RNA–Protein interactions for RNA: ENST00000370096.7

COL11A1-203, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene COL11A1, Length 7,286 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-203ENST00000370096 CPB2Q96IY4 423 aa11.38□□□□□ -0.59
COL11A1-203ENST00000370096 COMMD9Q9P000 198 aa11.38□□□□□ -0.59
COL11A1-203ENST00000370096 VPS9D1Q9Y2B5 631 aa11.38□□□□□ -0.59
COL11A1-203ENST00000370096 ABCA5Q8WWZ7 1642 aa11.38□□□□□ -0.59
COL11A1-203ENST00000370096 LCA5LO95447 670 aa11.38□□□□□ -0.59
COL11A1-203ENST00000370096 N4BP2L1Q5TBK1 243 aaPredicted RBP11.38□□□□□ -0.59
COL11A1-203ENST00000370096 BHLHE22Q8NFJ8 381 aaPredicted RBP11.38□□□□□ -0.59
COL11A1-203ENST00000370096 POP1Q99575 1024 aaKnown RBP11.38□□□□□ -0.59
COL11A1-203ENST00000370096 ACTR8Q9H981 624 aa11.38□□□□□ -0.59
COL11A1-203ENST00000370096 VPS45Q9NRW7 570 aa11.38□□□□□ -0.59
COL11A1-203ENST00000370096 WHRNQ9P202 907 aa11.38□□□□□ -0.59
COL11A1-203ENST00000370096 COG5Q9UP83 839 aa11.38□□□□□ -0.59
COL11A1-203ENST00000370096 A8MX80 341 aa11.38□□□□□ -0.59
COL11A1-203ENST00000370096 TRIM3O75382 744 aaPredicted RBP11.38□□□□□ -0.59
COL11A1-203ENST00000370096 GARTP22102 1010 aa11.38□□□□□ -0.59
COL11A1-203ENST00000370096 ITGA9Q13797 1035 aa11.38□□□□□ -0.59
COL11A1-203ENST00000370096 ZIK1Q3SY52 487 aaPredicted RBP11.38□□□□□ -0.59
COL11A1-203ENST00000370096 RNASE12Q5GAN4 147 aaKnown RBP11.38□□□□□ -0.59
COL11A1-203ENST00000370096 MICALL2Q8IY33 904 aa11.38□□□□□ -0.59
COL11A1-203ENST00000370096 BTBD3Q9Y2F9 522 aa11.38□□□□□ -0.59
COL11A1-203ENST00000370096 NDUFAF1Q9Y375 327 aa11.38□□□□□ -0.59
COL11A1-203ENST00000370096 TPRKBQ9Y3C4 175 aa11.38□□□□□ -0.59
COL11A1-203ENST00000370096 H3BQF6 201 aa11.37□□□□□ -0.59
COL11A1-203ENST00000370096 PLOD3O60568 738 aa11.37□□□□□ -0.59
COL11A1-203ENST00000370096 SEC22BO75396 215 aa11.37□□□□□ -0.59
COL11A1-203ENST00000370096 CCDC130P13994 396 aa11.37□□□□□ -0.59
COL11A1-203ENST00000370096 PAN2Q504Q3 1202 aaKnown RBP11.37□□□□□ -0.59
COL11A1-203ENST00000370096 IER5Q5VY09 327 aa11.37□□□□□ -0.59
COL11A1-203ENST00000370096 DCP1BQ8IZD4 617 aaKnown RBP11.37□□□□□ -0.59
COL11A1-203ENST00000370096 ZFRQ96KR1 1074 aaKnown RBP11.37□□□□□ -0.59
COL11A1-203ENST00000370096 TIPINQ9BVW5 301 aa11.37□□□□□ -0.59
COL11A1-203ENST00000370096 ETAA1Q9NY74 926 aa11.37□□□□□ -0.59
COL11A1-203ENST00000370096 PIM2Q9P1W9 311 aa11.37□□□□□ -0.59
COL11A1-203ENST00000370096 PRKAB1Q9Y478 270 aa11.37□□□□□ -0.59
COL11A1-203ENST00000370096 ADGRL2O95490 1459 aa11.37□□□□□ -0.59
COL11A1-203ENST00000370096 PZPP20742 1482 aa11.37□□□□□ -0.59
COL11A1-203ENST00000370096 AFF2P51816 1311 aa11.37□□□□□ -0.59
COL11A1-203ENST00000370096 MROH7Q68CQ1 1323 aa11.37□□□□□ -0.59
COL11A1-203ENST00000370096 SYNCRIPO60506 623 aaKnown RBP11.37□□□□□ -0.59
COL11A1-203ENST00000370096 CDC40O60508 579 aaKnown RBP eCLIP11.37□□□□□ -0.59
COL11A1-203ENST00000370096 PPP2R1BP30154 601 aa11.37□□□□□ -0.59
COL11A1-203ENST00000370096 CCR4P51679 360 aa11.37□□□□□ -0.59
COL11A1-203ENST00000370096 CUL2Q13617 745 aa11.37□□□□□ -0.59
COL11A1-203ENST00000370096 RD3Q7Z3Z2 195 aa11.37□□□□□ -0.59
COL11A1-203ENST00000370096 BPIFB6Q8NFQ5 453 aa11.37□□□□□ -0.59
COL11A1-203ENST00000370096 NIF3L1Q9GZT8 377 aa11.37□□□□□ -0.59
COL11A1-203ENST00000370096 LRRC40Q9H9A6 602 aa11.37□□□□□ -0.59
COL11A1-203ENST00000370096 TCF7L2Q9NQB0 619 aa11.37□□□□□ -0.59
COL11A1-203ENST00000370096 AP4E1Q9UPM8 1137 aa11.37□□□□□ -0.59
COL11A1-203ENST00000370096 WDR27A2RRH5 827 aa11.37□□□□□ -0.59
COL11A1-203ENST00000370096 MBL2P11226 248 aaPredicted RBP11.37□□□□□ -0.59
COL11A1-203ENST00000370096 PON1P27169 355 aa11.37□□□□□ -0.59
COL11A1-203ENST00000370096 CBFBQ13951 182 aa11.37□□□□□ -0.59
COL11A1-203ENST00000370096 SLFN11Q7Z7L1 901 aa11.37□□□□□ -0.59
COL11A1-203ENST00000370096 COLGALT1Q8NBJ5 622 aa11.37□□□□□ -0.59
COL11A1-203ENST00000370096 PSMA8Q8TAA3 256 aa11.37□□□□□ -0.59
COL11A1-203ENST00000370096 SPACA7Q96KW9 195 aa11.37□□□□□ -0.59
COL11A1-203ENST00000370096 MID1IP1Q9NPA3 183 aa11.37□□□□□ -0.59
COL11A1-203ENST00000370096 LDLRP01130 860 aa11.37□□□□□ -0.59
COL11A1-203ENST00000370096 ZNF621Q6ZSS3 439 aa11.37□□□□□ -0.59
COL11A1-203ENST00000370096 FAM172AQ8WUF8 416 aa11.37□□□□□ -0.59
COL11A1-203ENST00000370096 SLITRK1Q96PX8 696 aa11.37□□□□□ -0.59
COL11A1-203ENST00000370096 SENP6Q9GZR1 1112 aaPredicted RBP11.37□□□□□ -0.59
COL11A1-203ENST00000370096 RABGEF1Q9UJ41 708 aa11.37□□□□□ -0.59
COL11A1-203ENST00000370096 PNMA8CA0A1B0GUJ8 204 aa11.37□□□□□ -0.59
COL11A1-203ENST00000370096 BCLAF3A2AJT9 711 aaKnown RBP11.37□□□□□ -0.59
COL11A1-203ENST00000370096 MTSS1O43312 755 aa11.37□□□□□ -0.59
COL11A1-203ENST00000370096 CBX6O95503 412 aa11.37□□□□□ -0.59
COL11A1-203ENST00000370096 SLC11A2P49281 568 aa11.37□□□□□ -0.59
COL11A1-203ENST00000370096 EXOSC10Q01780 885 aaKnown RBP11.37□□□□□ -0.59
COL11A1-203ENST00000370096 EIF2B5Q13144 721 aaKnown RBP11.37□□□□□ -0.59
COL11A1-203ENST00000370096 SCARF1Q14162 830 aa11.37□□□□□ -0.59
COL11A1-203ENST00000370096 ULK3Q6PHR2 472 aa11.37□□□□□ -0.59
COL11A1-203ENST00000370096 APOBEC3FQ8IUX4 373 aaKnown RBP11.37□□□□□ -0.59
COL11A1-203ENST00000370096 FAM20CQ8IXL6 584 aa11.37□□□□□ -0.59
COL11A1-203ENST00000370096 POC5Q8NA72 575 aa11.37□□□□□ -0.59
COL11A1-203ENST00000370096 CDRT15Q96T59 188 aa11.37□□□□□ -0.59
COL11A1-203ENST00000370096 FUT8Q9BYC5 575 aa11.37□□□□□ -0.59
COL11A1-203ENST00000370096 MTMR12Q9C0I1 747 aa11.37□□□□□ -0.59
COL11A1-203ENST00000370096 RPRD1BQ9NQG5 326 aaKnown RBP11.37□□□□□ -0.59
COL11A1-203ENST00000370096 MCUBQ9NWR8 336 aa11.37□□□□□ -0.59
COL11A1-203ENST00000370096 LNPEPQ9UIQ6 1025 aa11.37□□□□□ -0.59
COL11A1-203ENST00000370096 KIAA0391O15091 583 aaKnown RBP11.37□□□□□ -0.59
COL11A1-203ENST00000370096 RPN2P04844 631 aa11.37□□□□□ -0.59
COL11A1-203ENST00000370096 ACO1P21399 889 aaKnown RBP11.37□□□□□ -0.59
COL11A1-203ENST00000370096 CEBPGP53567 150 aa11.37□□□□□ -0.59
COL11A1-203ENST00000370096 RABL6Q3YEC7 729 aaPredicted RBP11.37□□□□□ -0.59
COL11A1-203ENST00000370096 PEG10Q86TG7 708 aaKnown RBP11.37□□□□□ -0.59
COL11A1-203ENST00000370096 TARS2Q9BW92 718 aaKnown RBP11.37□□□□□ -0.59
COL11A1-203ENST00000370096 ZNF304Q9HCX3 659 aa11.37□□□□□ -0.59
COL11A1-203ENST00000370096 A1CFQ9NQ94 594 aaKnown RBP11.37□□□□□ -0.59
COL11A1-203ENST00000370096 KCNH4Q9UQ05 1017 aa11.37□□□□□ -0.59
COL11A1-203ENST00000370096 PSMD12O00232 456 aaPredicted RBP11.36□□□□□ -0.59
COL11A1-203ENST00000370096 O00370 1275 aa11.36□□□□□ -0.59
COL11A1-203ENST00000370096 LIN7AO14910 233 aaPredicted RBP11.36□□□□□ -0.59
COL11A1-203ENST00000370096 RXRBP28702 533 aa11.36□□□□□ -0.59
COL11A1-203ENST00000370096 PCSK1P29120 753 aa11.36□□□□□ -0.59
COL11A1-203ENST00000370096 NPY2RP49146 381 aa11.36□□□□□ -0.59
COL11A1-203ENST00000370096 TRMT5Q32P41 509 aaKnown RBP11.36□□□□□ -0.59
COL11A1-203ENST00000370096 MZT2BQ6NZ67 158 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms