RNA–Protein interactions for RNA: ENST00000368207.7

PTPRK-203, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5 BASIC

Gene PTPRK, Length 4,758 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-203ENST00000368207 OR1E1P30953 314 aa12.66□□□□□ -0.38
PTPRK-203ENST00000368207 MGAT5Q09328 741 aa12.66□□□□□ -0.38
PTPRK-203ENST00000368207 MMRN1Q13201 1228 aa12.66□□□□□ -0.38
PTPRK-203ENST00000368207 ACAP1Q15027 740 aa12.66□□□□□ -0.38
PTPRK-203ENST00000368207 PPTC7Q8NI37 304 aa12.66□□□□□ -0.38
PTPRK-203ENST00000368207 WNT8BQ93098 351 aa12.66□□□□□ -0.38
PTPRK-203ENST00000368207 HSD3B7Q9H2F3 369 aa12.66□□□□□ -0.38
PTPRK-203ENST00000368207 TMEM39AQ9NV64 488 aa12.66□□□□□ -0.38
PTPRK-203ENST00000368207 ZNF446Q9NWS9 450 aa12.66□□□□□ -0.38
PTPRK-203ENST00000368207 CDYLQ9Y232 598 aa12.66□□□□□ -0.38
PTPRK-203ENST00000368207 WDR27A2RRH5 827 aa12.66□□□□□ -0.38
PTPRK-203ENST00000368207 GOLGA8TH3BQL2 631 aa12.66□□□□□ -0.38
PTPRK-203ENST00000368207 EPHB3P54753 998 aa12.66□□□□□ -0.38
PTPRK-203ENST00000368207 POLE2P56282 527 aa12.66□□□□□ -0.38
PTPRK-203ENST00000368207 TAS2R40P59535 323 aa12.66□□□□□ -0.38
PTPRK-203ENST00000368207 RHOAP61586 193 aa12.66□□□□□ -0.38
PTPRK-203ENST00000368207 PDE1CQ14123 709 aaPredicted RBP12.66□□□□□ -0.38
PTPRK-203ENST00000368207 FAM110CQ1W6H9 321 aa12.66□□□□□ -0.38
PTPRK-203ENST00000368207 ADCK2Q7Z695 626 aa12.66□□□□□ -0.38
PTPRK-203ENST00000368207 PALB2Q86YC2 1186 aa12.66□□□□□ -0.38
PTPRK-203ENST00000368207 C18orf25Q96B23 403 aaPredicted RBP12.66□□□□□ -0.38
PTPRK-203ENST00000368207 SNRNP25Q9BV90 132 aaKnown RBP12.66□□□□□ -0.38
PTPRK-203ENST00000368207 MRPL1Q9BYD6 325 aaKnown RBP12.66□□□□□ -0.38
PTPRK-203ENST00000368207 SENP6Q9GZR1 1112 aaPredicted RBP12.66□□□□□ -0.38
PTPRK-203ENST00000368207 IL1RL2Q9HB29 575 aa12.66□□□□□ -0.38
PTPRK-203ENST00000368207 RRN3Q9NYV6 651 aa12.66□□□□□ -0.38
PTPRK-203ENST00000368207 ARHGAP28Q9P2N2 729 aa12.66□□□□□ -0.38
PTPRK-203ENST00000368207 PCDHGB4Q9UN71 923 aa12.66□□□□□ -0.38
PTPRK-203ENST00000368207 TTLL13PA6NNM8 815 aa12.66□□□□□ -0.38
PTPRK-203ENST00000368207 SCAMP3O14828 347 aaKnown RBP12.66□□□□□ -0.38
PTPRK-203ENST00000368207 KLHL2O95198 593 aa12.66□□□□□ -0.38
PTPRK-203ENST00000368207 SERPIND1P05546 499 aa12.66□□□□□ -0.38
PTPRK-203ENST00000368207 BGNP21810 368 aa12.66□□□□□ -0.38
PTPRK-203ENST00000368207 NOS2P35228 1153 aa12.66□□□□□ -0.38
PTPRK-203ENST00000368207 GTF2H3Q13889 308 aa12.66□□□□□ -0.38
PTPRK-203ENST00000368207 TMEM86AQ8N2M4 240 aa12.66□□□□□ -0.38
PTPRK-203ENST00000368207 PGBD3Q8N328 593 aa12.66□□□□□ -0.38
PTPRK-203ENST00000368207 HES6Q96HZ4 224 aa12.66□□□□□ -0.38
PTPRK-203ENST00000368207 ILKAPQ9H0C8 392 aaPredicted RBP12.66□□□□□ -0.38
PTPRK-203ENST00000368207 DHX33Q9H6R0 707 aaKnown RBP12.66□□□□□ -0.38
PTPRK-203ENST00000368207 TRMT6Q9UJA5 497 aaKnown RBP12.66□□□□□ -0.38
PTPRK-203ENST00000368207 CLDN5O00501 218 aa12.66□□□□□ -0.38
PTPRK-203ENST00000368207 SERPINB8P50452 374 aa12.66□□□□□ -0.38
PTPRK-203ENST00000368207 ZNF143P52747 638 aaPredicted RBP12.66□□□□□ -0.38
PTPRK-203ENST00000368207 HIRAP54198 1017 aaPredicted RBP12.66□□□□□ -0.38
PTPRK-203ENST00000368207 DPYSL3Q14195 570 aa12.66□□□□□ -0.38
PTPRK-203ENST00000368207 PKN2Q16513 984 aaKnown RBP12.66□□□□□ -0.38
PTPRK-203ENST00000368207 NBPF20Q3BBV1 942 aa12.66□□□□□ -0.38
PTPRK-203ENST00000368207 AGAP9Q5VTM2 703 aa12.66□□□□□ -0.38
PTPRK-203ENST00000368207 PHF13Q86YI8 300 aaPredicted RBP12.66□□□□□ -0.38
PTPRK-203ENST00000368207 FOPNLQ96NB1 174 aa12.66□□□□□ -0.38
PTPRK-203ENST00000368207 SNED1Q8TER0 1413 aa12.66□□□□□ -0.38
PTPRK-203ENST00000368207 PRR23AA6NEV1 266 aa12.65□□□□□ -0.38
PTPRK-203ENST00000368207 NCF1BA6NI72 391 aaPredicted RBP12.65□□□□□ -0.38
PTPRK-203ENST00000368207 NCF1CA8MVU1 366 aaPredicted RBP12.65□□□□□ -0.38
PTPRK-203ENST00000368207 PRPF4O43172 522 aaKnown RBP eCLIP12.65□□□□□ -0.386e-7■□□□□ 9.8
PTPRK-203ENST00000368207 TRUB2O95900 331 aaKnown RBP12.65□□□□□ -0.38
PTPRK-203ENST00000368207 RALBP11234 206 aa12.65□□□□□ -0.38
PTPRK-203ENST00000368207 NCF1P14598 390 aaPredicted RBP12.65□□□□□ -0.38
PTPRK-203ENST00000368207 SERPINB4P48594 390 aa12.65□□□□□ -0.38
PTPRK-203ENST00000368207 CCL23P55773 120 aa12.65□□□□□ -0.38
PTPRK-203ENST00000368207 FKBP1BP68106 108 aa12.65□□□□□ -0.38
PTPRK-203ENST00000368207 AMPD2Q01433 879 aa12.65□□□□□ -0.38
PTPRK-203ENST00000368207 UNC45BQ8IWX7 931 aa12.65□□□□□ -0.38
PTPRK-203ENST00000368207 MAGEB18Q96M61 343 aa12.65□□□□□ -0.38
PTPRK-203ENST00000368207 SERPINB11Q96P15 392 aa12.65□□□□□ -0.38
PTPRK-203ENST00000368207 ZCWPW1Q9H0M4 648 aa12.65□□□□□ -0.38
PTPRK-203ENST00000368207 XPNPEP1Q9NQW7 623 aa12.65□□□□□ -0.38
PTPRK-203ENST00000368207 ACOT9Q9Y305 439 aa12.65□□□□□ -0.38
PTPRK-203ENST00000368207 ROBO1Q9Y6N7 1651 aa12.65□□□□□ -0.38
PTPRK-203ENST00000368207 HNRNPCL1O60812 293 aaKnown RBP12.65□□□□□ -0.38
PTPRK-203ENST00000368207 DNAL1Q4LDG9 190 aa12.65□□□□□ -0.38
PTPRK-203ENST00000368207 PPP1R26Q5T8A7 1209 aaPredicted RBP12.65□□□□□ -0.38
PTPRK-203ENST00000368207 CNPY4Q8N129 248 aa12.65□□□□□ -0.38
PTPRK-203ENST00000368207 LENG1Q96BZ8 264 aaPredicted RBP12.65□□□□□ -0.38
PTPRK-203ENST00000368207 PWWP2AQ96N64 755 aa12.65□□□□□ -0.38
PTPRK-203ENST00000368207 CIPCQ9C0C6 399 aa12.65□□□□□ -0.38
PTPRK-203ENST00000368207 WRAP73Q9P2S5 460 aaPredicted RBP12.65□□□□□ -0.38
PTPRK-203ENST00000368207 DCDC2Q9UHG0 476 aa12.65□□□□□ -0.38
PTPRK-203ENST00000368207 SYNDIG1LA6NDD5 238 aa12.65□□□□□ -0.38
PTPRK-203ENST00000368207 PIAS1O75925 651 aa12.65□□□□□ -0.38
PTPRK-203ENST00000368207 GRM5P41594 1212 aa12.65□□□□□ -0.38
PTPRK-203ENST00000368207 DEFB115Q30KQ5 88 aa12.65□□□□□ -0.38
PTPRK-203ENST00000368207 ZC3H12AQ5D1E8 599 aaKnown RBP12.65□□□□□ -0.38
PTPRK-203ENST00000368207 NETO2Q8NC67 525 aa12.65□□□□□ -0.38
PTPRK-203ENST00000368207 JOSD2Q8TAC2 188 aa12.65□□□□□ -0.38
PTPRK-203ENST00000368207 HELQQ8TDG4 1101 aa12.65□□□□□ -0.38
PTPRK-203ENST00000368207 CMTM5Q96DZ9 223 aa12.65□□□□□ -0.38
PTPRK-203ENST00000368207 HSFY1Q96LI6 401 aa12.65□□□□□ -0.38
PTPRK-203ENST00000368207 ING2Q9H160 280 aa12.65□□□□□ -0.38
PTPRK-203ENST00000368207 SCUBE2Q9NQ36 999 aa12.65□□□□□ -0.38
PTPRK-203ENST00000368207 CTNNAL1Q9UBT7 734 aa12.65□□□□□ -0.38
PTPRK-203ENST00000368207 OR12D3Q9UGF7 316 aa12.65□□□□□ -0.38
PTPRK-203ENST00000368207 KLRG2A4D1S0 409 aaPredicted RBP12.65□□□□□ -0.39
PTPRK-203ENST00000368207 ELNP15502 786 aa12.65□□□□□ -0.39
PTPRK-203ENST00000368207 CRYBB1P53674 252 aaPredicted RBP12.65□□□□□ -0.39
PTPRK-203ENST00000368207 POU4F1Q01851 419 aa12.65□□□□□ -0.39
PTPRK-203ENST00000368207 CSHL1Q14406 222 aa12.65□□□□□ -0.39
PTPRK-203ENST00000368207 ZNF662Q6ZS27 426 aa12.65□□□□□ -0.39
PTPRK-203ENST00000368207 ST13P4Q8IZP2 240 aaPredicted RBP12.65□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms