RNA–Protein interactions for RNA: ENST00000371248.3

VPS37B-202, Transcript of VPS37B, ESCRT-I subunit, humanhuman

TSL 3

Gene VPS37B, Length 2,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37B-202ENST00000371248 GKN1Q9NS71 199 aa18.34■□□□□ 0.53
VPS37B-202ENST00000371248 SMPD4Q9NXE4 827 aa18.34■□□□□ 0.53
VPS37B-202ENST00000371248 ZMYM5Q9UJ78 669 aa18.34■□□□□ 0.53
VPS37B-202ENST00000371248 COMTP21964 271 aa18.34■□□□□ 0.53
VPS37B-202ENST00000371248 SSR1P43307 286 aaKnown RBP18.34■□□□□ 0.53
VPS37B-202ENST00000371248 TBX4P57082 545 aa18.34■□□□□ 0.53
VPS37B-202ENST00000371248 EIF4EBP2Q13542 120 aaPredicted RBP18.34■□□□□ 0.53
VPS37B-202ENST00000371248 SND1Q7KZF4 910 aaKnown RBP eCLIP18.34■□□□□ 0.53
VPS37B-202ENST00000371248 NPAS3Q8IXF0 933 aa18.34■□□□□ 0.53
VPS37B-202ENST00000371248 LRRC57Q8N9N7 239 aa18.34■□□□□ 0.53
VPS37B-202ENST00000371248 SUSD6Q92537 303 aa18.34■□□□□ 0.53
VPS37B-202ENST00000371248 RNF34Q969K3 372 aa18.34■□□□□ 0.53
VPS37B-202ENST00000371248 NECTIN4Q96NY8 510 aa18.34■□□□□ 0.53
VPS37B-202ENST00000371248 KLF16Q9BXK1 252 aaPredicted RBP18.34■□□□□ 0.53
VPS37B-202ENST00000371248 SMG9Q9H0W8 520 aaKnown RBP18.34■□□□□ 0.53
VPS37B-202ENST00000371248 TLR6Q9Y2C9 796 aa18.34■□□□□ 0.53
VPS37B-202ENST00000371248 CPQQ9Y646 472 aa18.34■□□□□ 0.53
VPS37B-202ENST00000371248 NUP210Q8TEM1 1887 aaPredicted RBP18.33■□□□□ 0.53
VPS37B-202ENST00000371248 GRXCR2A6NFK2 248 aa18.33■□□□□ 0.52
VPS37B-202ENST00000371248 MAN1A1P33908 653 aa18.33■□□□□ 0.52
VPS37B-202ENST00000371248 SLC1A1P43005 524 aa18.33■□□□□ 0.52
VPS37B-202ENST00000371248 SLC7A9P82251 487 aa18.33■□□□□ 0.52
VPS37B-202ENST00000371248 TRIP4Q15650 581 aaPredicted RBP18.33■□□□□ 0.52
VPS37B-202ENST00000371248 FAM131BQ86XD5 332 aa18.33■□□□□ 0.52
VPS37B-202ENST00000371248 SYCE1Q8N0S2 351 aa18.33■□□□□ 0.52
VPS37B-202ENST00000371248 ALS2CR12Q96Q35 445 aa18.33■□□□□ 0.52
VPS37B-202ENST00000371248 PCSK1NQ9UHG2 260 aa18.33■□□□□ 0.52
VPS37B-202ENST00000371248 SPOPO43791 374 aa18.32■□□□□ 0.52
VPS37B-202ENST00000371248 TCF4P15884 667 aa18.32■□□□□ 0.52
VPS37B-202ENST00000371248 MIPP30301 263 aa18.32■□□□□ 0.52
VPS37B-202ENST00000371248 COG7P83436 770 aa18.32■□□□□ 0.52
VPS37B-202ENST00000371248 ZC3H12AQ5D1E8 599 aaKnown RBP18.32■□□□□ 0.52
VPS37B-202ENST00000371248 TTC16Q8NEE8 873 aa18.32■□□□□ 0.52
VPS37B-202ENST00000371248 TRIM58Q8NG06 486 aa18.32■□□□□ 0.52
VPS37B-202ENST00000371248 MAFAQ8NHW3 353 aaPredicted RBP18.32■□□□□ 0.52
VPS37B-202ENST00000371248 WDCPQ9H6R7 721 aa18.32■□□□□ 0.52
VPS37B-202ENST00000371248 HBS1LQ9Y450 684 aaKnown RBP18.32■□□□□ 0.52
VPS37B-202ENST00000371248 MBTPS2O43462 519 aa18.32■□□□□ 0.52
VPS37B-202ENST00000371248 KIF5CO60282 957 aa18.32■□□□□ 0.52
VPS37B-202ENST00000371248 IRF1P10914 325 aa18.32■□□□□ 0.52
VPS37B-202ENST00000371248 PCK1P35558 622 aa18.32■□□□□ 0.52
VPS37B-202ENST00000371248 CXCR3P49682 368 aa18.32■□□□□ 0.52
VPS37B-202ENST00000371248 KCNQ1P51787 676 aa18.32■□□□□ 0.52
VPS37B-202ENST00000371248 KPNA1P52294 538 aaPredicted RBP18.32■□□□□ 0.52
VPS37B-202ENST00000371248 ZXDBP98169 803 aa18.32■□□□□ 0.52
VPS37B-202ENST00000371248 NNTQ13423 1086 aa18.32■□□□□ 0.52
VPS37B-202ENST00000371248 SMAD4Q13485 552 aaKnown RBP18.32■□□□□ 0.52
VPS37B-202ENST00000371248 ZNF569Q5MCW4 686 aa18.32■□□□□ 0.52
VPS37B-202ENST00000371248 SLFN11Q7Z7L1 901 aa18.32■□□□□ 0.52
VPS37B-202ENST00000371248 ARID3BQ8IVW6 561 aaPredicted RBP18.32■□□□□ 0.52
VPS37B-202ENST00000371248 ZSCAN18Q8TBC5 510 aaPredicted RBP18.32■□□□□ 0.52
VPS37B-202ENST00000371248 SLC39A13Q96H72 371 aa18.32■□□□□ 0.52
VPS37B-202ENST00000371248 ZFRQ96KR1 1074 aaKnown RBP18.32■□□□□ 0.52
VPS37B-202ENST00000371248 NCAPGQ9BPX3 1015 aa18.32■□□□□ 0.52
VPS37B-202ENST00000371248 GDE1Q9NZC3 331 aa18.32■□□□□ 0.52
VPS37B-202ENST00000371248 CDH7Q9ULB5 785 aa18.32■□□□□ 0.52
VPS37B-202ENST00000371248 FTCDO95954 541 aa18.31■□□□□ 0.52
VPS37B-202ENST00000371248 TNNT1P13805 278 aa18.31■□□□□ 0.52
VPS37B-202ENST00000371248 CCR1P32246 355 aa18.31■□□□□ 0.52
VPS37B-202ENST00000371248 GBP2P32456 591 aaPredicted RBP18.31■□□□□ 0.52
VPS37B-202ENST00000371248 TAS2R40P59535 323 aa18.31■□□□□ 0.52
VPS37B-202ENST00000371248 FCRL2Q96LA5 508 aaPredicted RBP18.31■□□□□ 0.52
VPS37B-202ENST00000371248 MYADMQ96S97 322 aa18.31■□□□□ 0.52
VPS37B-202ENST00000371248 TDP1Q9NUW8 608 aa18.31■□□□□ 0.52
VPS37B-202ENST00000371248 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.31■□□□□ 0.52
VPS37B-202ENST00000371248 USP18Q9UMW8 372 aa18.31■□□□□ 0.52
VPS37B-202ENST00000371248 CCL26Q9Y258 94 aa18.31■□□□□ 0.52
VPS37B-202ENST00000371248 PRPSAP2O60256 369 aa18.3■□□□□ 0.52
VPS37B-202ENST00000371248 PEX26Q7Z412 305 aa18.3■□□□□ 0.52
VPS37B-202ENST00000371248 USP13Q92995 863 aaPredicted RBP18.3■□□□□ 0.52
VPS37B-202ENST00000371248 TKTL2Q9H0I9 626 aa18.3■□□□□ 0.52
VPS37B-202ENST00000371248 AMFRQ9UKV5 643 aa18.3■□□□□ 0.52
VPS37B-202ENST00000371248 ARHGAP26Q9UNA1 814 aa18.3■□□□□ 0.52
VPS37B-202ENST00000371248 STC2O76061 302 aa18.3■□□□□ 0.52
VPS37B-202ENST00000371248 PRAMEF12O95522 483 aa18.3■□□□□ 0.52
VPS37B-202ENST00000371248 IGLV3-27P01718 113 aa18.3■□□□□ 0.52
VPS37B-202ENST00000371248 RING1Q06587 406 aa18.3■□□□□ 0.52
VPS37B-202ENST00000371248 PPP2R5DQ14738 602 aa18.3■□□□□ 0.52
VPS37B-202ENST00000371248 HADHQ16836 314 aaKnown RBP18.3■□□□□ 0.52
VPS37B-202ENST00000371248 FAM78AQ5JUQ0 283 aa18.3■□□□□ 0.52
VPS37B-202ENST00000371248 NT5DC3Q86UY8 548 aa18.3■□□□□ 0.52
VPS37B-202ENST00000371248 SLC35F6Q8N357 371 aa18.3■□□□□ 0.52
VPS37B-202ENST00000371248 CCDC185Q8N715 623 aa18.3■□□□□ 0.52
VPS37B-202ENST00000371248 ADAMTS19Q8TE59 1207 aa18.3■□□□□ 0.52
VPS37B-202ENST00000371248 WBP2Q969T9 261 aa18.3■□□□□ 0.52
VPS37B-202ENST00000371248 PLD4Q96BZ4 506 aa18.3■□□□□ 0.52
VPS37B-202ENST00000371248 PEBP4Q96S96 227 aa18.3■□□□□ 0.52
VPS37B-202ENST00000371248 ZWILCHQ9H900 591 aa18.3■□□□□ 0.52
VPS37B-202ENST00000371248 TMPRSS4Q9NRS4 437 aa18.3■□□□□ 0.52
VPS37B-202ENST00000371248 VGLL3A8MV65 326 aa18.29■□□□□ 0.52
VPS37B-202ENST00000371248 MOCS2O96007 188 aaPredicted RBP18.29■□□□□ 0.52
VPS37B-202ENST00000371248 APOEP02649 317 aa18.29■□□□□ 0.52
VPS37B-202ENST00000371248 SLC2A3P11169 496 aa18.29■□□□□ 0.52
VPS37B-202ENST00000371248 IL1R2P27930 398 aa18.29■□□□□ 0.52
VPS37B-202ENST00000371248 GJC1P36383 396 aa18.29■□□□□ 0.52
VPS37B-202ENST00000371248 SLC25A11Q02978 314 aaKnown RBP18.29■□□□□ 0.52
VPS37B-202ENST00000371248 BRMS1LQ5PSV4 323 aa18.29■□□□□ 0.52
VPS37B-202ENST00000371248 TXNRD3NBQ6F5E7 133 aa18.29■□□□□ 0.52
VPS37B-202ENST00000371248 ASB16Q96NS5 453 aa18.29■□□□□ 0.52
VPS37B-202ENST00000371248 ANLNQ9NQW6 1124 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms