RNA–Protein interactions for RNA: ENST00000370361.5

VMA21-202, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 5 BASIC

Gene VMA21, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-202ENST00000370361 PILRBQ9UKJ0 227 aa16.89■□□□□ 0.29
VMA21-202ENST00000370361 NFE2L3Q9Y4A8 694 aa16.89■□□□□ 0.29
VMA21-202ENST00000370361 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.88■□□□□ 0.29
VMA21-202ENST00000370361 SLC12A8A0AV02 714 aa16.88■□□□□ 0.29
VMA21-202ENST00000370361 ANTXRLA6NF34 631 aa16.88■□□□□ 0.29
VMA21-202ENST00000370361 FGFR1OPO95684 399 aaKnown RBP16.88■□□□□ 0.29
VMA21-202ENST00000370361 CEACAM1P13688 526 aa16.88■□□□□ 0.29
VMA21-202ENST00000370361 GCNT1Q02742 428 aa16.88■□□□□ 0.29
VMA21-202ENST00000370361 ENPP2Q13822 863 aa16.88■□□□□ 0.29
VMA21-202ENST00000370361 CCDC40Q4G0X9 1142 aa16.88■□□□□ 0.29
VMA21-202ENST00000370361 MPPE1Q53F39 396 aa16.88■□□□□ 0.29
VMA21-202ENST00000370361 SYCP2LQ5T4T6 812 aa16.88■□□□□ 0.29
VMA21-202ENST00000370361 TOGARAM2Q6ZUX3 1019 aa16.88■□□□□ 0.29
VMA21-202ENST00000370361 DENND1CQ8IV53 801 aa16.88■□□□□ 0.29
VMA21-202ENST00000370361 TMEFF1Q8IYR6 380 aa16.88■□□□□ 0.29
VMA21-202ENST00000370361 GOLGA1Q92805 767 aa16.88■□□□□ 0.29
VMA21-202ENST00000370361 HSFY1Q96LI6 401 aa16.88■□□□□ 0.29
VMA21-202ENST00000370361 CNTNAP3BQ96NU0 1288 aa16.88■□□□□ 0.29
VMA21-202ENST00000370361 TRIM62Q9BVG3 475 aa16.88■□□□□ 0.29
VMA21-202ENST00000370361 CNTNAP3Q9BZ76 1288 aa16.88■□□□□ 0.29
VMA21-202ENST00000370361 THAP10Q9P2Z0 257 aaPredicted RBP16.88■□□□□ 0.29
VMA21-202ENST00000370361 STOML2Q9UJZ1 356 aa16.88■□□□□ 0.29
VMA21-202ENST00000370361 HCN2Q9UL51 889 aa16.88■□□□□ 0.29
VMA21-202ENST00000370361 IGHV1OR15-9A0A0B4J2B8 117 aa16.87■□□□□ 0.29
VMA21-202ENST00000370361 TRIM49BA6NDI0 452 aa16.87■□□□□ 0.29
VMA21-202ENST00000370361 UPK3BL1B0FP48 263 aa16.87■□□□□ 0.29
VMA21-202ENST00000370361 UPK3BL2E5RIL1 263 aa16.87■□□□□ 0.29
VMA21-202ENST00000370361 TRIM24O15164 1050 aa16.87■□□□□ 0.29
VMA21-202ENST00000370361 SART1O43290 800 aaKnown RBP16.87■□□□□ 0.29
VMA21-202ENST00000370361 SYNCRIPO60506 623 aaKnown RBP16.87■□□□□ 0.29
VMA21-202ENST00000370361 FBXO21O94952 628 aa16.87■□□□□ 0.29
VMA21-202ENST00000370361 NDUFV2P19404 249 aa16.87■□□□□ 0.29
VMA21-202ENST00000370361 KCNA4P22459 653 aa16.87■□□□□ 0.29
VMA21-202ENST00000370361 PTGER3P43115 390 aa16.87■□□□□ 0.29
VMA21-202ENST00000370361 IRX4P78413 519 aa16.87■□□□□ 0.29
VMA21-202ENST00000370361 ADIGQ0VDE8 80 aa16.87■□□□□ 0.29
VMA21-202ENST00000370361 CNGA2Q16280 664 aa16.87■□□□□ 0.29
VMA21-202ENST00000370361 MEA1Q16626 185 aa16.87■□□□□ 0.29
VMA21-202ENST00000370361 PKDCCQ504Y2 493 aa16.87■□□□□ 0.29
VMA21-202ENST00000370361 BSPRYQ5W0U4 402 aa16.87■□□□□ 0.29
VMA21-202ENST00000370361 MSANTD2Q6P1R3 559 aa16.87■□□□□ 0.29
VMA21-202ENST00000370361 TMEM270Q6UE05 265 aa16.87■□□□□ 0.29
VMA21-202ENST00000370361 FMNL3Q8IVF7 1028 aa16.87■□□□□ 0.29
VMA21-202ENST00000370361 UNC45BQ8IWX7 931 aa16.87■□□□□ 0.29
VMA21-202ENST00000370361 WFIKKN2Q8TEU8 576 aa16.87■□□□□ 0.29
VMA21-202ENST00000370361 MRGPRX1Q96LB2 322 aa16.87■□□□□ 0.29
VMA21-202ENST00000370361 FAM81BQ96LP2 452 aa16.87■□□□□ 0.29
VMA21-202ENST00000370361 ZDHHC4Q9NPG8 344 aa16.87■□□□□ 0.29
VMA21-202ENST00000370361 MAN1B1Q9UKM7 699 aa16.87■□□□□ 0.29
VMA21-202ENST00000370361 SLC6A14Q9UN76 642 aa16.87■□□□□ 0.29
VMA21-202ENST00000370361 STON1Q9Y6Q2 735 aa16.87■□□□□ 0.29
VMA21-202ENST00000370361 LAMA1P25391 3075 aa16.86■□□□□ 0.29
VMA21-202ENST00000370361 CDX4O14627 284 aaPredicted RBP16.86■□□□□ 0.29
VMA21-202ENST00000370361 IRAK2O43187 625 aa16.86■□□□□ 0.29
VMA21-202ENST00000370361 NDUFS2O75306 463 aa16.86■□□□□ 0.29
VMA21-202ENST00000370361 SYPP08247 313 aa16.86■□□□□ 0.29
VMA21-202ENST00000370361 HMBSP08397 361 aa16.86■□□□□ 0.29
VMA21-202ENST00000370361 SERPINF2P08697 491 aa16.86■□□□□ 0.29
VMA21-202ENST00000370361 OXTRP30559 389 aa16.86■□□□□ 0.29
VMA21-202ENST00000370361 NOVA1P51513 510 aaKnown RBP16.86■□□□□ 0.29
VMA21-202ENST00000370361 ATXN3P54252 364 aaPredicted RBP16.86■□□□□ 0.29
VMA21-202ENST00000370361 MARSP56192 900 aaKnown RBP16.86■□□□□ 0.29
VMA21-202ENST00000370361 ARID5AQ03989 594 aa16.86■□□□□ 0.29
VMA21-202ENST00000370361 GFPT1Q06210 699 aaPredicted RBP16.86■□□□□ 0.29
VMA21-202ENST00000370361 ZNF33AQ06730 810 aa16.86■□□□□ 0.29
VMA21-202ENST00000370361 MPP7Q5T2T1 576 aa16.86■□□□□ 0.29
VMA21-202ENST00000370361 ADGRF1Q5T601 910 aa16.86■□□□□ 0.29
VMA21-202ENST00000370361 N4BP2L1Q5TBK1 243 aaPredicted RBP16.86■□□□□ 0.29
VMA21-202ENST00000370361 NUGGCQ68CJ6 796 aa16.86■□□□□ 0.29
VMA21-202ENST00000370361 PSAPL1Q6NUJ1 521 aa16.86■□□□□ 0.29
VMA21-202ENST00000370361 TTI2Q6NXR4 508 aa16.86■□□□□ 0.29
VMA21-202ENST00000370361 BHLHA9Q7RTU4 235 aa16.86■□□□□ 0.29
VMA21-202ENST00000370361 PPM1KQ8N3J5 372 aa16.86■□□□□ 0.29
VMA21-202ENST00000370361 TRIML1Q8N9V2 468 aa16.86■□□□□ 0.29
VMA21-202ENST00000370361 DDI1Q8WTU0 396 aa16.86■□□□□ 0.29
VMA21-202ENST00000370361 SLC35F5Q8WV83 523 aa16.86■□□□□ 0.29
VMA21-202ENST00000370361 BHMTQ93088 406 aa16.86■□□□□ 0.29
VMA21-202ENST00000370361 PIWIL1Q96J94 861 aaKnown RBP16.86■□□□□ 0.29
VMA21-202ENST00000370361 SLC32A1Q9H598 525 aa16.86■□□□□ 0.29
VMA21-202ENST00000370361 FBRSQ9HAH7 460 aa16.86■□□□□ 0.29
VMA21-202ENST00000370361 ELOVL2Q9NXB9 296 aa16.86■□□□□ 0.29
VMA21-202ENST00000370361 CACNA2D2Q9NY47 1150 aa16.86■□□□□ 0.29
VMA21-202ENST00000370361 PLK2Q9NYY3 685 aa16.86■□□□□ 0.29
VMA21-202ENST00000370361 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.86■□□□□ 0.29
VMA21-202ENST00000370361 PCDHB4Q9Y5E5 795 aa16.86■□□□□ 0.29
VMA21-202ENST00000370361 GNSP15586 552 aa16.85■□□□□ 0.29
VMA21-202ENST00000370361 ENGP17813 658 aa16.85■□□□□ 0.29
VMA21-202ENST00000370361 WASP42768 502 aa16.85■□□□□ 0.29
VMA21-202ENST00000370361 DAOAP59103 153 aa16.85■□□□□ 0.29
VMA21-202ENST00000370361 RING1Q06587 406 aa16.85■□□□□ 0.29
VMA21-202ENST00000370361 NNTQ13423 1086 aa16.85■□□□□ 0.29
VMA21-202ENST00000370361 HNRNPDQ14103 355 aaKnown RBP16.85■□□□□ 0.29
VMA21-202ENST00000370361 WDR45BQ5MNZ6 344 aa16.85■□□□□ 0.29
VMA21-202ENST00000370361 HDDC3Q8N4P3 179 aa16.85■□□□□ 0.29
VMA21-202ENST00000370361 NELFBQ8WX92 580 aa16.85■□□□□ 0.29
VMA21-202ENST00000370361 AZIN2Q96A70 460 aa16.85■□□□□ 0.29
VMA21-202ENST00000370361 ZNF419Q96HQ0 510 aaPredicted RBP16.85■□□□□ 0.29
VMA21-202ENST00000370361 ACOX2Q99424 681 aa16.85■□□□□ 0.29
VMA21-202ENST00000370361 DDX50Q9BQ39 737 aaKnown RBP16.85■□□□□ 0.29
VMA21-202ENST00000370361 PCED1AQ9H1Q7 454 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms