RNA–Protein interactions for RNA: ENST00000368521.9

C1orf43-206, Transcript of chromosome 1 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C1orf43, Length 1,708 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf43-206ENST00000368521 PRKD1Q15139 912 aaPredicted RBP15.4■□□□□ 0.06
C1orf43-206ENST00000368521 SLC1A5Q15758 541 aa15.4■□□□□ 0.06
C1orf43-206ENST00000368521 SPRED3Q2MJR0 410 aa15.4■□□□□ 0.06
C1orf43-206ENST00000368521 KBTBD12Q3ZCT8 623 aa15.4■□□□□ 0.06
C1orf43-206ENST00000368521 TTC39BQ5VTQ0 682 aaPredicted RBP15.4■□□□□ 0.06
C1orf43-206ENST00000368521 PDZD4Q76G19 769 aaPredicted RBP15.4■□□□□ 0.06
C1orf43-206ENST00000368521 BEND5Q7L4P6 421 aa15.4■□□□□ 0.06
C1orf43-206ENST00000368521 C4orf33Q8N1A6 199 aa15.4■□□□□ 0.06
C1orf43-206ENST00000368521 SIX6OS1Q8N1H7 587 aa15.4■□□□□ 0.06
C1orf43-206ENST00000368521 IRGQQ8WZA9 623 aa15.4■□□□□ 0.06
C1orf43-206ENST00000368521 SIGLEC10Q96LC7 697 aa15.4■□□□□ 0.06
C1orf43-206ENST00000368521 SPATA13Q96N96 652 aa15.4■□□□□ 0.06
C1orf43-206ENST00000368521 EBNA1BP2Q99848 306 aaKnown RBP15.4■□□□□ 0.06
C1orf43-206ENST00000368521 KIF9Q9HAQ2 790 aa15.4■□□□□ 0.06
C1orf43-206ENST00000368521 SPC25Q9HBM1 224 aa15.4■□□□□ 0.06
C1orf43-206ENST00000368521 SLC40A1Q9NP59 571 aa15.4■□□□□ 0.06
C1orf43-206ENST00000368521 ARHGEF4Q9NR80 690 aa15.4■□□□□ 0.06
C1orf43-206ENST00000368521 TMEM51Q9NW97 253 aa15.4■□□□□ 0.06
C1orf43-206ENST00000368521 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.4■□□□□ 0.068e-9■□□□□ 8.2
C1orf43-206ENST00000368521 ZC3H7BQ9UGR2 993 aaKnown RBP15.4■□□□□ 0.06
C1orf43-206ENST00000368521 PHTF1Q9UMS5 762 aa15.4■□□□□ 0.06
C1orf43-206ENST00000368521 TTLL3Q9Y4R7 772 aa15.4■□□□□ 0.06
C1orf43-206ENST00000368521 TRIP12Q14669 1992 aaPredicted RBP15.4■□□□□ 0.06
C1orf43-206ENST00000368521 PPP1R12AO14974 1030 aaPredicted RBP15.4■□□□□ 0.06
C1orf43-206ENST00000368521 NCAM2O15394 837 aa15.4■□□□□ 0.06
C1orf43-206ENST00000368521 ATP5HO75947 161 aa15.4■□□□□ 0.06
C1orf43-206ENST00000368521 KRT37O76014 449 aa15.4■□□□□ 0.06
C1orf43-206ENST00000368521 F9P00740 461 aa15.4■□□□□ 0.06
C1orf43-206ENST00000368521 APOEP02649 317 aa15.4■□□□□ 0.06
C1orf43-206ENST00000368521 APRTP07741 180 aa15.4■□□□□ 0.06
C1orf43-206ENST00000368521 CNTFP26441 200 aa15.4■□□□□ 0.06
C1orf43-206ENST00000368521 PCSK1P29120 753 aa15.4■□□□□ 0.06
C1orf43-206ENST00000368521 HNRNPH1P31943 449 aaKnown RBP15.4■□□□□ 0.06
C1orf43-206ENST00000368521 NEK3P51956 506 aa15.4■□□□□ 0.06
C1orf43-206ENST00000368521 YWHAGP61981 247 aaKnown RBP eCLIP15.4■□□□□ 0.06
C1orf43-206ENST00000368521 DNAJC3Q13217 504 aa15.4■□□□□ 0.06
C1orf43-206ENST00000368521 PTK7Q13308 1070 aa15.4■□□□□ 0.06
C1orf43-206ENST00000368521 NAB1Q13506 487 aa15.4■□□□□ 0.06
C1orf43-206ENST00000368521 MFSD14CQ5VZR4 134 aa15.4■□□□□ 0.06
C1orf43-206ENST00000368521 STEAP4Q687X5 459 aa15.4■□□□□ 0.06
C1orf43-206ENST00000368521 CAPN12Q6ZSI9 719 aa15.4■□□□□ 0.06
C1orf43-206ENST00000368521 AGGF1Q8N302 714 aaeCLIP15.4■□□□□ 0.06
C1orf43-206ENST00000368521 ZNF276Q8N554 614 aa15.4■□□□□ 0.06
C1orf43-206ENST00000368521 APOPT1Q96IL0 206 aa15.4■□□□□ 0.06
C1orf43-206ENST00000368521 NAT9Q9BTE0 207 aa15.4■□□□□ 0.06
C1orf43-206ENST00000368521 CSNK1G1Q9HCP0 422 aa15.4■□□□□ 0.06
C1orf43-206ENST00000368521 MLXIPLQ9NP71 852 aa15.4■□□□□ 0.06
C1orf43-206ENST00000368521 DDX43Q9NXZ2 648 aaKnown RBP15.4■□□□□ 0.06
C1orf43-206ENST00000368521 USH1CQ9Y6N9 552 aa15.4■□□□□ 0.06
C1orf43-206ENST00000368521 COL4A4P53420 1690 aaPredicted RBP15.39■□□□□ 0.05
C1orf43-206ENST00000368521 KLF11O14901 512 aa15.39■□□□□ 0.05
C1orf43-206ENST00000368521 CYP11A1P05108 521 aa15.39■□□□□ 0.05
C1orf43-206ENST00000368521 SNRPAP09012 282 aaKnown RBP15.39■□□□□ 0.05
C1orf43-206ENST00000368521 SERPINB9P50453 376 aa15.39■□□□□ 0.05
C1orf43-206ENST00000368521 NRLP54845 237 aa15.39■□□□□ 0.05
C1orf43-206ENST00000368521 DAOAP59103 153 aa15.39■□□□□ 0.05
C1orf43-206ENST00000368521 SREBF2Q12772 1141 aa15.39■□□□□ 0.05
C1orf43-206ENST00000368521 SEMA3BQ13214 749 aa15.39■□□□□ 0.05
C1orf43-206ENST00000368521 DPYSQ14117 519 aa15.39■□□□□ 0.05
C1orf43-206ENST00000368521 EFTUD2Q15029 972 aaKnown RBP eCLIP15.39■□□□□ 0.052e-6■■□□□ 13
C1orf43-206ENST00000368521 NBPF20Q3BBV1 942 aa15.39■□□□□ 0.05
C1orf43-206ENST00000368521 DCAF6Q58WW2 860 aa15.39■□□□□ 0.05
C1orf43-206ENST00000368521 LVRNQ6Q4G3 990 aa15.39■□□□□ 0.05
C1orf43-206ENST00000368521 PAXIP1Q6ZW49 1069 aaPredicted RBP15.39■□□□□ 0.05
C1orf43-206ENST00000368521 ZNF534Q76KX8 674 aa15.39■□□□□ 0.05
C1orf43-206ENST00000368521 TRPV1Q8NER1 839 aa15.39■□□□□ 0.05
C1orf43-206ENST00000368521 GSDMBQ8TAX9 411 aa15.39■□□□□ 0.05
C1orf43-206ENST00000368521 CCDC110Q8TBZ0 833 aa15.39■□□□□ 0.05
C1orf43-206ENST00000368521 MAGEC3Q8TD91 643 aa15.39■□□□□ 0.05
C1orf43-206ENST00000368521 RNF139Q8WU17 664 aa15.39■□□□□ 0.05
C1orf43-206ENST00000368521 ZNF75CPQ92670 426 aaPredicted RBP15.39■□□□□ 0.05
C1orf43-206ENST00000368521 SYT15Q9BQS2 421 aa15.39■□□□□ 0.05
C1orf43-206ENST00000368521 TRIM62Q9BVG3 475 aa15.39■□□□□ 0.05
C1orf43-206ENST00000368521 CRTAC1Q9NQ79 661 aa15.39■□□□□ 0.05
C1orf43-206ENST00000368521 ABCF3Q9NUQ8 709 aa15.39■□□□□ 0.05
C1orf43-206ENST00000368521 SQORQ9Y6N5 450 aa15.39■□□□□ 0.05
C1orf43-206ENST00000368521 FAM159BA6NKW6 160 aa15.38■□□□□ 0.05
C1orf43-206ENST00000368521 ALDH1A2O94788 518 aa15.38■□□□□ 0.05
C1orf43-206ENST00000368521 TGDSO95455 350 aa15.38■□□□□ 0.05
C1orf43-206ENST00000368521 METTL18O95568 372 aa15.38■□□□□ 0.05
C1orf43-206ENST00000368521 C6orf222P0C671 652 aaPredicted RBP15.38■□□□□ 0.05
C1orf43-206ENST00000368521 GOT1P17174 413 aa15.38■□□□□ 0.05
C1orf43-206ENST00000368521 AMPD1P23109 780 aa15.38■□□□□ 0.05
C1orf43-206ENST00000368521 ALDH3A1P30838 453 aa15.38■□□□□ 0.05
C1orf43-206ENST00000368521 ADRA1BP35368 520 aa15.38■□□□□ 0.05
C1orf43-206ENST00000368521 CCNFP41002 786 aa15.38■□□□□ 0.05
C1orf43-206ENST00000368521 ETV4P43268 484 aa15.38■□□□□ 0.05
C1orf43-206ENST00000368521 TKTL1P51854 596 aa15.38■□□□□ 0.05
C1orf43-206ENST00000368521 ATXN1P54253 815 aaKnown RBP15.38■□□□□ 0.05
C1orf43-206ENST00000368521 SEPT7Q16181 437 aaKnown RBP15.38■□□□□ 0.05
C1orf43-206ENST00000368521 PARP6Q2NL67 630 aa15.38■□□□□ 0.05
C1orf43-206ENST00000368521 GNASQ5JWF2 1037 aa15.38■□□□□ 0.05
C1orf43-206ENST00000368521 ANKRD20A2Q5SQ80 823 aa15.38■□□□□ 0.05
C1orf43-206ENST00000368521 ANKRD20A1Q5TYW2 823 aa15.38■□□□□ 0.05
C1orf43-206ENST00000368521 ANKRD20A3Q5VUR7 823 aa15.38■□□□□ 0.05
C1orf43-206ENST00000368521 LRRC8BQ6P9F7 803 aa15.38■□□□□ 0.05
C1orf43-206ENST00000368521 TIFABQ6ZNK6 161 aa15.38■□□□□ 0.05
C1orf43-206ENST00000368521 SAPCD2Q86UD0 394 aa15.38■□□□□ 0.05
C1orf43-206ENST00000368521 FAM35AQ86V20 835 aa15.38■□□□□ 0.05
C1orf43-206ENST00000368521 FAM149B1Q96BN6 582 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms