RNA–Protein interactions for RNA: ENST00000366767.7

CDC42BPA-204, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 9,320 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-204ENST00000366767 ZNF408Q9H9D4 720 aa5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 KCNK4Q9NYG8 393 aa5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 COX16Q9P0S2 106 aa5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 IPPQ9Y573 584 aa5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 B4GALT4O60513 344 aa5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 MYL4P12829 197 aa5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 POU5F1BQ06416 359 aa5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 KYAT3Q6YP21 454 aaKnown RBP5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 PRUNE1Q86TP1 453 aa5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 TRIM74Q86UV6 250 aa5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 TRIM73Q86UV7 250 aa5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 TCP10LQ8TDR4 215 aa5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 ASAP3Q8TDY4 903 aa5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 FAM118BQ9BPY3 351 aa5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 KLHL31Q9H511 634 aa5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 CPSF3Q9UKF6 684 aaKnown RBP5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 PCDHAC2Q9Y5I4 1007 aa5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 GMEB1Q9Y692 573 aa5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 CITO14578 2027 aa5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 SDR42E2A6NKP2 422 aa5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 H0YC42 278 aa5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 H0YGN5 161 aa5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 GOLGA8RI6L899 631 aa5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 HOXD13P35453 343 aa5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 PPARGP37231 505 aaPredicted RBP5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 RGS7P49802 495 aa5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 HK2P52789 917 aa5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 PLOD1Q02809 727 aaPredicted RBP5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 CHI3L2Q15782 390 aa5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 QPCTQ16769 361 aa5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 SPANXN3Q5MJ09 141 aa5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 SAMD7Q7Z3H4 446 aa5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 PPHLN1Q8NEY8 458 aaKnown RBP5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 VTA1Q9NP79 307 aa5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 SUN2Q9UH99 717 aa5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 NFS1Q9Y697 457 aa5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 C2CD2LO14523 706 aa5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 TNPO2O14787 897 aaKnown RBP5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 CHEK2O96017 543 aa5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 GSNP06396 782 aa5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 LCP1P13796 627 aa5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 ZNF143P52747 638 aaPredicted RBP5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 PPIDQ08752 370 aaKnown RBP5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 TAF12Q16514 161 aa5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 NDUFA5Q16718 116 aa5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 WLSQ5T9L3 541 aa5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 C6orf89Q6UWU4 347 aa5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 REPS2Q8NFH8 660 aa5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 ATP6V1E2Q96A05 226 aa5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 RNF157Q96PX1 679 aa5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 FAM111AQ96PZ2 611 aa5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 KLHL4Q9C0H6 718 aa5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 DDX18Q9NVP1 670 aaKnown RBP5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 TAGLN3Q9UI15 199 aa5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 MROH7Q68CQ1 1323 aa5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 CFAP99D6REC4 459 aa5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 ANXA9O76027 345 aa5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 CYP2C9P11712 490 aa5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 ITKQ08881 620 aa5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 DCTN2Q13561 401 aaKnown RBP5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 UGCGQ16739 394 aa5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 SMTNL2Q2TAL5 461 aa5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 CCDC153Q494R4 210 aa5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 IRGCQ6NXR0 463 aa5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 LPCAT2Q7L5N7 544 aa5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 FAM172AQ8WUF8 416 aa5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 TSPAN17Q96FV3 270 aa5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 PAIP1Q9H074 479 aaKnown RBP5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 ZNF212Q9UDV6 495 aa5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 AAR2Q9Y312 384 aaKnown RBP5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 COL1A2P08123 1366 aa5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 EDF1O60869 148 aaKnown RBP5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 ADORA2BP29275 332 aa5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 MIPP30301 263 aa5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 GNL1P36915 607 aaPredicted RBP5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 IL12RB1P42701 662 aa5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 MARCKSL1P49006 195 aa5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 NPY2RP49146 381 aa5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 SLC6A3Q01959 620 aa5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 CELF3Q5SZQ8 465 aaKnown RBP5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 ZBTB18Q99592 522 aa5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 CATSPERBQ9H7T0 1116 aa5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 CYLDQ9NQC7 956 aa5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 GTSE1Q9NYZ3 720 aa5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 ATXN10Q9UBB4 475 aa5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 AJAP1Q9UKB5 411 aaPredicted RBP5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 DDX60Q8IY21 1712 aaKnown RBP5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 F8VP50 259 aa5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 F8W8V4 182 aa5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 HSPA1AP0DMV8 641 aaKnown RBP5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 HSPA1BP0DMV9 641 aaKnown RBP5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 RPL22P35268 128 aaKnown RBP5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 IZUMO2Q6UXV1 221 aa5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 IL31RAQ8NI17 732 aa5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 GINS4Q9BRT9 223 aa5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 TMEM120AQ9BXJ8 343 aa5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 ELP3Q9H9T3 547 aa5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 RAD54BQ9Y620 910 aa5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 PYGLP06737 847 aa5.51□□□□□ -1.53
CDC42BPA-204ENST00000366767 THRAP10827 490 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms