RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 GANQ9H2C0 597 aa21.44■■□□□ 1.02
SMNDC1-201ENST00000369592 TJP2Q9UDY2 1190 aa21.44■■□□□ 1.02
SMNDC1-201ENST00000369592 LIMA1Q9UHB6 759 aaKnown RBP21.44■■□□□ 1.02
SMNDC1-201ENST00000369592 SLC27A6Q9Y2P4 619 aa21.44■■□□□ 1.02
SMNDC1-201ENST00000369592 E5RJQ4 531 aa21.43■■□□□ 1.02
SMNDC1-201ENST00000369592 SART1O43290 800 aaKnown RBP21.43■■□□□ 1.02
SMNDC1-201ENST00000369592 MSI1O43347 362 aaKnown RBP21.43■■□□□ 1.02
SMNDC1-201ENST00000369592 USP8P40818 1118 aa21.43■■□□□ 1.02
SMNDC1-201ENST00000369592 PXNP49023 591 aaPredicted RBP21.43■■□□□ 1.02
SMNDC1-201ENST00000369592 MYL5Q02045 173 aa21.43■■□□□ 1.02
SMNDC1-201ENST00000369592 PTK2Q05397 1052 aa21.43■■□□□ 1.02
SMNDC1-201ENST00000369592 RING1Q06587 406 aa21.43■■□□□ 1.02
SMNDC1-201ENST00000369592 EIF4EBP2Q13542 120 aaPredicted RBP21.43■■□□□ 1.02
SMNDC1-201ENST00000369592 PREPLQ4J6C6 727 aaPredicted RBP21.43■■□□□ 1.02
SMNDC1-201ENST00000369592 RNF43Q68DV7 783 aa21.43■■□□□ 1.02
SMNDC1-201ENST00000369592 TMEM92Q6UXU6 159 aa21.43■■□□□ 1.02
SMNDC1-201ENST00000369592 TOGARAM2Q6ZUX3 1019 aa21.43■■□□□ 1.02
SMNDC1-201ENST00000369592 XPO6Q96QU8 1125 aaKnown RBP21.43■■□□□ 1.02
SMNDC1-201ENST00000369592 HHIPQ96QV1 700 aa21.43■■□□□ 1.02
SMNDC1-201ENST00000369592 CPXM1Q96SM3 734 aa21.43■■□□□ 1.02
SMNDC1-201ENST00000369592 DNAJC17Q9NVM6 304 aaKnown RBP21.43■■□□□ 1.02
SMNDC1-201ENST00000369592 SIK3Q9Y2K2 1263 aa21.43■■□□□ 1.02
SMNDC1-201ENST00000369592 TBC1D3BA6NDS4 549 aa21.42■■□□□ 1.02
SMNDC1-201ENST00000369592 PRRT4C9JH25 899 aa21.42■■□□□ 1.02
SMNDC1-201ENST00000369592 SGK1O00141 431 aa21.42■■□□□ 1.02
SMNDC1-201ENST00000369592 APBB3O95704 486 aa21.42■■□□□ 1.02
SMNDC1-201ENST00000369592 IGLV3-25P01717 112 aa21.42■■□□□ 1.02
SMNDC1-201ENST00000369592 TGM1P22735 817 aa21.42■■□□□ 1.02
SMNDC1-201ENST00000369592 CDH5P33151 784 aaPredicted RBP21.42■■□□□ 1.02
SMNDC1-201ENST00000369592 TYRO3Q06418 890 aa21.42■■□□□ 1.02
SMNDC1-201ENST00000369592 NNTQ13423 1086 aa21.42■■□□□ 1.02
SMNDC1-201ENST00000369592 CRY1Q16526 586 aa21.42■■□□□ 1.02
SMNDC1-201ENST00000369592 GRAMD4Q6IC98 578 aa21.42■■□□□ 1.02
SMNDC1-201ENST00000369592 ALLCQ8N6M5 410 aa21.42■■□□□ 1.02
SMNDC1-201ENST00000369592 DQX1Q8TE96 717 aaKnown RBP21.42■■□□□ 1.02
SMNDC1-201ENST00000369592 DDX1Q92499 740 aaKnown RBP21.42■■□□□ 1.02
SMNDC1-201ENST00000369592 AZIN2Q96A70 460 aa21.42■■□□□ 1.02
SMNDC1-201ENST00000369592 SLC39A13Q96H72 371 aa21.42■■□□□ 1.02
SMNDC1-201ENST00000369592 PIWIL1Q96J94 861 aaKnown RBP21.42■■□□□ 1.02
SMNDC1-201ENST00000369592 CNTNAP3BQ96NU0 1288 aa21.42■■□□□ 1.02
SMNDC1-201ENST00000369592 LSM14BQ9BX40 385 aaKnown RBP21.42■■□□□ 1.02
SMNDC1-201ENST00000369592 STK33Q9BYT3 514 aa21.42■■□□□ 1.02
SMNDC1-201ENST00000369592 CNTNAP3Q9BZ76 1288 aa21.42■■□□□ 1.02
SMNDC1-201ENST00000369592 VPS16Q9H269 839 aa21.42■■□□□ 1.02
SMNDC1-201ENST00000369592 CD248Q9HCU0 757 aa21.42■■□□□ 1.02
SMNDC1-201ENST00000369592 ST7Q9NRC1 585 aa21.42■■□□□ 1.02
SMNDC1-201ENST00000369592 CLEC4EQ9ULY5 219 aa21.42■■□□□ 1.02
SMNDC1-201ENST00000369592 ABCA7Q8IZY2 2146 aa21.41■■□□□ 1.02
SMNDC1-201ENST00000369592 PLXND1Q9Y4D7 1925 aa21.41■■□□□ 1.02
SMNDC1-201ENST00000369592 KLF8O95600 359 aaPredicted RBP21.41■■□□□ 1.02
SMNDC1-201ENST00000369592 TIE1P35590 1138 aa21.41■■□□□ 1.02
SMNDC1-201ENST00000369592 HARS2P49590 506 aaKnown RBP21.41■■□□□ 1.02
SMNDC1-201ENST00000369592 PUM1Q14671 1186 aaKnown RBP eCLIP21.41■■□□□ 1.022e-7■□□□□ 11.2
SMNDC1-201ENST00000369592 SYPL2Q5VXT5 272 aa21.41■■□□□ 1.02
SMNDC1-201ENST00000369592 DCLK2Q8N568 766 aa21.41■■□□□ 1.02
SMNDC1-201ENST00000369592 CCDC33Q8N5R6 958 aa21.41■■□□□ 1.02
SMNDC1-201ENST00000369592 TXNDC5Q8NBS9 432 aaKnown RBP21.41■■□□□ 1.02
SMNDC1-201ENST00000369592 GAB3Q8WWW8 586 aa21.41■■□□□ 1.02
SMNDC1-201ENST00000369592 FCRL2Q96LA5 508 aaPredicted RBP21.41■■□□□ 1.02
SMNDC1-201ENST00000369592 HINFPQ9BQA5 517 aa21.41■■□□□ 1.02
SMNDC1-201ENST00000369592 PLK2Q9NYY3 685 aa21.41■■□□□ 1.02
SMNDC1-201ENST00000369592 NAALADL1Q9UQQ1 740 aa21.41■■□□□ 1.02
SMNDC1-201ENST00000369592 AXIN1O15169 862 aa21.4■■□□□ 1.02
SMNDC1-201ENST00000369592 NCAM1P13591 858 aa21.4■■□□□ 1.02
SMNDC1-201ENST00000369592 DGKGP49619 791 aa21.4■■□□□ 1.02
SMNDC1-201ENST00000369592 KLK7P49862 253 aa21.4■■□□□ 1.02
SMNDC1-201ENST00000369592 DGKEP52429 567 aa21.4■■□□□ 1.02
SMNDC1-201ENST00000369592 COPB1P53618 953 aaKnown RBP21.4■■□□□ 1.02
SMNDC1-201ENST00000369592 BPIFB4P59827 614 aa21.4■■□□□ 1.02
SMNDC1-201ENST00000369592 C10orf76Q5T2E6 689 aa21.4■■□□□ 1.02
SMNDC1-201ENST00000369592 ADGRF1Q5T601 910 aa21.4■■□□□ 1.02
SMNDC1-201ENST00000369592 FUCA2Q9BTY2 467 aa21.4■■□□□ 1.02
SMNDC1-201ENST00000369592 SLC2A11Q9BYW1 496 aa21.4■■□□□ 1.02
SMNDC1-201ENST00000369592 IRX2Q9BZI1 471 aaPredicted RBP21.4■■□□□ 1.02
SMNDC1-201ENST00000369592 ASNSD1Q9NWL6 643 aa21.4■■□□□ 1.02
SMNDC1-201ENST00000369592 RALGAPA1Q6GYQ0 2036 aa21.39■■□□□ 1.02
SMNDC1-201ENST00000369592 F8VZ95 297 aa21.39■■□□□ 1.01
SMNDC1-201ENST00000369592 EPHB6O15197 1021 aa21.39■■□□□ 1.01
SMNDC1-201ENST00000369592 GLI1P08151 1106 aa21.39■■□□□ 1.01
SMNDC1-201ENST00000369592 CYP11B1P15538 503 aa21.39■■□□□ 1.01
SMNDC1-201ENST00000369592 HOXD9P28356 352 aaPredicted RBP21.39■■□□□ 1.01
SMNDC1-201ENST00000369592 JAM2P57087 298 aa21.39■■□□□ 1.01
SMNDC1-201ENST00000369592 ZNF445P59923 1031 aa21.39■■□□□ 1.01
SMNDC1-201ENST00000369592 YWHAZP63104 245 aaKnown RBP21.39■■□□□ 1.01
SMNDC1-201ENST00000369592 SIM2Q14190 667 aaPredicted RBP21.39■■□□□ 1.01
SMNDC1-201ENST00000369592 TAF5Q15542 800 aa21.39■■□□□ 1.01
SMNDC1-201ENST00000369592 PTPN20Q4JDL3 420 aa21.39■■□□□ 1.01
SMNDC1-201ENST00000369592 FAM133BQ5BKY9 247 aaKnown RBP21.39■■□□□ 1.01
SMNDC1-201ENST00000369592 LAIR1Q6GTX8 287 aa21.39■■□□□ 1.01
SMNDC1-201ENST00000369592 PASD1Q8IV76 773 aa21.39■■□□□ 1.01
SMNDC1-201ENST00000369592 GOLGA1Q92805 767 aa21.39■■□□□ 1.01
SMNDC1-201ENST00000369592 PPP1R13BQ96KQ4 1090 aa21.39■■□□□ 1.01
SMNDC1-201ENST00000369592 SLC2A13Q96QE2 648 aa21.39■■□□□ 1.01
SMNDC1-201ENST00000369592 BPIFA3Q9BQP9 254 aa21.39■■□□□ 1.01
SMNDC1-201ENST00000369592 POPDC2Q9HBU9 364 aa21.39■■□□□ 1.01
SMNDC1-201ENST00000369592 ZDHHC4Q9NPG8 344 aa21.39■■□□□ 1.01
SMNDC1-201ENST00000369592 TLR6Q9Y2C9 796 aa21.39■■□□□ 1.01
SMNDC1-201ENST00000369592 TPRP12270 2363 aaKnown RBP21.38■■□□□ 1.01
SMNDC1-201ENST00000369592 LGALS16A8MUM7 142 aa21.38■■□□□ 1.01
SMNDC1-201ENST00000369592 TBX4P57082 545 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms