RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 NXPE3Q969Y0 559 aa14.47□□□□□ -0.09
TPM3-211ENST00000368531 PLD4Q96BZ4 506 aa14.47□□□□□ -0.09
TPM3-211ENST00000368531 BTBD6Q96KE9 485 aa14.47□□□□□ -0.09
TPM3-211ENST00000368531 ZNF830Q96NB3 372 aaPredicted RBP14.47□□□□□ -0.09
TPM3-211ENST00000368531 UHRF1Q96T88 793 aaPredicted RBP14.47□□□□□ -0.09
TPM3-211ENST00000368531 RAB6CQ9H0N0 254 aa14.47□□□□□ -0.09
TPM3-211ENST00000368531 LINC00597Q9H2U6 94 aa14.47□□□□□ -0.09
TPM3-211ENST00000368531 BRD9Q9H8M2 597 aa14.47□□□□□ -0.09
TPM3-211ENST00000368531 DUS2Q9NX74 493 aaKnown RBP14.47□□□□□ -0.09
TPM3-211ENST00000368531 CALCOCO1Q9P1Z2 691 aa14.47□□□□□ -0.09
TPM3-211ENST00000368531 TLR6Q9Y2C9 796 aa14.47□□□□□ -0.09
TPM3-211ENST00000368531 SCINQ9Y6U3 715 aa14.47□□□□□ -0.09
TPM3-211ENST00000368531 MYOFQ9NZM1 2061 aa14.46□□□□□ -0.09
TPM3-211ENST00000368531 E2F8A0AVK6 867 aa14.46□□□□□ -0.09
TPM3-211ENST00000368531 TMEM191CA6NGB0 347 aa14.46□□□□□ -0.09
TPM3-211ENST00000368531 CCP110O43303 1012 aa14.46□□□□□ -0.09
TPM3-211ENST00000368531 MOCS2O96007 188 aaPredicted RBP14.46□□□□□ -0.09
TPM3-211ENST00000368531 IGLV3-25P01717 112 aa14.46□□□□□ -0.09
TPM3-211ENST00000368531 ARSAP15289 507 aa14.46□□□□□ -0.09
TPM3-211ENST00000368531 PSMA2P25787 234 aa14.46□□□□□ -0.09
TPM3-211ENST00000368531 IFNAR2P48551 515 aa14.46□□□□□ -0.09
TPM3-211ENST00000368531 HARS2P49590 506 aaKnown RBP14.46□□□□□ -0.09
TPM3-211ENST00000368531 KPNA1P52294 538 aaPredicted RBP14.46□□□□□ -0.09
TPM3-211ENST00000368531 C10orf76Q5T2E6 689 aa14.46□□□□□ -0.09
TPM3-211ENST00000368531 SND1Q7KZF4 910 aaKnown RBP eCLIP14.46□□□□□ -0.09
TPM3-211ENST00000368531 ARCQ7LC44 396 aa14.46□□□□□ -0.09
TPM3-211ENST00000368531 KIAA1328Q86T90 577 aa14.46□□□□□ -0.09
TPM3-211ENST00000368531 CCDC112Q8NEF3 446 aa14.46□□□□□ -0.09
TPM3-211ENST00000368531 DEPDC1BQ8WUY9 529 aa14.46□□□□□ -0.09
TPM3-211ENST00000368531 ASIC4Q96FT7 647 aa14.46□□□□□ -0.09
TPM3-211ENST00000368531 PDLIM2Q96JY6 352 aa14.46□□□□□ -0.09
TPM3-211ENST00000368531 FCRL2Q96LA5 508 aaPredicted RBP14.46□□□□□ -0.09
TPM3-211ENST00000368531 EBF3Q9H4W6 596 aa14.46□□□□□ -0.09
TPM3-211ENST00000368531 LUC7LQ9NQ29 371 aaKnown RBP14.46□□□□□ -0.09
TPM3-211ENST00000368531 PIGVQ9NUD9 493 aa14.46□□□□□ -0.09
TPM3-211ENST00000368531 RRN3Q9NYV6 651 aa14.46□□□□□ -0.09
TPM3-211ENST00000368531 MUTYHQ9UIF7 546 aa14.46□□□□□ -0.09
TPM3-211ENST00000368531 ANAPC7Q9UJX3 599 aa14.46□□□□□ -0.09
TPM3-211ENST00000368531 REXO2Q9Y3B8 237 aaKnown RBP14.46□□□□□ -0.09
TPM3-211ENST00000368531 TMEM110-MUSTN1A8MSY1 372 aa14.45□□□□□ -0.1
TPM3-211ENST00000368531 NRDCO43847 1150 aa14.45□□□□□ -0.1
TPM3-211ENST00000368531 IGLV3-27P01718 113 aa14.45□□□□□ -0.1
TPM3-211ENST00000368531 APOEP02649 317 aa14.45□□□□□ -0.1
TPM3-211ENST00000368531 TCF3P15923 654 aa14.45□□□□□ -0.1
TPM3-211ENST00000368531 ZNF143P52747 638 aaPredicted RBP14.45□□□□□ -0.1
TPM3-211ENST00000368531 CCZ1BP86790 482 aa14.45□□□□□ -0.1
TPM3-211ENST00000368531 CCZ1P86791 482 aaPredicted RBP14.45□□□□□ -0.1
TPM3-211ENST00000368531 TNK2Q07912 1038 aa14.45□□□□□ -0.1
TPM3-211ENST00000368531 FCHO2Q0JRZ9 810 aa14.45□□□□□ -0.1
TPM3-211ENST00000368531 ARHGAP29Q52LW3 1261 aa14.45□□□□□ -0.1
TPM3-211ENST00000368531 SCYL2Q6P3W7 929 aa14.45□□□□□ -0.1
TPM3-211ENST00000368531 HTR3DQ70Z44 454 aa14.45□□□□□ -0.1
TPM3-211ENST00000368531 FAM131BQ86XD5 332 aa14.45□□□□□ -0.1
TPM3-211ENST00000368531 UNC45BQ8IWX7 931 aa14.45□□□□□ -0.1
TPM3-211ENST00000368531 SLC35G2Q8TBE7 412 aa14.45□□□□□ -0.1
TPM3-211ENST00000368531 ZNF564Q8TBZ8 553 aaPredicted RBP14.45□□□□□ -0.1
TPM3-211ENST00000368531 FAM172AQ8WUF8 416 aa14.45□□□□□ -0.1
TPM3-211ENST00000368531 OSCP1Q8WVF1 389 aa14.45□□□□□ -0.1
TPM3-211ENST00000368531 NT5C3BQ969T7 300 aa14.45□□□□□ -0.1
TPM3-211ENST00000368531 SLC39A13Q96H72 371 aa14.45□□□□□ -0.1
TPM3-211ENST00000368531 CNPY3Q9BT09 278 aa14.45□□□□□ -0.1
TPM3-211ENST00000368531 DCLK3Q9C098 648 aa14.45□□□□□ -0.1
TPM3-211ENST00000368531 OSGEPQ9NPF4 335 aa14.45□□□□□ -0.1
TPM3-211ENST00000368531 AGO1Q9UL18 857 aaKnown RBP14.45□□□□□ -0.1
TPM3-211ENST00000368531 SORCS3Q9UPU3 1222 aa14.45□□□□□ -0.1
TPM3-211ENST00000368531 GOLGA6L7A0A1B0GV03 622 aa14.44□□□□□ -0.1
TPM3-211ENST00000368531 RCCD1A6NED2 376 aa14.44□□□□□ -0.1
TPM3-211ENST00000368531 TRDMT1O14717 391 aaKnown RBP14.44□□□□□ -0.1
TPM3-211ENST00000368531 SLC9A3R1O14745 358 aaPredicted RBP14.44□□□□□ -0.1
TPM3-211ENST00000368531 CHADO15335 359 aa14.44□□□□□ -0.1
TPM3-211ENST00000368531 ARHGAP6O43182 974 aa14.44□□□□□ -0.1
TPM3-211ENST00000368531 GREM1O60565 184 aa14.44□□□□□ -0.1
TPM3-211ENST00000368531 F9P00740 461 aa14.44□□□□□ -0.1
TPM3-211ENST00000368531 CCR1P32246 355 aa14.44□□□□□ -0.1
TPM3-211ENST00000368531 RDXP35241 583 aaKnown RBP14.44□□□□□ -0.1
TPM3-211ENST00000368531 PTPN9P43378 593 aa14.44□□□□□ -0.1
TPM3-211ENST00000368531 NOP2P46087 812 aaKnown RBP14.44□□□□□ -0.1
TPM3-211ENST00000368531 VCPP55072 806 aaKnown RBP14.44□□□□□ -0.1
TPM3-211ENST00000368531 KRT83P78385 493 aa14.44□□□□□ -0.1
TPM3-211ENST00000368531 RING1Q06587 406 aa14.44□□□□□ -0.1
TPM3-211ENST00000368531 ZNF252P-AS1Q0IIN9 211 aa14.44□□□□□ -0.1
TPM3-211ENST00000368531 CCDC173Q0VFZ6 552 aa14.44□□□□□ -0.1
TPM3-211ENST00000368531 NNTQ13423 1086 aa14.44□□□□□ -0.1
TPM3-211ENST00000368531 DAB2IPQ5VWQ8 1189 aa14.44□□□□□ -0.1
TPM3-211ENST00000368531 NUGGCQ68CJ6 796 aa14.44□□□□□ -0.1
TPM3-211ENST00000368531 CSGALNACT1Q8TDX6 532 aa14.44□□□□□ -0.1
TPM3-211ENST00000368531 FAM83CQ9BQN1 747 aa14.44□□□□□ -0.1
TPM3-211ENST00000368531 WDCPQ9H6R7 721 aa14.44□□□□□ -0.1
TPM3-211ENST00000368531 TMPRSS4Q9NRS4 437 aa14.44□□□□□ -0.1
TPM3-211ENST00000368531 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.44□□□□□ -0.1
TPM3-211ENST00000368531 GTSE1Q9NYZ3 720 aa14.44□□□□□ -0.1
TPM3-211ENST00000368531 TBC1D14Q9P2M4 693 aa14.44□□□□□ -0.1
TPM3-211ENST00000368531 XPO7Q9UIA9 1087 aaKnown RBP14.44□□□□□ -0.1
TPM3-211ENST00000368531 INTUQ9ULD6 942 aa14.44□□□□□ -0.1
TPM3-211ENST00000368531 XIRP2A4UGR9 3374 aa14.43□□□□□ -0.1
TPM3-211ENST00000368531 A0A0U1RQJ8 604 aa14.43□□□□□ -0.1
TPM3-211ENST00000368531 MYO1FO00160 1098 aa14.43□□□□□ -0.1
TPM3-211ENST00000368531 TSPAN3O60637 253 aa14.43□□□□□ -0.1
TPM3-211ENST00000368531 SLC34A2O95436 690 aa14.43□□□□□ -0.1
TPM3-211ENST00000368531 SRFP11831 508 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms