RNA–Protein interactions for RNA: ENST00000369747.7

UBE3D-203, Transcript of ubiquitin protein ligase E3D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3D, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-203ENST00000369747 MIS12Q9H081 205 aa18■□□□□ 0.47
UBE3D-203ENST00000369747 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18■□□□□ 0.47
UBE3D-203ENST00000369747 ASNSD1Q9NWL6 643 aa18■□□□□ 0.47
UBE3D-203ENST00000369747 FNIP2Q9P278 1114 aa18■□□□□ 0.47
UBE3D-203ENST00000369747 BCCIPQ9P287 314 aaKnown RBP eCLIP18■□□□□ 0.47
UBE3D-203ENST00000369747 ANAPC5Q9UJX4 755 aa18■□□□□ 0.47
UBE3D-203ENST00000369747 DRG1Q9Y295 367 aaKnown RBP18■□□□□ 0.47
UBE3D-203ENST00000369747 EFR3BQ9Y2G0 817 aa18■□□□□ 0.47
UBE3D-203ENST00000369747 IRAK3Q9Y616 596 aa18■□□□□ 0.47
UBE3D-203ENST00000369747 EPOPA6NHQ4 379 aa18■□□□□ 0.47
UBE3D-203ENST00000369747 EIF3HO15372 352 aaKnown RBP eCLIP18■□□□□ 0.47
UBE3D-203ENST00000369747 TRUB2O95900 331 aaKnown RBP18■□□□□ 0.47
UBE3D-203ENST00000369747 GPD1P21695 349 aa18■□□□□ 0.47
UBE3D-203ENST00000369747 NDUFV1P49821 464 aa18■□□□□ 0.47
UBE3D-203ENST00000369747 VCPP55072 806 aaKnown RBP18■□□□□ 0.47
UBE3D-203ENST00000369747 ADIGQ0VDE8 80 aa18■□□□□ 0.47
UBE3D-203ENST00000369747 RAB33AQ14088 237 aa18■□□□□ 0.47
UBE3D-203ENST00000369747 GSTA5Q7RTV2 222 aa18■□□□□ 0.47
UBE3D-203ENST00000369747 ALLCQ8N6M5 410 aa18■□□□□ 0.47
UBE3D-203ENST00000369747 GLIS1Q8NBF1 620 aa18■□□□□ 0.47
UBE3D-203ENST00000369747 SPPL2BQ8TCT7 592 aa18■□□□□ 0.47
UBE3D-203ENST00000369747 GPR152Q8TDT2 470 aa18■□□□□ 0.47
UBE3D-203ENST00000369747 CLEC4CQ8WTT0 213 aa18■□□□□ 0.47
UBE3D-203ENST00000369747 HSFY1Q96LI6 401 aa18■□□□□ 0.47
UBE3D-203ENST00000369747 SEPT5Q99719 369 aaPredicted RBP18■□□□□ 0.47
UBE3D-203ENST00000369747 CDC42EP4Q9H3Q1 356 aaKnown RBP18■□□□□ 0.47
UBE3D-203ENST00000369747 PCSK1NQ9UHG2 260 aa18■□□□□ 0.47
UBE3D-203ENST00000369747 NOVA2Q9UNW9 492 aaKnown RBP18■□□□□ 0.47
UBE3D-203ENST00000369747 C2orf71A6NGG8 1288 aa17.99■□□□□ 0.47
UBE3D-203ENST00000369747 A6NNZ2 444 aa17.99■□□□□ 0.47
UBE3D-203ENST00000369747 PAPSS1O43252 624 aaPredicted RBP17.99■□□□□ 0.47
UBE3D-203ENST00000369747 RNF8O76064 485 aa17.99■□□□□ 0.47
UBE3D-203ENST00000369747 SEC24AO95486 1093 aa17.99■□□□□ 0.47
UBE3D-203ENST00000369747 CD48P09326 243 aa17.99■□□□□ 0.47
UBE3D-203ENST00000369747 SPATA31D3P0C874 917 aa17.99■□□□□ 0.47
UBE3D-203ENST00000369747 HPDP32754 393 aaPredicted RBP17.99■□□□□ 0.47
UBE3D-203ENST00000369747 PCK1P35558 622 aa17.99■□□□□ 0.47
UBE3D-203ENST00000369747 SMARCB1Q12824 385 aa17.99■□□□□ 0.47
UBE3D-203ENST00000369747 TAF5Q15542 800 aa17.99■□□□□ 0.47
UBE3D-203ENST00000369747 MGAT5BQ3V5L5 792 aa17.99■□□□□ 0.47
UBE3D-203ENST00000369747 TUBB8Q3ZCM7 444 aa17.99■□□□□ 0.47
UBE3D-203ENST00000369747 SH3PXD2AQ5TCZ1 1133 aa17.99■□□□□ 0.47
UBE3D-203ENST00000369747 IZUMO3Q5VZ72 239 aa17.99■□□□□ 0.47
UBE3D-203ENST00000369747 OLFML1Q6UWY5 402 aa17.99■□□□□ 0.47
UBE3D-203ENST00000369747 VSTM1Q6UX27 236 aa17.99■□□□□ 0.47
UBE3D-203ENST00000369747 SPATA31D4Q6ZUB0 917 aa17.99■□□□□ 0.47
UBE3D-203ENST00000369747 TRMT10CQ7L0Y3 403 aaKnown RBP17.99■□□□□ 0.47
UBE3D-203ENST00000369747 HOOK3Q86VS8 718 aa17.99■□□□□ 0.47
UBE3D-203ENST00000369747 CMASQ8NFW8 434 aaPredicted RBP17.99■□□□□ 0.47
UBE3D-203ENST00000369747 RXFP2Q8WXD0 754 aa17.99■□□□□ 0.47
UBE3D-203ENST00000369747 NDRG1Q92597 394 aaKnown RBP17.99■□□□□ 0.47
UBE3D-203ENST00000369747 NKD2Q969F2 451 aaPredicted RBP17.99■□□□□ 0.47
UBE3D-203ENST00000369747 TLCD1Q96CP7 247 aa17.99■□□□□ 0.47
UBE3D-203ENST00000369747 PEBP4Q96S96 227 aa17.99■□□□□ 0.47
UBE3D-203ENST00000369747 CNPY3Q9BT09 278 aa17.99■□□□□ 0.47
UBE3D-203ENST00000369747 AFF4Q9UHB7 1163 aaKnown RBP17.99■□□□□ 0.47
UBE3D-203ENST00000369747 USP18Q9UMW8 372 aa17.99■□□□□ 0.47
UBE3D-203ENST00000369747 ZNF148Q9UQR1 794 aa17.99■□□□□ 0.47
UBE3D-203ENST00000369747 SSX2IPQ9Y2D8 614 aa17.99■□□□□ 0.47
UBE3D-203ENST00000369747 MAGEA11P43364 429 aa17.98■□□□□ 0.47
UBE3D-203ENST00000369747 GUCY1A3Q02108 690 aa17.98■□□□□ 0.47
UBE3D-203ENST00000369747 RAB6CQ53S08 254 aa17.98■□□□□ 0.47
UBE3D-203ENST00000369747 CYP4V2Q6ZWL3 525 aaPredicted RBP17.98■□□□□ 0.47
UBE3D-203ENST00000369747 BBOF1Q8ND07 529 aa17.98■□□□□ 0.47
UBE3D-203ENST00000369747 SCAMP5Q8TAC9 235 aa17.98■□□□□ 0.47
UBE3D-203ENST00000369747 UHMK1Q8TAS1 419 aaKnown RBP17.98■□□□□ 0.47
UBE3D-203ENST00000369747 SLC35B2Q8TB61 432 aa17.98■□□□□ 0.47
UBE3D-203ENST00000369747 C2orf15Q8WU43 125 aaKnown RBP17.98■□□□□ 0.47
UBE3D-203ENST00000369747 KCTD13Q8WZ19 329 aa17.98■□□□□ 0.47
UBE3D-203ENST00000369747 KLHL5Q96PQ7 755 aa17.98■□□□□ 0.47
UBE3D-203ENST00000369747 TMEM109Q9BVC6 243 aa17.98■□□□□ 0.47
UBE3D-203ENST00000369747 RAB6CQ9H0N0 254 aa17.98■□□□□ 0.47
UBE3D-203ENST00000369747 RFXAPO00287 272 aa17.98■□□□□ 0.47
UBE3D-203ENST00000369747 GRAP2O75791 330 aa17.98■□□□□ 0.47
UBE3D-203ENST00000369747 HAPLN1P10915 354 aaPredicted RBP17.98■□□□□ 0.47
UBE3D-203ENST00000369747 PDGFRAP16234 1089 aa17.98■□□□□ 0.47
UBE3D-203ENST00000369747 TKTL1P51854 596 aa17.98■□□□□ 0.47
UBE3D-203ENST00000369747 MAGOHP61326 146 aaKnown RBP17.98■□□□□ 0.47
UBE3D-203ENST00000369747 C15orf59Q2T9L4 293 aaPredicted RBP17.98■□□□□ 0.47
UBE3D-203ENST00000369747 P3H1Q32P28 736 aa17.98■□□□□ 0.47
UBE3D-203ENST00000369747 RAB41Q5JT25 222 aa17.98■□□□□ 0.47
UBE3D-203ENST00000369747 TPGS2Q68CL5 300 aa17.98■□□□□ 0.47
UBE3D-203ENST00000369747 HIBCHQ6NVY1 386 aaPredicted RBP17.98■□□□□ 0.47
UBE3D-203ENST00000369747 BBS12Q6ZW61 710 aa17.98■□□□□ 0.47
UBE3D-203ENST00000369747 GDPD5Q8WTR4 605 aa17.98■□□□□ 0.47
UBE3D-203ENST00000369747 TIFAQ96CG3 184 aa17.98■□□□□ 0.47
UBE3D-203ENST00000369747 PWWP2AQ96N64 755 aa17.98■□□□□ 0.47
UBE3D-203ENST00000369747 DDX23Q9BUQ8 820 aaKnown RBP17.98■□□□□ 0.47
UBE3D-203ENST00000369747 TSPYL1Q9H0U9 437 aa17.98■□□□□ 0.47
UBE3D-203ENST00000369747 ADAM7Q9H2U9 754 aa17.98■□□□□ 0.47
UBE3D-203ENST00000369747 LRRC4Q9HBW1 653 aa17.98■□□□□ 0.47
UBE3D-203ENST00000369747 NGRNQ9NPE2 291 aaKnown RBP17.98■□□□□ 0.47
UBE3D-203ENST00000369747 C5orf42Q9H799 3197 aa17.97■□□□□ 0.47
UBE3D-203ENST00000369747 TNFRSF10BO14763 440 aa17.97■□□□□ 0.47
UBE3D-203ENST00000369747 TGM5O43548 720 aa17.97■□□□□ 0.47
UBE3D-203ENST00000369747 CST8O60676 142 aa17.97■□□□□ 0.47
UBE3D-203ENST00000369747 ITGAVP06756 1048 aa17.97■□□□□ 0.47
UBE3D-203ENST00000369747 ZSCAN5DPP0CG00 497 aa17.97■□□□□ 0.47
UBE3D-203ENST00000369747 ETS1P14921 441 aa17.97■□□□□ 0.47
UBE3D-203ENST00000369747 MDH1P40925 334 aaKnown RBP17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms