RNA–Protein interactions for RNA: ENST00000368289.6

ECHDC1-202, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5 BASIC

Gene ECHDC1, Length 909 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-202ENST00000368289 C7orf31Q8N865 590 aa6.88□□□□□ -1.31
ECHDC1-202ENST00000368289 ETNPPLQ8TBG4 499 aa6.88□□□□□ -1.31
ECHDC1-202ENST00000368289 CAPZA3Q96KX2 299 aa6.88□□□□□ -1.31
ECHDC1-202ENST00000368289 FAM81BQ96LP2 452 aa6.88□□□□□ -1.31
ECHDC1-202ENST00000368289 HSPA12BQ96MM6 686 aa6.88□□□□□ -1.31
ECHDC1-202ENST00000368289 SPAG5Q96R06 1193 aa6.88□□□□□ -1.31
ECHDC1-202ENST00000368289 IWS1Q96ST2 819 aa6.88□□□□□ -1.31
ECHDC1-202ENST00000368289 LRRC1Q9BTT6 524 aa6.88□□□□□ -1.31
ECHDC1-202ENST00000368289 DDX23Q9BUQ8 820 aaKnown RBP6.88□□□□□ -1.31
ECHDC1-202ENST00000368289 GANQ9H2C0 597 aa6.88□□□□□ -1.31
ECHDC1-202ENST00000368289 ARHGEF3Q9NR81 526 aa6.88□□□□□ -1.31
ECHDC1-202ENST00000368289 SUCLA2Q9P2R7 463 aaPredicted RBP6.88□□□□□ -1.31
ECHDC1-202ENST00000368289 TRIM10Q9UDY6 481 aa6.88□□□□□ -1.31
ECHDC1-202ENST00000368289 TMEM59LQ9UK28 342 aa6.88□□□□□ -1.31
ECHDC1-202ENST00000368289 ST14Q9Y5Y6 855 aa6.88□□□□□ -1.31
ECHDC1-202ENST00000368289 SCO2A0A1W2PP80 73 aa6.87□□□□□ -1.31
ECHDC1-202ENST00000368289 GOLGA6L10A6NI86 522 aa6.87□□□□□ -1.31
ECHDC1-202ENST00000368289 EBAG9O00559 213 aa6.87□□□□□ -1.31
ECHDC1-202ENST00000368289 MEIS2O14770 477 aa6.87□□□□□ -1.31
ECHDC1-202ENST00000368289 NKRFO15226 690 aaKnown RBP eCLIP6.87□□□□□ -1.31
ECHDC1-202ENST00000368289 LAMTOR5O43504 91 aa6.87□□□□□ -1.31
ECHDC1-202ENST00000368289 SRGAP2O75044 1071 aa6.87□□□□□ -1.31
ECHDC1-202ENST00000368289 ERLIN2O94905 339 aa6.87□□□□□ -1.31
ECHDC1-202ENST00000368289 MOCS3O95396 460 aa6.87□□□□□ -1.31
ECHDC1-202ENST00000368289 WNT11O96014 354 aa6.87□□□□□ -1.31
ECHDC1-202ENST00000368289 TP53P04637 393 aaPredicted RBP6.87□□□□□ -1.31
ECHDC1-202ENST00000368289 H2AFZP0C0S5 128 aa6.87□□□□□ -1.31
ECHDC1-202ENST00000368289 ALAS1P13196 640 aa6.87□□□□□ -1.31
ECHDC1-202ENST00000368289 UCHL3P15374 230 aa6.87□□□□□ -1.31
ECHDC1-202ENST00000368289 PSMC2P35998 433 aaKnown RBP6.87□□□□□ -1.31
ECHDC1-202ENST00000368289 MAGEA9P43362 315 aa6.87□□□□□ -1.31
ECHDC1-202ENST00000368289 KLK7P49862 253 aa6.87□□□□□ -1.31
ECHDC1-202ENST00000368289 ZNF143P52747 638 aaPredicted RBP6.87□□□□□ -1.31
ECHDC1-202ENST00000368289 DRG2P55039 364 aaKnown RBP6.87□□□□□ -1.31
ECHDC1-202ENST00000368289 HADHBP55084 474 aaKnown RBP6.87□□□□□ -1.31
ECHDC1-202ENST00000368289 EIF3BP55884 814 aaKnown RBP6.87□□□□□ -1.31
ECHDC1-202ENST00000368289 UBE3AQ05086 875 aa6.87□□□□□ -1.31
ECHDC1-202ENST00000368289 GFPT1Q06210 699 aaPredicted RBP6.87□□□□□ -1.31
ECHDC1-202ENST00000368289 SPIRE1Q08AE8 756 aa6.87□□□□□ -1.31
ECHDC1-202ENST00000368289 PPP2R5CQ13362 524 aa6.87□□□□□ -1.31
ECHDC1-202ENST00000368289 BIRC3Q13489 604 aa6.87□□□□□ -1.31
ECHDC1-202ENST00000368289 LPIN1Q14693 890 aa6.87□□□□□ -1.31
ECHDC1-202ENST00000368289 STPG1Q5TH74 334 aa6.87□□□□□ -1.31
ECHDC1-202ENST00000368289 SYDE2Q5VT97 1194 aa6.87□□□□□ -1.31
ECHDC1-202ENST00000368289 IL31Q6EBC2 164 aa6.87□□□□□ -1.31
ECHDC1-202ENST00000368289 CES5AQ6NT32 575 aa6.87□□□□□ -1.31
ECHDC1-202ENST00000368289 H2AFVQ71UI9 128 aa6.87□□□□□ -1.31
ECHDC1-202ENST00000368289 NIPA1Q7RTP0 329 aa6.87□□□□□ -1.31
ECHDC1-202ENST00000368289 IRF2BP2Q7Z5L9 587 aa6.87□□□□□ -1.31
ECHDC1-202ENST00000368289 YTHDF3Q7Z739 585 aaKnown RBP6.87□□□□□ -1.31
ECHDC1-202ENST00000368289 FAM160B2Q86V87 743 aa6.87□□□□□ -1.31
ECHDC1-202ENST00000368289 CATSPER3Q86XQ3 398 aa6.87□□□□□ -1.31
ECHDC1-202ENST00000368289 C12orf56Q8IXR9 622 aa6.87□□□□□ -1.31
ECHDC1-202ENST00000368289 IQCKQ8N0W5 287 aa6.87□□□□□ -1.31
ECHDC1-202ENST00000368289 RASGEF1CQ8N431 466 aa6.87□□□□□ -1.31
ECHDC1-202ENST00000368289 SCFD2Q8WU76 684 aa6.87□□□□□ -1.31
ECHDC1-202ENST00000368289 CHURC1Q8WUH1 139 aa6.87□□□□□ -1.31
ECHDC1-202ENST00000368289 TBC1D5Q92609 795 aa6.87□□□□□ -1.31
ECHDC1-202ENST00000368289 RPP25Q9BUL9 199 aaKnown RBP6.87□□□□□ -1.31
ECHDC1-202ENST00000368289 CAPS2Q9BXY5 557 aa6.87□□□□□ -1.31
ECHDC1-202ENST00000368289 STK33Q9BYT3 514 aa6.87□□□□□ -1.31
ECHDC1-202ENST00000368289 ISCUQ9H1K1 167 aa6.87□□□□□ -1.31
ECHDC1-202ENST00000368289 TMEM206Q9H813 350 aa6.87□□□□□ -1.31
ECHDC1-202ENST00000368289 AGO3Q9H9G7 860 aaKnown RBP6.87□□□□□ -1.31
ECHDC1-202ENST00000368289 FAM114A2Q9NRY5 505 aa6.87□□□□□ -1.31
ECHDC1-202ENST00000368289 DBR1Q9UK59 544 aaKnown RBP6.87□□□□□ -1.31
ECHDC1-202ENST00000368289 KLK13Q9UKR3 277 aa6.87□□□□□ -1.31
ECHDC1-202ENST00000368289 PCNX2A6NKB5 2137 aa6.86□□□□□ -1.31
ECHDC1-202ENST00000368289 A0A087WUV0 522 aaPredicted RBP6.86□□□□□ -1.31
ECHDC1-202ENST00000368289 C2orf71A6NGG8 1288 aa6.86□□□□□ -1.31
ECHDC1-202ENST00000368289 MIF4GDA9UHW6 222 aaKnown RBP6.86□□□□□ -1.31
ECHDC1-202ENST00000368289 C9IYK1 514 aa6.86□□□□□ -1.31
ECHDC1-202ENST00000368289 E9PMD0 336 aa6.86□□□□□ -1.31
ECHDC1-202ENST00000368289 H3BS24 57 aa6.86□□□□□ -1.31
ECHDC1-202ENST00000368289 PYCARD-AS1I3L0S3 204 aa6.86□□□□□ -1.31
ECHDC1-202ENST00000368289 AGPSO00116 658 aa6.86□□□□□ -1.31
ECHDC1-202ENST00000368289 MYO1CO00159 1063 aa6.86□□□□□ -1.31
ECHDC1-202ENST00000368289 PGRMC1O00264 195 aaKnown RBP6.86□□□□□ -1.31
ECHDC1-202ENST00000368289 NFIBO00712 420 aa6.86□□□□□ -1.31
ECHDC1-202ENST00000368289 KLF4O43474 513 aa6.86□□□□□ -1.31
ECHDC1-202ENST00000368289 PPP1R11O60927 126 aaPredicted RBP6.86□□□□□ -1.31
ECHDC1-202ENST00000368289 PALMO75781 387 aa6.86□□□□□ -1.31
ECHDC1-202ENST00000368289 GGPS1O95749 300 aa6.86□□□□□ -1.31
ECHDC1-202ENST00000368289 NR3C1P04150 777 aa6.86□□□□□ -1.31
ECHDC1-202ENST00000368289 PLEKP08567 350 aaPredicted RBP6.86□□□□□ -1.31
ECHDC1-202ENST00000368289 TMEM253P0C7T8 217 aa6.86□□□□□ -1.31
ECHDC1-202ENST00000368289 MYBP10242 640 aa6.86□□□□□ -1.31
ECHDC1-202ENST00000368289 GHRP10912 638 aa6.86□□□□□ -1.31
ECHDC1-202ENST00000368289 SRFP11831 508 aa6.86□□□□□ -1.31
ECHDC1-202ENST00000368289 EPCAMP16422 314 aa6.86□□□□□ -1.31
ECHDC1-202ENST00000368289 CD72P21854 359 aa6.86□□□□□ -1.31
ECHDC1-202ENST00000368289 PON1P27169 355 aa6.86□□□□□ -1.31
ECHDC1-202ENST00000368289 HSPA9P38646 679 aaKnown RBP6.86□□□□□ -1.31
ECHDC1-202ENST00000368289 USP8P40818 1118 aa6.86□□□□□ -1.31
ECHDC1-202ENST00000368289 ZNF131P52739 623 aa6.86□□□□□ -1.31
ECHDC1-202ENST00000368289 JAM2P57087 298 aa6.86□□□□□ -1.31
ECHDC1-202ENST00000368289 ADAM17P78536 824 aa6.86□□□□□ -1.31
ECHDC1-202ENST00000368289 C2orf54Q08AI8 447 aa6.86□□□□□ -1.31
ECHDC1-202ENST00000368289 MGAT3Q09327 533 aa6.86□□□□□ -1.31
ECHDC1-202ENST00000368289 RAPGEF1Q13905 1077 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms