RNA–Protein interactions for RNA: ENST00000368378.7

THBS3-201, Transcript of thrombospondin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THBS3, Length 3,145 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-201ENST00000368378 KCNK13Q9HB14 408 aa9.18□□□□□ -0.94
THBS3-201ENST00000368378 PAPOLBQ9NRJ5 636 aaKnown RBP9.18□□□□□ -0.94
THBS3-201ENST00000368378 ACTL7BQ9Y614 415 aa9.18□□□□□ -0.94
THBS3-201ENST00000368378 ARID2Q68CP9 1835 aa9.18□□□□□ -0.94
THBS3-201ENST00000368378 SPECC1L-ADORA2AF8WAN1 911 aa9.17□□□□□ -0.94
THBS3-201ENST00000368378 PEX1O43933 1283 aa9.17□□□□□ -0.94
THBS3-201ENST00000368378 LUC7L3O95232 432 aaKnown RBP9.17□□□□□ -0.94
THBS3-201ENST00000368378 DLDP09622 509 aaKnown RBP9.17□□□□□ -0.94
THBS3-201ENST00000368378 SKIP12755 728 aa9.17□□□□□ -0.94
THBS3-201ENST00000368378 GNAZP19086 355 aa9.17□□□□□ -0.94
THBS3-201ENST00000368378 ATP6V1C1P21283 382 aa9.17□□□□□ -0.94
THBS3-201ENST00000368378 SP100P23497 879 aaPredicted RBP9.17□□□□□ -0.94
THBS3-201ENST00000368378 BDNFP23560 247 aa9.17□□□□□ -0.94
THBS3-201ENST00000368378 SDC4P31431 198 aa9.17□□□□□ -0.94
THBS3-201ENST00000368378 ARL2P36404 184 aa9.17□□□□□ -0.94
THBS3-201ENST00000368378 MAP3K10Q02779 954 aa9.17□□□□□ -0.94
THBS3-201ENST00000368378 ASPHQ12797 758 aa9.17□□□□□ -0.94
THBS3-201ENST00000368378 STX3Q13277 289 aa9.17□□□□□ -0.94
THBS3-201ENST00000368378 FASTKD1Q53R41 847 aaKnown RBP9.17□□□□□ -0.94
THBS3-201ENST00000368378 PPP1R26Q5T8A7 1209 aaPredicted RBP9.17□□□□□ -0.94
THBS3-201ENST00000368378 RAPH1Q70E73 1250 aa9.17□□□□□ -0.94
THBS3-201ENST00000368378 SCUBE1Q8IWY4 988 aa9.17□□□□□ -0.94
THBS3-201ENST00000368378 GALNT4Q8N4A0 578 aa9.17□□□□□ -0.94
THBS3-201ENST00000368378 FAM156AQ8NDB6 213 aa9.17□□□□□ -0.94
THBS3-201ENST00000368378 PPP4R1Q8TF05 950 aa9.17□□□□□ -0.94
THBS3-201ENST00000368378 SH3TC2Q8TF17 1288 aa9.17□□□□□ -0.94
THBS3-201ENST00000368378 TRIM4Q9C037 500 aa9.17□□□□□ -0.94
THBS3-201ENST00000368378 TSPYL2Q9H2G4 693 aaPredicted RBP9.17□□□□□ -0.94
THBS3-201ENST00000368378 DPEP3Q9H4B8 488 aa9.17□□□□□ -0.94
THBS3-201ENST00000368378 DDX56Q9NY93 547 aaKnown RBP9.17□□□□□ -0.94
THBS3-201ENST00000368378 SLC24A2Q9UI40 661 aa9.17□□□□□ -0.94
THBS3-201ENST00000368378 TRIP11Q15643 1979 aa9.17□□□□□ -0.94
THBS3-201ENST00000368378 XIRP2A4UGR9 3374 aa9.17□□□□□ -0.94
THBS3-201ENST00000368378 FER1L6Q2WGJ9 1857 aa9.17□□□□□ -0.94
THBS3-201ENST00000368378 A6NJR5 290 aa9.17□□□□□ -0.94
THBS3-201ENST00000368378 SPDYE16A6NNV3 312 aaPredicted RBP9.17□□□□□ -0.94
THBS3-201ENST00000368378 MSCO60682 206 aa9.17□□□□□ -0.94
THBS3-201ENST00000368378 TRUB2O95900 331 aaKnown RBP9.17□□□□□ -0.94
THBS3-201ENST00000368378 AMHP03971 560 aa9.17□□□□□ -0.94
THBS3-201ENST00000368378 SNRPAP09012 282 aaKnown RBP9.17□□□□□ -0.94
THBS3-201ENST00000368378 HOXC6P09630 235 aa9.17□□□□□ -0.94
THBS3-201ENST00000368378 ARSAP15289 507 aa9.17□□□□□ -0.94
THBS3-201ENST00000368378 MGAT1P26572 445 aa9.17□□□□□ -0.94
THBS3-201ENST00000368378 EPHX2P34913 555 aa9.17□□□□□ -0.94
THBS3-201ENST00000368378 PITX1P78337 314 aaPredicted RBP9.17□□□□□ -0.94
THBS3-201ENST00000368378 MCL1Q07820 350 aa9.17□□□□□ -0.94
THBS3-201ENST00000368378 TRIP10Q15642 601 aa9.17□□□□□ -0.94
THBS3-201ENST00000368378 PPP1R15BQ5SWA1 713 aa9.17□□□□□ -0.94
THBS3-201ENST00000368378 XRRA1Q6P2D8 792 aa9.17□□□□□ -0.94
THBS3-201ENST00000368378 KCNT2Q6UVM3 1135 aa9.17□□□□□ -0.94
THBS3-201ENST00000368378 UNC5AQ6ZN44 842 aa9.17□□□□□ -0.94
THBS3-201ENST00000368378 CEP128Q6ZU80 1094 aa9.17□□□□□ -0.94
THBS3-201ENST00000368378 SDCCAG8Q86SQ7 713 aaPredicted RBP9.17□□□□□ -0.94
THBS3-201ENST00000368378 ZBTB46Q86UZ6 589 aa9.17□□□□□ -0.94
THBS3-201ENST00000368378 RASSF3Q86WH2 238 aa9.17□□□□□ -0.94
THBS3-201ENST00000368378 HPS6Q86YV9 775 aa9.17□□□□□ -0.94
THBS3-201ENST00000368378 RNF135Q8IUD6 432 aa9.17□□□□□ -0.94
THBS3-201ENST00000368378 SLC4A11Q8NBS3 891 aa9.17□□□□□ -0.94
THBS3-201ENST00000368378 NMD3Q96D46 503 aaKnown RBP9.17□□□□□ -0.94
THBS3-201ENST00000368378 ACO2Q99798 780 aaKnown RBP9.17□□□□□ -0.94
THBS3-201ENST00000368378 SNRNP25Q9BV90 132 aaKnown RBP9.17□□□□□ -0.94
THBS3-201ENST00000368378 ELP3Q9H9T3 547 aa9.17□□□□□ -0.94
THBS3-201ENST00000368378 FARP1Q9Y4F1 1045 aaPredicted RBP9.17□□□□□ -0.94
THBS3-201ENST00000368378 EVPLQ92817 2033 aa9.17□□□□□ -0.94
THBS3-201ENST00000368378 PRRC2BQ5JSZ5 2229 aaKnown RBP9.16□□□□□ -0.94
THBS3-201ENST00000368378 APOC4-APOC2K7ER74 178 aa9.16□□□□□ -0.94
THBS3-201ENST00000368378 APOL1O14791 398 aa9.16□□□□□ -0.94
THBS3-201ENST00000368378 PAPSS1O43252 624 aaPredicted RBP9.16□□□□□ -0.94
THBS3-201ENST00000368378 ATP5HO75947 161 aa9.16□□□□□ -0.94
THBS3-201ENST00000368378 APOC2P02655 101 aa9.16□□□□□ -0.94
THBS3-201ENST00000368378 GOT1P17174 413 aa9.16□□□□□ -0.94
THBS3-201ENST00000368378 GPD1P21695 349 aa9.16□□□□□ -0.94
THBS3-201ENST00000368378 TYK2P29597 1187 aa9.16□□□□□ -0.94
THBS3-201ENST00000368378 PKNOX1P55347 436 aa9.16□□□□□ -0.94
THBS3-201ENST00000368378 MRPS5P82675 430 aaKnown RBP9.16□□□□□ -0.94
THBS3-201ENST00000368378 ACVR2BQ13705 512 aa9.16□□□□□ -0.94
THBS3-201ENST00000368378 CTC1Q2NKJ3 1217 aa9.16□□□□□ -0.94
THBS3-201ENST00000368378 ZNF618Q5T7W0 954 aa9.16□□□□□ -0.94
THBS3-201ENST00000368378 SLC30A9Q6PML9 568 aa9.16□□□□□ -0.94
THBS3-201ENST00000368378 PAOXQ6QHF9 649 aa9.16□□□□□ -0.94
THBS3-201ENST00000368378 BBS12Q6ZW61 710 aa9.16□□□□□ -0.94
THBS3-201ENST00000368378 SLC26A11Q86WA9 606 aa9.16□□□□□ -0.94
THBS3-201ENST00000368378 RELL1Q8IUW5 271 aa9.16□□□□□ -0.94
THBS3-201ENST00000368378 MTMR14Q8NCE2 650 aa9.16□□□□□ -0.94
THBS3-201ENST00000368378 TMEM176AQ96HP8 235 aa9.16□□□□□ -0.94
THBS3-201ENST00000368378 PANX3Q96QZ0 392 aa9.16□□□□□ -0.94
THBS3-201ENST00000368378 SPOCK3Q9BQ16 436 aa9.16□□□□□ -0.94
THBS3-201ENST00000368378 KLC2Q9H0B6 622 aa9.16□□□□□ -0.94
THBS3-201ENST00000368378 IRF2BPLQ9H1B7 796 aa9.16□□□□□ -0.94
THBS3-201ENST00000368378 CDT1Q9H211 546 aa9.16□□□□□ -0.94
THBS3-201ENST00000368378 AS3MTQ9HBK9 375 aa9.16□□□□□ -0.94
THBS3-201ENST00000368378 ASNSD1Q9NWL6 643 aa9.16□□□□□ -0.94
THBS3-201ENST00000368378 NDE1Q9NXR1 346 aa9.16□□□□□ -0.94
THBS3-201ENST00000368378 SENP1Q9P0U3 644 aa9.16□□□□□ -0.94
THBS3-201ENST00000368378 SLC7A8Q9UHI5 535 aa9.16□□□□□ -0.94
THBS3-201ENST00000368378 SIX4Q9UIU6 781 aa9.16□□□□□ -0.94
THBS3-201ENST00000368378 MAFBQ9Y5Q3 323 aaPredicted RBP9.16□□□□□ -0.94
THBS3-201ENST00000368378 STYXL1Q9Y6J8 313 aa9.16□□□□□ -0.94
THBS3-201ENST00000368378 CDH23Q9H251 3354 aa9.16□□□□□ -0.94
THBS3-201ENST00000368378 C3orf70A6NLC5 250 aaPredicted RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms