RNA–Protein interactions for RNA: ENST00000366744.5

MRPL55-216, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MRPL55, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-216ENST00000366744 HHIPQ96QV1 700 aa9.72□□□□□ -0.85
MRPL55-216ENST00000366744 BPIFA3Q9BQP9 254 aa9.72□□□□□ -0.85
MRPL55-216ENST00000366744 ZSWIM1Q9BR11 485 aa9.72□□□□□ -0.85
MRPL55-216ENST00000366744 STK33Q9BYT3 514 aa9.72□□□□□ -0.85
MRPL55-216ENST00000366744 EPC1Q9H2F5 836 aa9.72□□□□□ -0.85
MRPL55-216ENST00000366744 POPDC2Q9HBU9 364 aa9.72□□□□□ -0.85
MRPL55-216ENST00000366744 POLMQ9NP87 494 aaPredicted RBP9.72□□□□□ -0.85
MRPL55-216ENST00000366744 PLCB1Q9NQ66 1216 aa9.72□□□□□ -0.85
MRPL55-216ENST00000366744 BCCIPQ9P287 314 aaKnown RBP eCLIP9.72□□□□□ -0.85
MRPL55-216ENST00000366744 SFMBT1Q9UHJ3 866 aa9.72□□□□□ -0.85
MRPL55-216ENST00000366744 MMP17Q9ULZ9 603 aa9.72□□□□□ -0.85
MRPL55-216ENST00000366744 FRYLO94915 3013 aa9.72□□□□□ -0.85
MRPL55-216ENST00000366744 DMDP11532 3685 aa9.71□□□□□ -0.85
MRPL55-216ENST00000366744 CCDC163A0A0D9SF12 145 aa9.71□□□□□ -0.86
MRPL55-216ENST00000366744 FOXN3O00409 490 aaPredicted RBP9.71□□□□□ -0.86
MRPL55-216ENST00000366744 IRAK2O43187 625 aa9.71□□□□□ -0.86
MRPL55-216ENST00000366744 KLF8O95600 359 aaPredicted RBP9.71□□□□□ -0.86
MRPL55-216ENST00000366744 CCDC172P0C7W6 258 aa9.71□□□□□ -0.86
MRPL55-216ENST00000366744 PNMA6AP0CW24 399 aaPredicted RBP9.71□□□□□ -0.86
MRPL55-216ENST00000366744 CYP11B1P15538 503 aa9.71□□□□□ -0.86
MRPL55-216ENST00000366744 HOXA6P31267 233 aa9.71□□□□□ -0.86
MRPL55-216ENST00000366744 GBP1P32455 592 aa9.71□□□□□ -0.86
MRPL55-216ENST00000366744 TIE1P35590 1138 aa9.71□□□□□ -0.86
MRPL55-216ENST00000366744 STAT1P42224 750 aa9.71□□□□□ -0.86
MRPL55-216ENST00000366744 SLC6A11P48066 632 aa9.71□□□□□ -0.86
MRPL55-216ENST00000366744 ZNF165P49910 485 aa9.71□□□□□ -0.86
MRPL55-216ENST00000366744 POLR2FP61218 127 aaKnown RBP9.71□□□□□ -0.86
MRPL55-216ENST00000366744 YWHAZP63104 245 aaKnown RBP9.71□□□□□ -0.86
MRPL55-216ENST00000366744 RING1Q06587 406 aa9.71□□□□□ -0.86
MRPL55-216ENST00000366744 NNTQ13423 1086 aa9.71□□□□□ -0.86
MRPL55-216ENST00000366744 SIM2Q14190 667 aaPredicted RBP9.71□□□□□ -0.86
MRPL55-216ENST00000366744 STARD3Q14849 445 aa9.71□□□□□ -0.86
MRPL55-216ENST00000366744 SKOR2Q2VWA4 1001 aaPredicted RBP9.71□□□□□ -0.86
MRPL55-216ENST00000366744 MPPE1Q53F39 396 aa9.71□□□□□ -0.86
MRPL55-216ENST00000366744 EFHC1Q5JVL4 640 aa9.71□□□□□ -0.86
MRPL55-216ENST00000366744 ADGRF1Q5T601 910 aa9.71□□□□□ -0.86
MRPL55-216ENST00000366744 TAF3Q5VWG9 929 aa9.71□□□□□ -0.86
MRPL55-216ENST00000366744 BEND5Q7L4P6 421 aa9.71□□□□□ -0.86
MRPL55-216ENST00000366744 BHLHA9Q7RTU4 235 aa9.71□□□□□ -0.86
MRPL55-216ENST00000366744 ANKS1BQ7Z6G8 1248 aa9.71□□□□□ -0.86
MRPL55-216ENST00000366744 C11orf74Q86VG3 221 aa9.71□□□□□ -0.86
MRPL55-216ENST00000366744 WDR5BQ86VZ2 330 aa9.71□□□□□ -0.86
MRPL55-216ENST00000366744 C12orf40Q86WS4 652 aa9.71□□□□□ -0.86
MRPL55-216ENST00000366744 ZNF677Q86XU0 584 aa9.71□□□□□ -0.86
MRPL55-216ENST00000366744 ETFBKMTQ8IXQ9 262 aa9.71□□□□□ -0.86
MRPL55-216ENST00000366744 CHPFQ8IZ52 775 aa9.71□□□□□ -0.86
MRPL55-216ENST00000366744 KCNV2Q8TDN2 545 aa9.71□□□□□ -0.86
MRPL55-216ENST00000366744 USP33Q8TEY7 942 aa9.71□□□□□ -0.86
MRPL55-216ENST00000366744 RUBCNQ92622 972 aa9.71□□□□□ -0.86
MRPL55-216ENST00000366744 RNF34Q969K3 372 aa9.71□□□□□ -0.86
MRPL55-216ENST00000366744 SPACA7Q96KW9 195 aa9.71□□□□□ -0.86
MRPL55-216ENST00000366744 SLC4A5Q9BY07 1137 aa9.71□□□□□ -0.86
MRPL55-216ENST00000366744 LHX5Q9H2C1 402 aa9.71□□□□□ -0.86
MRPL55-216ENST00000366744 FBRSL1Q9HCM7 1045 aaKnown RBP9.71□□□□□ -0.86
MRPL55-216ENST00000366744 ACP6Q9NPH0 428 aa9.71□□□□□ -0.86
MRPL55-216ENST00000366744 TJP2Q9UDY2 1190 aa9.71□□□□□ -0.86
MRPL55-216ENST00000366744 LIMA1Q9UHB6 759 aaKnown RBP9.71□□□□□ -0.86
MRPL55-216ENST00000366744 SLC12A6Q9UHW9 1150 aa9.71□□□□□ -0.86
MRPL55-216ENST00000366744 AGO1Q9UL18 857 aaKnown RBP9.71□□□□□ -0.86
MRPL55-216ENST00000366744 STAP1Q9ULZ2 295 aa9.71□□□□□ -0.86
MRPL55-216ENST00000366744 TLR6Q9Y2C9 796 aa9.71□□□□□ -0.86
MRPL55-216ENST00000366744 PAXBP1Q9Y5B6 917 aa9.71□□□□□ -0.86
MRPL55-216ENST00000366744 SPTBN4Q9H254 2564 aa9.71□□□□□ -0.86
MRPL55-216ENST00000366744 SYCE3A1L190 88 aa9.7□□□□□ -0.86
MRPL55-216ENST00000366744 GOLGA6L19H0YKK7 550 aa9.7□□□□□ -0.86
MRPL55-216ENST00000366744 K7EQS6 105 aa9.7□□□□□ -0.86
MRPL55-216ENST00000366744 K7ESF4 209 aa9.7□□□□□ -0.86
MRPL55-216ENST00000366744 AXIN1O15169 862 aa9.7□□□□□ -0.86
MRPL55-216ENST00000366744 PAPSS1O43252 624 aaPredicted RBP9.7□□□□□ -0.86
MRPL55-216ENST00000366744 LILRB5O75023 590 aa9.7□□□□□ -0.86
MRPL55-216ENST00000366744 RPP40O75818 363 aaKnown RBP9.7□□□□□ -0.86
MRPL55-216ENST00000366744 GFPT2O94808 682 aa9.7□□□□□ -0.86
MRPL55-216ENST00000366744 CAVIN2O95810 425 aa9.7□□□□□ -0.86
MRPL55-216ENST00000366744 MOCS2O96007 188 aaPredicted RBP9.7□□□□□ -0.86
MRPL55-216ENST00000366744 PENKP01210 267 aaPredicted RBP9.7□□□□□ -0.86
MRPL55-216ENST00000366744 GLI1P08151 1106 aa9.7□□□□□ -0.86
MRPL55-216ENST00000366744 SLC2A3P11169 496 aa9.7□□□□□ -0.86
MRPL55-216ENST00000366744 CDK17Q00537 523 aa9.7□□□□□ -0.86
MRPL55-216ENST00000366744 MTA1Q13330 715 aa9.7□□□□□ -0.86
MRPL55-216ENST00000366744 EIF4HQ15056 248 aaKnown RBP9.7□□□□□ -0.86
MRPL55-216ENST00000366744 ELF2Q15723 593 aa9.7□□□□□ -0.86
MRPL55-216ENST00000366744 GAB4Q2WGN9 574 aa9.7□□□□□ -0.86
MRPL55-216ENST00000366744 DCAF6Q58WW2 860 aa9.7□□□□□ -0.86
MRPL55-216ENST00000366744 LAIR1Q6GTX8 287 aa9.7□□□□□ -0.86
MRPL55-216ENST00000366744 OR6B2Q6IFH4 312 aa9.7□□□□□ -0.86
MRPL55-216ENST00000366744 ANO7Q6IWH7 933 aa9.7□□□□□ -0.86
MRPL55-216ENST00000366744 PKN3Q6P5Z2 889 aa9.7□□□□□ -0.86
MRPL55-216ENST00000366744 SND1Q7KZF4 910 aaKnown RBP eCLIP9.7□□□□□ -0.86
MRPL55-216ENST00000366744 ASCL5Q7RTU5 278 aa9.7□□□□□ -0.86
MRPL55-216ENST00000366744 TMEM110Q86TL2 294 aa9.7□□□□□ -0.86
MRPL55-216ENST00000366744 TAC4Q86UU9 113 aa9.7□□□□□ -0.86
MRPL55-216ENST00000366744 PGBD3Q8N328 593 aa9.7□□□□□ -0.86
MRPL55-216ENST00000366744 CCDC33Q8N5R6 958 aa9.7□□□□□ -0.86
MRPL55-216ENST00000366744 ALLCQ8N6M5 410 aa9.7□□□□□ -0.86
MRPL55-216ENST00000366744 TXNDC5Q8NBS9 432 aaKnown RBP9.7□□□□□ -0.86
MRPL55-216ENST00000366744 HJURPQ8NCD3 748 aaPredicted RBP9.7□□□□□ -0.86
MRPL55-216ENST00000366744 DQX1Q8TE96 717 aaKnown RBP9.7□□□□□ -0.86
MRPL55-216ENST00000366744 NELL1Q92832 810 aa9.7□□□□□ -0.86
MRPL55-216ENST00000366744 WBP2Q969T9 261 aa9.7□□□□□ -0.86
MRPL55-216ENST00000366744 CPXM1Q96SM3 734 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms