RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 SIK3Q9Y2K2 1263 aa10.29□□□□□ -0.76
CD48-202ENST00000368046 R4GN57 208 aa10.29□□□□□ -0.76
CD48-202ENST00000368046 OBSL1O75147 1896 aa10.29□□□□□ -0.76
CD48-202ENST00000368046 TICRRQ7Z2Z1 1910 aa10.29□□□□□ -0.76
CD48-202ENST00000368046 SYCE3A1L190 88 aa10.28□□□□□ -0.76
CD48-202ENST00000368046 TBC1D3BA6NDS4 549 aa10.28□□□□□ -0.76
CD48-202ENST00000368046 LGALS16A8MUM7 142 aa10.28□□□□□ -0.76
CD48-202ENST00000368046 NEDD8-MDP1E9PL57 170 aa10.28□□□□□ -0.76
CD48-202ENST00000368046 LCE2BO14633 110 aa10.28□□□□□ -0.76
CD48-202ENST00000368046 CAPN9O14815 690 aa10.28□□□□□ -0.76
CD48-202ENST00000368046 TULP3O75386 442 aa10.28□□□□□ -0.76
CD48-202ENST00000368046 LATS1O95835 1130 aa10.28□□□□□ -0.76
CD48-202ENST00000368046 APODP05090 189 aa10.28□□□□□ -0.76
CD48-202ENST00000368046 GLI1P08151 1106 aa10.28□□□□□ -0.76
CD48-202ENST00000368046 TDGF1P13385 188 aa10.28□□□□□ -0.76
CD48-202ENST00000368046 ATP1A3P13637 1013 aa10.28□□□□□ -0.76
CD48-202ENST00000368046 TYRP14679 529 aa10.28□□□□□ -0.76
CD48-202ENST00000368046 HOXA6P31267 233 aa10.28□□□□□ -0.76
CD48-202ENST00000368046 STAT1P42224 750 aa10.28□□□□□ -0.76
CD48-202ENST00000368046 KLK7P49862 253 aa10.28□□□□□ -0.76
CD48-202ENST00000368046 MRE11P49959 708 aa10.28□□□□□ -0.76
CD48-202ENST00000368046 MRPS21P82921 87 aaKnown RBP10.28□□□□□ -0.76
CD48-202ENST00000368046 RING1Q06587 406 aa10.28□□□□□ -0.76
CD48-202ENST00000368046 IQCB1Q15051 598 aa10.28□□□□□ -0.76
CD48-202ENST00000368046 FILIP1LQ4L180 1135 aa10.28□□□□□ -0.76
CD48-202ENST00000368046 SYPL2Q5VXT5 272 aa10.28□□□□□ -0.76
CD48-202ENST00000368046 SYT13Q7L8C5 426 aa10.28□□□□□ -0.76
CD48-202ENST00000368046 C12orf40Q86WS4 652 aa10.28□□□□□ -0.76
CD48-202ENST00000368046 ZNF677Q86XU0 584 aa10.28□□□□□ -0.76
CD48-202ENST00000368046 ETFBKMTQ8IXQ9 262 aa10.28□□□□□ -0.76
CD48-202ENST00000368046 CPXM2Q8N436 756 aa10.28□□□□□ -0.76
CD48-202ENST00000368046 CAMKK1Q8N5S9 505 aa10.28□□□□□ -0.76
CD48-202ENST00000368046 TMEM35BQ8NCS4 154 aa10.28□□□□□ -0.76
CD48-202ENST00000368046 NEK11Q8NG66 645 aa10.28□□□□□ -0.76
CD48-202ENST00000368046 KCNV2Q8TDN2 545 aa10.28□□□□□ -0.76
CD48-202ENST00000368046 DDX1Q92499 740 aaKnown RBP10.28□□□□□ -0.76
CD48-202ENST00000368046 AZIN2Q96A70 460 aa10.28□□□□□ -0.76
CD48-202ENST00000368046 FAM149B1Q96BN6 582 aa10.28□□□□□ -0.76
CD48-202ENST00000368046 CPXM1Q96SM3 734 aa10.28□□□□□ -0.76
CD48-202ENST00000368046 POPDC2Q9HBU9 364 aa10.28□□□□□ -0.76
CD48-202ENST00000368046 NLRC4Q9NPP4 1024 aa10.28□□□□□ -0.76
CD48-202ENST00000368046 ARHGEF4Q9NR80 690 aa10.28□□□□□ -0.76
CD48-202ENST00000368046 STOML2Q9UJZ1 356 aa10.28□□□□□ -0.76
CD48-202ENST00000368046 SLC8A2Q9UPR5 921 aa10.28□□□□□ -0.76
CD48-202ENST00000368046 NAALADL1Q9UQQ1 740 aa10.28□□□□□ -0.76
CD48-202ENST00000368046 CEP83Q9Y592 693 aa10.28□□□□□ -0.76
CD48-202ENST00000368046 PCDHGA2Q9Y5H1 932 aa10.28□□□□□ -0.76
CD48-202ENST00000368046 MUC6Q6W4X9 2439 aa10.28□□□□□ -0.76
CD48-202ENST00000368046 ZNF638Q14966 1978 aaKnown RBP10.28□□□□□ -0.76
CD48-202ENST00000368046 F8VZ95 297 aa10.27□□□□□ -0.77
CD48-202ENST00000368046 K7ESF4 209 aa10.27□□□□□ -0.77
CD48-202ENST00000368046 CACNG3O60359 315 aa10.27□□□□□ -0.77
CD48-202ENST00000368046 CAVIN2O95810 425 aa10.27□□□□□ -0.77
CD48-202ENST00000368046 CYBBP04839 570 aa10.27□□□□□ -0.77
CD48-202ENST00000368046 CISD3P0C7P0 127 aa10.27□□□□□ -0.77
CD48-202ENST00000368046 CDH5P33151 784 aaPredicted RBP10.27□□□□□ -0.77
CD48-202ENST00000368046 SOX5P35711 763 aa10.27□□□□□ -0.77
CD48-202ENST00000368046 GABRB2P47870 512 aa10.27□□□□□ -0.77
CD48-202ENST00000368046 TBX4P57082 545 aa10.27□□□□□ -0.77
CD48-202ENST00000368046 JAM2P57087 298 aa10.27□□□□□ -0.77
CD48-202ENST00000368046 SLC6A3Q01959 620 aa10.27□□□□□ -0.77
CD48-202ENST00000368046 MESP2Q0VG99 397 aa10.27□□□□□ -0.77
CD48-202ENST00000368046 LAPTM4AQ15012 233 aa10.27□□□□□ -0.77
CD48-202ENST00000368046 MPPE1Q53F39 396 aa10.27□□□□□ -0.77
CD48-202ENST00000368046 C2orf27AQ580R0 203 aa10.27□□□□□ -0.77
CD48-202ENST00000368046 ADGRF1Q5T601 910 aa10.27□□□□□ -0.77
CD48-202ENST00000368046 EMC10Q5UCC4 262 aa10.27□□□□□ -0.77
CD48-202ENST00000368046 FYB2Q5VWT5 728 aa10.27□□□□□ -0.77
CD48-202ENST00000368046 OR6B2Q6IFH4 312 aa10.27□□□□□ -0.77
CD48-202ENST00000368046 PKN3Q6P5Z2 889 aa10.27□□□□□ -0.77
CD48-202ENST00000368046 ZDHHC17Q8IUH5 632 aa10.27□□□□□ -0.77
CD48-202ENST00000368046 PASD1Q8IV76 773 aa10.27□□□□□ -0.77
CD48-202ENST00000368046 FAM217AQ8IXS0 508 aa10.27□□□□□ -0.77
CD48-202ENST00000368046 PHTF2Q8N3S3 785 aa10.27□□□□□ -0.77
CD48-202ENST00000368046 RPLP0P6Q8NHW5 317 aa10.27□□□□□ -0.77
CD48-202ENST00000368046 DQX1Q8TE96 717 aaKnown RBP10.27□□□□□ -0.77
CD48-202ENST00000368046 USP33Q8TEY7 942 aa10.27□□□□□ -0.77
CD48-202ENST00000368046 NKD2Q969F2 451 aaPredicted RBP10.27□□□□□ -0.77
CD48-202ENST00000368046 TMA16Q96EY4 203 aaKnown RBP10.27□□□□□ -0.77
CD48-202ENST00000368046 SERPINB11Q96P15 392 aa10.27□□□□□ -0.77
CD48-202ENST00000368046 SPAG5Q96R06 1193 aa10.27□□□□□ -0.77
CD48-202ENST00000368046 SLC2A11Q9BYW1 496 aa10.27□□□□□ -0.77
CD48-202ENST00000368046 ASNSD1Q9NWL6 643 aa10.27□□□□□ -0.77
CD48-202ENST00000368046 C2orf42Q9NWW7 574 aa10.27□□□□□ -0.77
CD48-202ENST00000368046 STARD13Q9Y3M8 1113 aa10.27□□□□□ -0.77
CD48-202ENST00000368046 F5P12259 2224 aa10.27□□□□□ -0.77
CD48-202ENST00000368046 CCDC163A0A0D9SF12 145 aa10.26□□□□□ -0.77
CD48-202ENST00000368046 EPHB6O15197 1021 aa10.26□□□□□ -0.77
CD48-202ENST00000368046 TEX33O43247 280 aa10.26□□□□□ -0.77
CD48-202ENST00000368046 ACSL4O60488 711 aa10.26□□□□□ -0.77
CD48-202ENST00000368046 LILRB5O75023 590 aa10.26□□□□□ -0.77
CD48-202ENST00000368046 GFPT2O94808 682 aa10.26□□□□□ -0.77
CD48-202ENST00000368046 PENKP01210 267 aaPredicted RBP10.26□□□□□ -0.77
CD48-202ENST00000368046 IGLV3-27P01718 113 aa10.26□□□□□ -0.77
CD48-202ENST00000368046 LMNAP02545 664 aaKnown RBP10.26□□□□□ -0.77
CD48-202ENST00000368046 CNR2P34972 360 aa10.26□□□□□ -0.77
CD48-202ENST00000368046 KIR2DL1P43626 348 aaPredicted RBP10.26□□□□□ -0.77
CD48-202ENST00000368046 SLC11A2P49281 568 aa10.26□□□□□ -0.77
CD48-202ENST00000368046 DGKGP49619 791 aa10.26□□□□□ -0.77
CD48-202ENST00000368046 ZNF445P59923 1031 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms