RNA–Protein interactions for RNA: ENST00000368069.7

COPA-202, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene COPA, Length 4,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-202ENST00000368069 UBE2OQ9C0C9 1292 aaKnown RBP12.01□□□□□ -0.49
COPA-202ENST00000368069 LRCH1Q9Y2L9 728 aa12.01□□□□□ -0.49
COPA-202ENST00000368069 TIMM13Q9Y5L4 95 aaPredicted RBP12.01□□□□□ -0.49
COPA-202ENST00000368069 ZNF142P52746 1687 aaPredicted RBP12.01□□□□□ -0.49
COPA-202ENST00000368069 A0A096LPK6 155 aa12.01□□□□□ -0.49
COPA-202ENST00000368069 USP12O75317 370 aa12.01□□□□□ -0.49
COPA-202ENST00000368069 GRTP1Q5TC63 336 aa12.01□□□□□ -0.49
COPA-202ENST00000368069 ABHD15Q6UXT9 468 aa12.01□□□□□ -0.49
COPA-202ENST00000368069 LRRN4Q8WUT4 740 aa12.01□□□□□ -0.49
COPA-202ENST00000368069 SNX19Q92543 992 aa12.01□□□□□ -0.49
COPA-202ENST00000368069 JADE3Q92613 823 aa12.01□□□□□ -0.49
COPA-202ENST00000368069 OPTNQ96CV9 577 aa12.01□□□□□ -0.49
COPA-202ENST00000368069 UBXN6Q9BZV1 441 aa12.01□□□□□ -0.49
COPA-202ENST00000368069 KLHL4Q9C0H6 718 aa12.01□□□□□ -0.49
COPA-202ENST00000368069 STX18Q9P2W9 335 aaKnown RBP12.01□□□□□ -0.49
COPA-202ENST00000368069 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.01□□□□□ -0.49
COPA-202ENST00000368069 RIPK3Q9Y572 518 aa12.01□□□□□ -0.49
COPA-202ENST00000368069 ZMYM2Q9UBW7 1377 aa12.01□□□□□ -0.49
COPA-202ENST00000368069 MGEA5O60502 916 aa12.01□□□□□ -0.49
COPA-202ENST00000368069 EDF1O60869 148 aaKnown RBP12.01□□□□□ -0.49
COPA-202ENST00000368069 RHOBTB1O94844 696 aa12.01□□□□□ -0.49
COPA-202ENST00000368069 GJB1P08034 283 aa12.01□□□□□ -0.49
COPA-202ENST00000368069 MLH1P40692 756 aa12.01□□□□□ -0.49
COPA-202ENST00000368069 CACNA2D1P54289 1103 aa12.01□□□□□ -0.49
COPA-202ENST00000368069 HADHBP55084 474 aaKnown RBP12.01□□□□□ -0.49
COPA-202ENST00000368069 OCA2Q04671 838 aa12.01□□□□□ -0.49
COPA-202ENST00000368069 CELF3Q5SZQ8 465 aaKnown RBP12.01□□□□□ -0.49
COPA-202ENST00000368069 GLB1LQ6UWU2 654 aa12.01□□□□□ -0.49
COPA-202ENST00000368069 OTOAQ7RTW8 1153 aa12.01□□□□□ -0.49
COPA-202ENST00000368069 KCNMB4Q86W47 210 aa12.01□□□□□ -0.49
COPA-202ENST00000368069 NT5DC4Q86YG4 428 aa12.01□□□□□ -0.49
COPA-202ENST00000368069 CPNE8Q86YQ8 564 aa12.01□□□□□ -0.49
COPA-202ENST00000368069 RIOX2Q8IUF8 465 aa12.01□□□□□ -0.49
COPA-202ENST00000368069 RFWD2Q8NHY2 731 aa12.01□□□□□ -0.49
COPA-202ENST00000368069 BLOC1S5Q8TDH9 187 aa12.01□□□□□ -0.49
COPA-202ENST00000368069 GCNAQ96QF7 691 aa12.01□□□□□ -0.49
COPA-202ENST00000368069 DDX43Q9NXZ2 648 aaKnown RBP12.01□□□□□ -0.49
COPA-202ENST00000368069 NCAM2O15394 837 aa12□□□□□ -0.49
COPA-202ENST00000368069 TPST1O60507 370 aa12□□□□□ -0.49
COPA-202ENST00000368069 PDE5AO76074 875 aa12□□□□□ -0.49
COPA-202ENST00000368069 TOMM70O94826 608 aa12□□□□□ -0.49
COPA-202ENST00000368069 PTPN7P35236 360 aa12□□□□□ -0.49
COPA-202ENST00000368069 OR1G1P47890 313 aa12□□□□□ -0.49
COPA-202ENST00000368069 CRADDP78560 199 aa12□□□□□ -0.49
COPA-202ENST00000368069 POU6F1Q14863 301 aa12□□□□□ -0.49
COPA-202ENST00000368069 CCDC153Q494R4 210 aa12□□□□□ -0.49
COPA-202ENST00000368069 TCHHL1Q5QJ38 904 aaPredicted RBP12□□□□□ -0.49
COPA-202ENST00000368069 C12orf50Q8NA57 414 aaPredicted RBP12□□□□□ -0.49
COPA-202ENST00000368069 SH3TC2Q8TF17 1288 aa12□□□□□ -0.49
COPA-202ENST00000368069 SYT15Q9BQS2 421 aa12□□□□□ -0.49
COPA-202ENST00000368069 TMEM109Q9BVC6 243 aa12□□□□□ -0.49
COPA-202ENST00000368069 OSBPL7Q9BZF2 842 aa12□□□□□ -0.49
COPA-202ENST00000368069 GID8Q9NWU2 228 aa12□□□□□ -0.49
COPA-202ENST00000368069 CD274Q9NZQ7 290 aa12□□□□□ -0.49
COPA-202ENST00000368069 PRG3Q9Y2Y8 225 aaPredicted RBP12□□□□□ -0.49
COPA-202ENST00000368069 TRIM13O60858 407 aa12□□□□□ -0.49
COPA-202ENST00000368069 ENTPD5O75356 428 aa12□□□□□ -0.49
COPA-202ENST00000368069 C4BPAP04003 597 aaKnown RBP12□□□□□ -0.49
COPA-202ENST00000368069 LGALS2P05162 132 aa12□□□□□ -0.49
COPA-202ENST00000368069 MPOP05164 745 aa12□□□□□ -0.49
COPA-202ENST00000368069 RECQLP46063 649 aaPredicted RBP12□□□□□ -0.49
COPA-202ENST00000368069 XRCC4Q13426 336 aa12□□□□□ -0.49
COPA-202ENST00000368069 CSHL1Q14406 222 aa12□□□□□ -0.49
COPA-202ENST00000368069 MAPRE1Q15691 268 aaKnown RBP12□□□□□ -0.49
COPA-202ENST00000368069 PTPN20Q4JDL3 420 aa12□□□□□ -0.49
COPA-202ENST00000368069 ZC3H12AQ5D1E8 599 aaKnown RBP12□□□□□ -0.49
COPA-202ENST00000368069 C10orf120Q5SQS8 335 aa12□□□□□ -0.49
COPA-202ENST00000368069 KYAT3Q6YP21 454 aaKnown RBP12□□□□□ -0.49
COPA-202ENST00000368069 PLEKHH3Q7Z736 793 aa12□□□□□ -0.49
COPA-202ENST00000368069 CNDP1Q96KN2 507 aa12□□□□□ -0.49
COPA-202ENST00000368069 XPNPEP3Q9NQH7 507 aa12□□□□□ -0.49
COPA-202ENST00000368069 PKD2L2Q9NZM6 624 aa12□□□□□ -0.49
COPA-202ENST00000368069 YDJCA8MPS7 323 aa12□□□□□ -0.49
COPA-202ENST00000368069 HACD1B0YJ81 288 aa12□□□□□ -0.49
COPA-202ENST00000368069 DNM1LO00429 736 aa12□□□□□ -0.49
COPA-202ENST00000368069 MTA2O94776 668 aa12□□□□□ -0.49
COPA-202ENST00000368069 PSMG1O95456 288 aa12□□□□□ -0.49
COPA-202ENST00000368069 PYGLP06737 847 aa12□□□□□ -0.49
COPA-202ENST00000368069 PLOD1Q02809 727 aaPredicted RBP12□□□□□ -0.49
COPA-202ENST00000368069 BST1Q10588 318 aa12□□□□□ -0.49
COPA-202ENST00000368069 BIRC2Q13490 618 aa12□□□□□ -0.49
COPA-202ENST00000368069 MGAT5BQ3V5L5 792 aa12□□□□□ -0.49
COPA-202ENST00000368069 LACTB2Q53H82 288 aaPredicted RBP12□□□□□ -0.49
COPA-202ENST00000368069 SPANXN3Q5MJ09 141 aa12□□□□□ -0.49
COPA-202ENST00000368069 GRAMD4Q6IC98 578 aa12□□□□□ -0.49
COPA-202ENST00000368069 DAW1Q8N136 415 aa12□□□□□ -0.49
COPA-202ENST00000368069 USP13Q92995 863 aaPredicted RBP12□□□□□ -0.49
COPA-202ENST00000368069 FAR2Q96K12 515 aa12□□□□□ -0.49
COPA-202ENST00000368069 CATSPER2Q96P56 530 aa12□□□□□ -0.49
COPA-202ENST00000368069 CPNE1Q99829 537 aa12□□□□□ -0.49
COPA-202ENST00000368069 ARHGAP28Q9P2N2 729 aa12□□□□□ -0.49
COPA-202ENST00000368069 V9GYQ6 96 aa12□□□□□ -0.49
COPA-202ENST00000368069 TPP1O14773 563 aa11.99□□□□□ -0.49
COPA-202ENST00000368069 AVILO75366 819 aa11.99□□□□□ -0.49
COPA-202ENST00000368069 HSPA1AP0DMV8 641 aaKnown RBP11.99□□□□□ -0.49
COPA-202ENST00000368069 HSPA1BP0DMV9 641 aaKnown RBP11.99□□□□□ -0.49
COPA-202ENST00000368069 ERVK-10P10266 1014 aa11.99□□□□□ -0.49
COPA-202ENST00000368069 TSHRP16473 764 aa11.99□□□□□ -0.49
COPA-202ENST00000368069 NUMBP49757 651 aa11.99□□□□□ -0.49
COPA-202ENST00000368069 KCNK10P57789 538 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms