RNA–Protein interactions for RNA: ENST00000370228.1

TWNK-202, Transcript of twinkle mtDNA helicase, humanhuman

TSL 1 (best) BASIC

Gene TWNK, Length 3,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TWNK-202ENST00000370228 NT5C3AQ9H0P0 336 aa11.21□□□□□ -0.62
TWNK-202ENST00000370228 DDX47Q9H0S4 455 aaKnown RBP11.21□□□□□ -0.62
TWNK-202ENST00000370228 LIN28AQ9H9Z2 209 aaKnown RBP11.21□□□□□ -0.62
TWNK-202ENST00000370228 FARSBQ9NSD9 589 aaKnown RBP11.21□□□□□ -0.62
TWNK-202ENST00000370228 SRRDQ9UH36 339 aa11.21□□□□□ -0.62
TWNK-202ENST00000370228 XPO7Q9UIA9 1087 aaKnown RBP11.21□□□□□ -0.62
TWNK-202ENST00000370228 PARP14Q460N5 1801 aa11.21□□□□□ -0.62
TWNK-202ENST00000370228 DNAJC25-GNG10A0A024R161 153 aa11.2□□□□□ -0.62
TWNK-202ENST00000370228 PGRMC1O00264 195 aaKnown RBP11.2□□□□□ -0.62
TWNK-202ENST00000370228 SIN3BO75182 1162 aa11.2□□□□□ -0.62
TWNK-202ENST00000370228 GABBR2O75899 941 aa11.2□□□□□ -0.62
TWNK-202ENST00000370228 ESRRBO95718 433 aa11.2□□□□□ -0.62
TWNK-202ENST00000370228 GGPS1O95749 300 aa11.2□□□□□ -0.62
TWNK-202ENST00000370228 RRM1P23921 792 aa11.2□□□□□ -0.62
TWNK-202ENST00000370228 CCND2P30279 289 aa11.2□□□□□ -0.62
TWNK-202ENST00000370228 RPL26P61254 145 aaKnown RBP11.2□□□□□ -0.62
TWNK-202ENST00000370228 EFTUD2Q15029 972 aaKnown RBP eCLIP11.2□□□□□ -0.62
TWNK-202ENST00000370228 ZNF792Q3KQV3 632 aa11.2□□□□□ -0.62
TWNK-202ENST00000370228 SNX32Q86XE0 403 aa11.2□□□□□ -0.62
TWNK-202ENST00000370228 ELMOD2Q8IZ81 293 aa11.2□□□□□ -0.62
TWNK-202ENST00000370228 BTBD10Q9BSF8 475 aa11.2□□□□□ -0.62
TWNK-202ENST00000370228 PACSIN1Q9BY11 444 aa11.2□□□□□ -0.62
TWNK-202ENST00000370228 CCDC113Q9H0I3 377 aa11.2□□□□□ -0.62
TWNK-202ENST00000370228 STMN4Q9H169 189 aaPredicted RBP11.2□□□□□ -0.62
TWNK-202ENST00000370228 WASH6PQ9NQA3 447 aa11.2□□□□□ -0.62
TWNK-202ENST00000370228 PCDHA12Q9UN75 941 aa11.2□□□□□ -0.62
TWNK-202ENST00000370228 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.2□□□□□ -0.62
TWNK-202ENST00000370228 PSMD11O00231 422 aa11.2□□□□□ -0.62
TWNK-202ENST00000370228 EML1O00423 815 aa11.2□□□□□ -0.62
TWNK-202ENST00000370228 CCDC22O60826 627 aa11.2□□□□□ -0.62
TWNK-202ENST00000370228 GAS7O60861 476 aa11.2□□□□□ -0.62
TWNK-202ENST00000370228 RNGTTO60942 597 aaKnown RBP11.2□□□□□ -0.62
TWNK-202ENST00000370228 ZNF286BP0CG31 522 aa11.2□□□□□ -0.62
TWNK-202ENST00000370228 AMPD1P23109 780 aa11.2□□□□□ -0.62
TWNK-202ENST00000370228 PTGS2P35354 604 aa11.2□□□□□ -0.62
TWNK-202ENST00000370228 CDK9P50750 372 aaKnown RBP11.2□□□□□ -0.62
TWNK-202ENST00000370228 CACNB2Q08289 660 aaPredicted RBP11.2□□□□□ -0.62
TWNK-202ENST00000370228 SMARCB1Q12824 385 aa11.2□□□□□ -0.62
TWNK-202ENST00000370228 GRB10Q13322 594 aa11.2□□□□□ -0.62
TWNK-202ENST00000370228 CTTNQ14247 550 aaKnown RBP11.2□□□□□ -0.62
TWNK-202ENST00000370228 RGS21Q2M5E4 152 aa11.2□□□□□ -0.62
TWNK-202ENST00000370228 MORN1Q5T089 497 aa11.2□□□□□ -0.62
TWNK-202ENST00000370228 HGSNATQ68CP4 663 aa11.2□□□□□ -0.62
TWNK-202ENST00000370228 PPP1R18Q6NYC8 613 aa11.2□□□□□ -0.62
TWNK-202ENST00000370228 HELQQ8TDG4 1101 aa11.2□□□□□ -0.62
TWNK-202ENST00000370228 NXPE3Q969Y0 559 aa11.2□□□□□ -0.62
TWNK-202ENST00000370228 PPP1R16BQ96T49 567 aa11.2□□□□□ -0.62
TWNK-202ENST00000370228 GOLPH3Q9H4A6 298 aa11.2□□□□□ -0.62
TWNK-202ENST00000370228 GABBR1Q9UBS5 961 aa11.2□□□□□ -0.62
TWNK-202ENST00000370228 ZNFX1Q9P2E3 1918 aaKnown RBP11.2□□□□□ -0.62
TWNK-202ENST00000370228 IGLV3-22A0A075B6J6 115 aa11.2□□□□□ -0.62
TWNK-202ENST00000370228 hCG_1984214I3L0E3 225 aa11.2□□□□□ -0.62
TWNK-202ENST00000370228 SCO2O43819 266 aa11.2□□□□□ -0.62
TWNK-202ENST00000370228 MAP3K6O95382 1288 aa11.2□□□□□ -0.62
TWNK-202ENST00000370228 GSTM1P09488 218 aa11.2□□□□□ -0.62
TWNK-202ENST00000370228 C6orf222P0C671 652 aaPredicted RBP11.2□□□□□ -0.62
TWNK-202ENST00000370228 ATP6V1B1P15313 513 aa11.2□□□□□ -0.62
TWNK-202ENST00000370228 MAP3K7CLP57077 242 aa11.2□□□□□ -0.62
TWNK-202ENST00000370228 DNAJC3Q13217 504 aa11.2□□□□□ -0.62
TWNK-202ENST00000370228 KRT81Q14533 505 aa11.2□□□□□ -0.62
TWNK-202ENST00000370228 MMEL1Q495T6 779 aa11.2□□□□□ -0.62
TWNK-202ENST00000370228 SFT2D3Q587I9 215 aa11.2□□□□□ -0.62
TWNK-202ENST00000370228 C6orf132Q5T0Z8 1188 aa11.2□□□□□ -0.62
TWNK-202ENST00000370228 FAM122CQ6P4D5 195 aa11.2□□□□□ -0.62
TWNK-202ENST00000370228 GPR141Q7Z602 305 aa11.2□□□□□ -0.62
TWNK-202ENST00000370228 GALNT4Q8N4A0 578 aa11.2□□□□□ -0.62
TWNK-202ENST00000370228 Q8N9G6 341 aaPredicted RBP11.2□□□□□ -0.62
TWNK-202ENST00000370228 TRPV1Q8NER1 839 aa11.2□□□□□ -0.62
TWNK-202ENST00000370228 CAPSLQ8WWF8 208 aa11.2□□□□□ -0.62
TWNK-202ENST00000370228 TAMM41Q96BW9 452 aa11.2□□□□□ -0.62
TWNK-202ENST00000370228 PSD2Q9BQI7 771 aa11.2□□□□□ -0.62
TWNK-202ENST00000370228 TRIM55Q9BYV6 548 aa11.2□□□□□ -0.62
TWNK-202ENST00000370228 FOSP01100 380 aaPredicted RBP11.19□□□□□ -0.62
TWNK-202ENST00000370228 UBA1P22314 1058 aaKnown RBP11.19□□□□□ -0.62
TWNK-202ENST00000370228 NR4A1P22736 598 aa11.19□□□□□ -0.62
TWNK-202ENST00000370228 CACNB1Q02641 598 aaPredicted RBP11.19□□□□□ -0.62
TWNK-202ENST00000370228 AP3B2Q13367 1082 aa11.19□□□□□ -0.62
TWNK-202ENST00000370228 ASTE1Q2TB18 679 aaPredicted RBP11.19□□□□□ -0.62
TWNK-202ENST00000370228 FBXL19Q6PCT2 694 aa11.19□□□□□ -0.62
TWNK-202ENST00000370228 RNF19BQ6ZMZ0 732 aa11.19□□□□□ -0.62
TWNK-202ENST00000370228 SLC7A3Q8WY07 619 aa11.19□□□□□ -0.62
TWNK-202ENST00000370228 RAD54LQ92698 747 aa11.19□□□□□ -0.62
TWNK-202ENST00000370228 SYN2Q92777 582 aaPredicted RBP11.19□□□□□ -0.62
TWNK-202ENST00000370228 TBCBQ99426 244 aa11.19□□□□□ -0.62
TWNK-202ENST00000370228 MXRA8Q9BRK3 442 aa11.19□□□□□ -0.62
TWNK-202ENST00000370228 C10orf88Q9H8K7 445 aa11.19□□□□□ -0.62
TWNK-202ENST00000370228 SAR1AQ9NR31 198 aa11.19□□□□□ -0.62
TWNK-202ENST00000370228 BLOC1S4Q9NUP1 217 aa11.19□□□□□ -0.62
TWNK-202ENST00000370228 TMEM120BA0PK00 339 aa11.19□□□□□ -0.62
TWNK-202ENST00000370228 MYADML2A6NDP7 307 aa11.19□□□□□ -0.62
TWNK-202ENST00000370228 SLC15A5A6NIM6 579 aa11.19□□□□□ -0.62
TWNK-202ENST00000370228 F8W8V4 182 aa11.19□□□□□ -0.62
TWNK-202ENST00000370228 INHAP05111 366 aa11.19□□□□□ -0.62
TWNK-202ENST00000370228 CD48P09326 243 aa11.19□□□□□ -0.62
TWNK-202ENST00000370228 GNG2P59768 71 aa11.19□□□□□ -0.62
TWNK-202ENST00000370228 CETN1Q12798 172 aa11.19□□□□□ -0.62
TWNK-202ENST00000370228 TAF1BQ53T94 588 aaPredicted RBP11.19□□□□□ -0.62
TWNK-202ENST00000370228 LRRC55Q6ZSA7 311 aa11.19□□□□□ -0.62
TWNK-202ENST00000370228 METTL3Q86U44 580 aaKnown RBP11.19□□□□□ -0.62
TWNK-202ENST00000370228 RELL1Q8IUW5 271 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms