RNA–Protein interactions for RNA: ENST00000368213.9

PTPRK-205, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-205ENST00000368213 RAD18Q9NS91 495 aa11.06□□□□□ -0.64
PTPRK-205ENST00000368213 ZNF510Q9Y2H8 683 aa11.06□□□□□ -0.64
PTPRK-205ENST00000368213 IFT172Q9UG01 1749 aa11.06□□□□□ -0.64
PTPRK-205ENST00000368213 E5RJQ4 531 aa11.06□□□□□ -0.64
PTPRK-205ENST00000368213 ATP8B1O43520 1251 aa11.06□□□□□ -0.64
PTPRK-205ENST00000368213 ARF4P18085 180 aaPredicted RBP11.06□□□□□ -0.64
PTPRK-205ENST00000368213 KRT4P19013 534 aa11.06□□□□□ -0.64
PTPRK-205ENST00000368213 CAPZA2P47755 286 aa11.06□□□□□ -0.64
PTPRK-205ENST00000368213 TCEA2Q15560 299 aa11.06□□□□□ -0.64
PTPRK-205ENST00000368213 UGCGQ16739 394 aa11.06□□□□□ -0.64
PTPRK-205ENST00000368213 INSCQ1MX18 579 aa11.06□□□□□ -0.64
PTPRK-205ENST00000368213 DBF4BQ8NFT6 615 aa11.06□□□□□ -0.64
PTPRK-205ENST00000368213 MIPOL1Q8TD10 442 aa11.06□□□□□ -0.64
PTPRK-205ENST00000368213 SERAC1Q96JX3 654 aa11.06□□□□□ -0.64
PTPRK-205ENST00000368213 MTMR9Q96QG7 549 aa11.06□□□□□ -0.64
PTPRK-205ENST00000368213 ELAC2Q9BQ52 826 aaKnown RBP11.06□□□□□ -0.64
PTPRK-205ENST00000368213 SOHLH2Q9NX45 425 aa11.06□□□□□ -0.64
PTPRK-205ENST00000368213 TRDMT1O14717 391 aaKnown RBP11.06□□□□□ -0.64
PTPRK-205ENST00000368213 ZNF185O15231 689 aa11.06□□□□□ -0.64
PTPRK-205ENST00000368213 GYPCP04921 128 aa11.06□□□□□ -0.64
PTPRK-205ENST00000368213 EEF1B2P24534 225 aaKnown RBP11.06□□□□□ -0.64
PTPRK-205ENST00000368213 HTR1BP28222 390 aa11.06□□□□□ -0.64
PTPRK-205ENST00000368213 KRT20P35900 424 aa11.06□□□□□ -0.64
PTPRK-205ENST00000368213 TNFSF9P41273 254 aa11.06□□□□□ -0.64
PTPRK-205ENST00000368213 MARSP56192 900 aaKnown RBP11.06□□□□□ -0.64
PTPRK-205ENST00000368213 BTKQ06187 659 aa11.06□□□□□ -0.64
PTPRK-205ENST00000368213 ZC3H12AQ5D1E8 599 aaKnown RBP11.06□□□□□ -0.64
PTPRK-205ENST00000368213 EFL1Q7Z2Z2 1120 aaKnown RBP11.06□□□□□ -0.64
PTPRK-205ENST00000368213 SPPL2BQ8TCT7 592 aa11.06□□□□□ -0.64
PTPRK-205ENST00000368213 CACNA2D2Q9NY47 1150 aa11.06□□□□□ -0.64
PTPRK-205ENST00000368213 PSMC3IPQ9P2W1 217 aaPredicted RBP11.06□□□□□ -0.64
PTPRK-205ENST00000368213 OPLAHO14841 1288 aa11.05□□□□□ -0.64
PTPRK-205ENST00000368213 EVX2Q03828 476 aa11.05□□□□□ -0.64
PTPRK-205ENST00000368213 AGAP9Q5VTM2 703 aa11.05□□□□□ -0.64
PTPRK-205ENST00000368213 ABHD15Q6UXT9 468 aa11.05□□□□□ -0.64
PTPRK-205ENST00000368213 SPOCD1Q6ZMY3 1216 aa11.05□□□□□ -0.64
PTPRK-205ENST00000368213 SH3BP5LQ7L8J4 393 aa11.05□□□□□ -0.64
PTPRK-205ENST00000368213 TBCBQ99426 244 aa11.05□□□□□ -0.64
PTPRK-205ENST00000368213 MAF1Q9H063 256 aa11.05□□□□□ -0.64
PTPRK-205ENST00000368213 ZCWPW1Q9H0M4 648 aa11.05□□□□□ -0.64
PTPRK-205ENST00000368213 CFAP97Q9P2B7 532 aa11.05□□□□□ -0.64
PTPRK-205ENST00000368213 GTPBP10A4D1E9 387 aaKnown RBP11.05□□□□□ -0.64
PTPRK-205ENST00000368213 NEDD8-MDP1E9PL57 170 aa11.05□□□□□ -0.64
PTPRK-205ENST00000368213 PROSCO94903 275 aa11.05□□□□□ -0.64
PTPRK-205ENST00000368213 NFATC1O95644 943 aa11.05□□□□□ -0.64
PTPRK-205ENST00000368213 PCNAP12004 261 aa11.05□□□□□ -0.64
PTPRK-205ENST00000368213 ITGB6P18564 788 aa11.05□□□□□ -0.64
PTPRK-205ENST00000368213 ARFIP2P53365 341 aa11.05□□□□□ -0.64
PTPRK-205ENST00000368213 ITGA8P53708 1063 aa11.05□□□□□ -0.64
PTPRK-205ENST00000368213 ITGB3BPQ13352 177 aaPredicted RBP11.05□□□□□ -0.64
PTPRK-205ENST00000368213 BOP1Q14137 746 aaKnown RBP11.05□□□□□ -0.64
PTPRK-205ENST00000368213 UBXN2BQ14CS0 331 aa11.05□□□□□ -0.64
PTPRK-205ENST00000368213 TRAPPC5Q8IUR0 188 aa11.05□□□□□ -0.64
PTPRK-205ENST00000368213 TPCN2Q8NHX9 752 aa11.05□□□□□ -0.64
PTPRK-205ENST00000368213 COG1Q8WTW3 980 aa11.05□□□□□ -0.64
PTPRK-205ENST00000368213 PIK3R5Q8WYR1 880 aa11.05□□□□□ -0.64
PTPRK-205ENST00000368213 FOXP3Q9BZS1 431 aa11.05□□□□□ -0.64
PTPRK-205ENST00000368213 MRPL46Q9H2W6 279 aaKnown RBP11.05□□□□□ -0.64
PTPRK-205ENST00000368213 VPS51Q9UID3 782 aa11.05□□□□□ -0.64
PTPRK-205ENST00000368213 DTNAQ9Y4J8 743 aa11.05□□□□□ -0.64
PTPRK-205ENST00000368213 TLL2Q9Y6L7 1015 aa11.05□□□□□ -0.64
PTPRK-205ENST00000368213 SOWAHBA6NEL2 793 aa11.05□□□□□ -0.64
PTPRK-205ENST00000368213 SDR42E2A6NKP2 422 aa11.05□□□□□ -0.64
PTPRK-205ENST00000368213 PDE2AO00408 941 aaPredicted RBP11.05□□□□□ -0.64
PTPRK-205ENST00000368213 OR56A5P0C7T3 313 aa11.05□□□□□ -0.64
PTPRK-205ENST00000368213 TTC39BQ5VTQ0 682 aaPredicted RBP11.05□□□□□ -0.64
PTPRK-205ENST00000368213 MARK2Q7KZI7 788 aaKnown RBP11.05□□□□□ -0.64
PTPRK-205ENST00000368213 GLT6D1Q7Z4J2 308 aa11.05□□□□□ -0.64
PTPRK-205ENST00000368213 PTAR1Q7Z6K3 402 aaPredicted RBP11.05□□□□□ -0.64
PTPRK-205ENST00000368213 JAMLQ86YT9 394 aa11.05□□□□□ -0.64
PTPRK-205ENST00000368213 FBXL16Q8N461 479 aa11.05□□□□□ -0.64
PTPRK-205ENST00000368213 TMCO5AQ8N6Q1 288 aa11.05□□□□□ -0.64
PTPRK-205ENST00000368213 TDRD5Q8NAT2 981 aaKnown RBP11.05□□□□□ -0.64
PTPRK-205ENST00000368213 KIAA0895Q8NCT3 520 aa11.05□□□□□ -0.64
PTPRK-205ENST00000368213 MCRS1Q96EZ8 462 aa11.05□□□□□ -0.64
PTPRK-205ENST00000368213 LRRC40Q9H9A6 602 aa11.05□□□□□ -0.64
PTPRK-205ENST00000368213 IARS2Q9NSE4 1012 aaKnown RBP11.05□□□□□ -0.64
PTPRK-205ENST00000368213 CNTNAP1P78357 1384 aa11.05□□□□□ -0.64
PTPRK-205ENST00000368213 SNRPAP09012 282 aaKnown RBP11.05□□□□□ -0.64
PTPRK-205ENST00000368213 HPGDP15428 266 aa11.05□□□□□ -0.64
PTPRK-205ENST00000368213 CCND3P30281 292 aaPredicted RBP11.05□□□□□ -0.64
PTPRK-205ENST00000368213 GPC1P35052 558 aa11.05□□□□□ -0.64
PTPRK-205ENST00000368213 CBWD3Q5JTY5 395 aa11.05□□□□□ -0.64
PTPRK-205ENST00000368213 CBWD5Q5RIA9 395 aa11.05□□□□□ -0.64
PTPRK-205ENST00000368213 EEF1DP3Q658K8 133 aa11.05□□□□□ -0.64
PTPRK-205ENST00000368213 TRIM68Q6AZZ1 485 aa11.05□□□□□ -0.64
PTPRK-205ENST00000368213 SLC13A5Q86YT5 568 aaPredicted RBP11.05□□□□□ -0.64
PTPRK-205ENST00000368213 TMEM161BQ8NDZ6 487 aa11.05□□□□□ -0.64
PTPRK-205ENST00000368213 SGF29Q96ES7 293 aa11.05□□□□□ -0.64
PTPRK-205ENST00000368213 AGXT2Q9BYV1 514 aa11.05□□□□□ -0.64
PTPRK-205ENST00000368213 CHCHD3Q9NX63 227 aaKnown RBP11.05□□□□□ -0.64
PTPRK-205ENST00000368213 TRIM10Q9UDY6 481 aa11.05□□□□□ -0.64
PTPRK-205ENST00000368213 IRS2Q9Y4H2 1338 aa11.05□□□□□ -0.64
PTPRK-205ENST00000368213 TLR5O60602 858 aa11.04□□□□□ -0.64
PTPRK-205ENST00000368213 TRUB2O95900 331 aaKnown RBP11.04□□□□□ -0.64
PTPRK-205ENST00000368213 MAGEA4P43358 317 aa11.04□□□□□ -0.64
PTPRK-205ENST00000368213 MMP13P45452 471 aa11.04□□□□□ -0.64
PTPRK-205ENST00000368213 GRAMD4Q6IC98 578 aa11.04□□□□□ -0.64
PTPRK-205ENST00000368213 PATL1Q86TB9 770 aaKnown RBP11.04□□□□□ -0.64
PTPRK-205ENST00000368213 SYTL1Q8IYJ3 562 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms