RNA–Protein interactions for RNA: ENST00000361901.6

CALD1-202, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,114 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-202ENST00000361901 CCDC78A2IDD5 438 aa9.5□□□□□ -0.89
CALD1-202ENST00000361901 PSTPIP1O43586 416 aa9.5□□□□□ -0.89
CALD1-202ENST00000361901 KPNA6O60684 536 aa9.5□□□□□ -0.89
CALD1-202ENST00000361901 S100BP04271 92 aaPredicted RBP9.5□□□□□ -0.89
CALD1-202ENST00000361901 CYP1A1P04798 512 aaPredicted RBP9.5□□□□□ -0.89
CALD1-202ENST00000361901 STILQ15468 1287 aa9.5□□□□□ -0.89
CALD1-202ENST00000361901 NPNTQ6UXI9 565 aa9.5□□□□□ -0.89
CALD1-202ENST00000361901 C15orf39Q6ZRI6 1047 aa9.5□□□□□ -0.89
CALD1-202ENST00000361901 ARHGEF18Q6ZSZ5 1173 aa9.5□□□□□ -0.89
CALD1-202ENST00000361901 KDELC2Q7Z4H8 507 aa9.5□□□□□ -0.89
CALD1-202ENST00000361901 GDAP1Q8TB36 358 aa9.5□□□□□ -0.89
CALD1-202ENST00000361901 RBM15Q96T37 977 aaKnown RBP eCLIP9.5□□□□□ -0.89
CALD1-202ENST00000361901 XYLT2Q9H1B5 865 aa9.5□□□□□ -0.89
CALD1-202ENST00000361901 LNPEPQ9UIQ6 1025 aa9.5□□□□□ -0.89
CALD1-202ENST00000361901 USP15Q9Y4E8 981 aaPredicted RBP9.5□□□□□ -0.89
CALD1-202ENST00000361901 UNCXA6NJT0 531 aa9.5□□□□□ -0.89
CALD1-202ENST00000361901 ZBBXA8MT70 800 aa9.5□□□□□ -0.89
CALD1-202ENST00000361901 HMGCRP04035 888 aa9.5□□□□□ -0.89
CALD1-202ENST00000361901 APRTP07741 180 aa9.5□□□□□ -0.89
CALD1-202ENST00000361901 CALB2P22676 271 aa9.5□□□□□ -0.89
CALD1-202ENST00000361901 HOXA11P31270 313 aaPredicted RBP9.5□□□□□ -0.89
CALD1-202ENST00000361901 VHLP40337 213 aa9.5□□□□□ -0.89
CALD1-202ENST00000361901 ABL2P42684 1182 aa9.5□□□□□ -0.89
CALD1-202ENST00000361901 BCAT1P54687 386 aa9.5□□□□□ -0.89
CALD1-202ENST00000361901 ROR1Q01973 937 aa9.5□□□□□ -0.89
CALD1-202ENST00000361901 SDHAF4Q5VUM1 108 aa9.5□□□□□ -0.89
CALD1-202ENST00000361901 TRIM67Q6ZTA4 783 aa9.5□□□□□ -0.89
CALD1-202ENST00000361901 PIGZQ86VD9 579 aa9.5□□□□□ -0.89
CALD1-202ENST00000361901 EXD1Q8NHP7 514 aa9.5□□□□□ -0.89
CALD1-202ENST00000361901 ARPC5LQ9BPX5 153 aa9.5□□□□□ -0.89
CALD1-202ENST00000361901 NEUROG2Q9H2A3 272 aa9.5□□□□□ -0.89
CALD1-202ENST00000361901 TMBIM4Q9HC24 238 aa9.5□□□□□ -0.89
CALD1-202ENST00000361901 RAB6BQ9NRW1 208 aa9.5□□□□□ -0.89
CALD1-202ENST00000361901 DDIT4Q9NX09 232 aa9.5□□□□□ -0.89
CALD1-202ENST00000361901 TXNDC16Q9P2K2 825 aa9.5□□□□□ -0.89
CALD1-202ENST00000361901 TMEM191CA6NGB0 347 aa9.49□□□□□ -0.89
CALD1-202ENST00000361901 ABLIM1O14639 778 aa9.49□□□□□ -0.89
CALD1-202ENST00000361901 LMNAP02545 664 aaKnown RBP9.49□□□□□ -0.89
CALD1-202ENST00000361901 CD48P09326 243 aa9.49□□□□□ -0.89
CALD1-202ENST00000361901 AXLP30530 894 aa9.49□□□□□ -0.89
CALD1-202ENST00000361901 GALK1P51570 392 aa9.49□□□□□ -0.89
CALD1-202ENST00000361901 NEK2P51955 445 aa9.49□□□□□ -0.89
CALD1-202ENST00000361901 MORN1Q5T089 497 aa9.49□□□□□ -0.89
CALD1-202ENST00000361901 C6orf89Q6UWU4 347 aa9.49□□□□□ -0.89
CALD1-202ENST00000361901 SLFN11Q7Z7L1 901 aa9.49□□□□□ -0.89
CALD1-202ENST00000361901 DEFB106AQ8N104 65 aa9.49□□□□□ -0.89
CALD1-202ENST00000361901 CFAP61Q8NHU2 1237 aa9.49□□□□□ -0.89
CALD1-202ENST00000361901 CLEC4CQ8WTT0 213 aa9.49□□□□□ -0.89
CALD1-202ENST00000361901 PPP1R14BQ96C90 147 aa9.49□□□□□ -0.89
CALD1-202ENST00000361901 SEPT5Q99719 369 aaPredicted RBP9.49□□□□□ -0.89
CALD1-202ENST00000361901 CNPY3Q9BT09 278 aa9.49□□□□□ -0.89
CALD1-202ENST00000361901 FAM192AQ9GZU8 254 aa9.49□□□□□ -0.89
CALD1-202ENST00000361901 ITGB1BP2Q9UKP3 347 aa9.49□□□□□ -0.89
CALD1-202ENST00000361901 GNEQ9Y223 722 aaKnown RBP9.49□□□□□ -0.89
CALD1-202ENST00000361901 PMM2O15305 246 aa9.49□□□□□ -0.89
CALD1-202ENST00000361901 FAM163BP0C2L3 166 aa9.49□□□□□ -0.89
CALD1-202ENST00000361901 USP17L7P0C7H9 530 aa9.49□□□□□ -0.89
CALD1-202ENST00000361901 SAT1P21673 171 aa9.49□□□□□ -0.89
CALD1-202ENST00000361901 BST2Q10589 180 aaKnown RBP9.49□□□□□ -0.89
CALD1-202ENST00000361901 TTC27Q6P3X3 843 aa9.49□□□□□ -0.89
CALD1-202ENST00000361901 CTU1Q7Z7A3 348 aaKnown RBP9.49□□□□□ -0.89
CALD1-202ENST00000361901 SRRM1Q8IYB3 904 aaKnown RBP9.49□□□□□ -0.89
CALD1-202ENST00000361901 PDIK1LQ8N165 341 aa9.49□□□□□ -0.89
CALD1-202ENST00000361901 BBOF1Q8ND07 529 aa9.49□□□□□ -0.89
CALD1-202ENST00000361901 SNX27Q96L92 541 aa9.49□□□□□ -0.89
CALD1-202ENST00000361901 DCLK3Q9C098 648 aa9.49□□□□□ -0.89
CALD1-202ENST00000361901 PLEKHA5Q9HAU0 1116 aa9.49□□□□□ -0.89
CALD1-202ENST00000361901 PALMDQ9NP74 551 aa9.49□□□□□ -0.89
CALD1-202ENST00000361901 PIH1D1Q9NWS0 290 aaKnown RBP9.49□□□□□ -0.89
CALD1-202ENST00000361901 COL11A1P12107 1806 aaPredicted RBP9.49□□□□□ -0.89
CALD1-202ENST00000361901 SIGLEC16A6NMB1 481 aa9.49□□□□□ -0.89
CALD1-202ENST00000361901 APOL1O14791 398 aa9.49□□□□□ -0.89
CALD1-202ENST00000361901 OR4Q2P0C623 313 aa9.49□□□□□ -0.89
CALD1-202ENST00000361901 CCDC166P0CW27 439 aa9.49□□□□□ -0.89
CALD1-202ENST00000361901 PTPN1P18031 435 aaKnown RBP9.49□□□□□ -0.89
CALD1-202ENST00000361901 PCSK1P29120 753 aa9.49□□□□□ -0.89
CALD1-202ENST00000361901 ATXN1P54253 815 aaKnown RBP9.49□□□□□ -0.89
CALD1-202ENST00000361901 LILRA4P59901 499 aa9.49□□□□□ -0.89
CALD1-202ENST00000361901 ZNF268Q14587 947 aaPredicted RBP9.49□□□□□ -0.89
CALD1-202ENST00000361901 BTBD8Q5XKL5 378 aa9.49□□□□□ -0.89
CALD1-202ENST00000361901 PLEKHA7Q6IQ23 1121 aa9.49□□□□□ -0.89
CALD1-202ENST00000361901 DNAAF3Q8N9W5 541 aa9.49□□□□□ -0.89
CALD1-202ENST00000361901 B3GALNT2Q8NCR0 500 aa9.49□□□□□ -0.89
CALD1-202ENST00000361901 ARRDC4Q8NCT1 418 aa9.49□□□□□ -0.89
CALD1-202ENST00000361901 RNPEPL1Q9HAU8 725 aa9.49□□□□□ -0.89
CALD1-202ENST00000361901 PTPRHQ9HD43 1115 aa9.49□□□□□ -0.89
CALD1-202ENST00000361901 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.49□□□□□ -0.892e-6■■■□□ 14.8
CALD1-202ENST00000361901 KIAA1257Q9ULG3 409 aa9.49□□□□□ -0.89
CALD1-202ENST00000361901 PHF24Q9UPV7 400 aa9.49□□□□□ -0.89
CALD1-202ENST00000361901 ATP11BQ9Y2G3 1177 aa9.49□□□□□ -0.89
CALD1-202ENST00000361901 NEU2Q9Y3R4 380 aa9.49□□□□□ -0.89
CALD1-202ENST00000361901 CITO14578 2027 aa9.49□□□□□ -0.89
CALD1-202ENST00000361901 WDR91A4D1P6 747 aa9.48□□□□□ -0.89
CALD1-202ENST00000361901 STAMBPO95630 424 aa9.48□□□□□ -0.89
CALD1-202ENST00000361901 AFF1P51825 1210 aaKnown RBP9.48□□□□□ -0.89
CALD1-202ENST00000361901 ITIH3Q06033 890 aa9.48□□□□□ -0.89
CALD1-202ENST00000361901 SOWAHAQ2M3V2 549 aa9.48□□□□□ -0.89
CALD1-202ENST00000361901 MGAT5BQ3V5L5 792 aa9.48□□□□□ -0.89
CALD1-202ENST00000361901 EFHC2Q5JST6 749 aa9.48□□□□□ -0.89
CALD1-202ENST00000361901 OVOS1Q6IE37 1185 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms