00000371319 DCLK1O15075 740 aa18.15■□□□□ 0.5
SSBP3-203ENST00000371319 IRAK2O43187 625 aa18.15■□□□□ 0.5
SSBP3-203ENST00000371319 CREB3O43889 395 aa18.15■□□□□ 0.5
SSBP3-203ENST00000371319 NUDT17P0C025 328 aa18.15■□□□□ 0.5
SSBP3-203ENST00000371319 RAG1P15918 1043 aa18.15■□□□□ 0.5
SSBP3-203ENST00000371319 RBL1P28749 1068 aa18.15■□□□□ 0.5
SSBP3-203ENST00000371319 NRLP54845 237 aa18.15■□□□□ 0.5
SSBP3-203ENST00000371319 MORF4L2Q15014 288 aa18.15■□□□□ 0.5
SSBP3-203ENST00000371319 USP41Q3LFD5 358 aa18.15■□□□□ 0.5
SSBP3-203ENST00000371319 CEP85LQ5SZL2 805 aa18.15■□□□□ 0.5
SSBP3-203ENST00000371319 KCNT2Q6UVM3 1135 aa18.15■□□□□ 0.5
SSBP3-203ENST00000371319 RFX8Q6ZV50 586 aa18.15■□□□□ 0.5
SSBP3-203ENST00000371319 TRMT10CQ7L0Y3 403 aaKnown RBP18.15■□□□□ 0.5
SSBP3-203ENST00000371319 CDKL3Q8IVW4 592 aaPredicted RBP18.15■□□□□ 0.5
SSBP3-203ENST00000371319 PRCCQ92733 491 aaPredicted RBP18.15■□□□□ 0.5
SSBP3-203ENST00000371319 CASP10Q92851 521 aa18.15■□□□□ 0.5
SSBP3-203ENST00000371319 OLFM3Q96PB7 478 aa18.15■□□□□ 0.5
SSBP3-203ENST00000371319 QKIQ96PU8 341 aaKnown RBP eCLIP18.15■□□□□ 0.5
SSBP3-203ENST00000371319 TKTL2Q9H0I9 626 aa18.15■□□□□ 0.5
SSBP3-203ENST00000371319 TSPYL1Q9H0U9 437 aa18.15■□□□□ 0.5
SSBP3-203ENST00000371319 CDC42EP4Q9H3Q1 356 aaKnown RBP18.15■□□□□ 0.5
SSBP3-203ENST00000371319 WDCPQ9H6R7 721 aa18.15■□□□□ 0.5
SSBP3-203ENST00000371319 ARHGEF38Q9NXL2 777 aa18.15■□□□□ 0.5
SSBP3-203ENST00000371319 DTLQ9NZJ0 730 aa18.15■□□□□ 0.5
SSBP3-203ENST00000371319 VPS18Q9P253 973 aa18.15■□□□□ 0.5
SSBP3-203ENST00000371319 SLC27A5Q9Y2P5 690 aa18.15■□□□□ 0.5
SSBP3-203ENST00000371319 SNX10Q9Y5X0 201 aa18.15■□□□□ 0.5
SSBP3-203ENST00000371319 BACE2Q9Y5Z0 518 aa18.15■□□□□ 0.5
SSBP3-203ENST00000371319 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.14■□□□□ 0.49
SSBP3-203ENST00000371319 FAM92AA1XBS5 289 aa18.14■□□□□ 0.49
SSBP3-203ENST00000371319 NDC80O14777 642 aa18.14■□□□□ 0.49
SSBP3-203ENST00000371319 RIPK2O43353 540 aa18.14■□□□□ 0.49
SSBP3-203ENST00000371319 MFSD11O43934 449 aa18.14■□□□□ 0.49
SSBP3-203ENST00000371319 ACRP10323 421 aa18.14■□□□□ 0.49
SSBP3-203ENST00000371319 HCAR3P49019 387 aa18.14■□□□□ 0.49
SSBP3-203ENST00000371319 CTCFP49711 727 aaPredicted RBP18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms