RNA–Protein interactions for RNA: ENST00000360620.7

EPHB4-202, Transcript of EPH receptor B4, humanhuman

TSL 1 (best) BASIC

Gene EPHB4, Length 3,789 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-202ENST00000360620 RPL5P46777 297 aaKnown RBP12.34□□□□□ -0.43
EPHB4-202ENST00000360620 RBP5P82980 135 aa12.34□□□□□ -0.43
EPHB4-202ENST00000360620 PPIDQ08752 370 aaKnown RBP12.34□□□□□ -0.43
EPHB4-202ENST00000360620 TDRD5Q8NAT2 981 aaKnown RBP12.34□□□□□ -0.43
EPHB4-202ENST00000360620 CRYGNQ8WXF5 182 aa12.34□□□□□ -0.43
EPHB4-202ENST00000360620 CCDC138Q96M89 665 aa12.34□□□□□ -0.43
EPHB4-202ENST00000360620 CATSPER2Q96P56 530 aa12.34□□□□□ -0.43
EPHB4-202ENST00000360620 NAT9Q9BTE0 207 aa12.34□□□□□ -0.43
EPHB4-202ENST00000360620 RNPEPQ9H4A4 650 aa12.34□□□□□ -0.43
EPHB4-202ENST00000360620 STAP1Q9ULZ2 295 aa12.34□□□□□ -0.43
EPHB4-202ENST00000360620 SNX13Q9Y5W8 968 aa12.34□□□□□ -0.43
EPHB4-202ENST00000360620 ECM29Q5VYK3 1845 aa12.34□□□□□ -0.43
EPHB4-202ENST00000360620 ITGB4P16144 1822 aa12.34□□□□□ -0.43
EPHB4-202ENST00000360620 C15orf38-AP3S2A0A0A6YYH1 394 aa12.34□□□□□ -0.43
EPHB4-202ENST00000360620 TPST1O60507 370 aa12.34□□□□□ -0.43
EPHB4-202ENST00000360620 CST3P01034 146 aaPredicted RBP12.34□□□□□ -0.43
EPHB4-202ENST00000360620 PEX2P28328 305 aa12.34□□□□□ -0.43
EPHB4-202ENST00000360620 FOLH1Q04609 750 aa12.34□□□□□ -0.43
EPHB4-202ENST00000360620 KCTD2Q14681 263 aa12.34□□□□□ -0.43
EPHB4-202ENST00000360620 PRKD1Q15139 912 aaPredicted RBP12.34□□□□□ -0.43
EPHB4-202ENST00000360620 MAPRE2Q15555 327 aa12.34□□□□□ -0.43
EPHB4-202ENST00000360620 ARMC3Q5W041 872 aa12.34□□□□□ -0.43
EPHB4-202ENST00000360620 B3GNT6Q6ZMB0 384 aa12.34□□□□□ -0.43
EPHB4-202ENST00000360620 ARPINQ7Z6K5 226 aa12.34□□□□□ -0.43
EPHB4-202ENST00000360620 STRA8Q7Z7C7 330 aa12.34□□□□□ -0.43
EPHB4-202ENST00000360620 HPS6Q86YV9 775 aa12.34□□□□□ -0.43
EPHB4-202ENST00000360620 TTLL6Q8N841 843 aa12.34□□□□□ -0.43
EPHB4-202ENST00000360620 PBXIP1Q96AQ6 731 aa12.34□□□□□ -0.43
EPHB4-202ENST00000360620 VPS39Q96JC1 886 aa12.34□□□□□ -0.43
EPHB4-202ENST00000360620 ZNF395Q9H8N7 513 aaPredicted RBP12.34□□□□□ -0.43
EPHB4-202ENST00000360620 PPM1HQ9ULR3 514 aa12.34□□□□□ -0.43
EPHB4-202ENST00000360620 ZNRF3Q9ULT6 936 aa12.34□□□□□ -0.43
EPHB4-202ENST00000360620 EFR3BQ9Y2G0 817 aa12.34□□□□□ -0.43
EPHB4-202ENST00000360620 TRAFD1O14545 582 aaPredicted RBP12.33□□□□□ -0.43
EPHB4-202ENST00000360620 TGM2P21980 687 aa12.33□□□□□ -0.43
EPHB4-202ENST00000360620 FDFT1P37268 417 aa12.33□□□□□ -0.43
EPHB4-202ENST00000360620 HSD17B4P51659 736 aa12.33□□□□□ -0.43
EPHB4-202ENST00000360620 PTK2BQ14289 1009 aa12.33□□□□□ -0.43
EPHB4-202ENST00000360620 STILQ15468 1287 aa12.33□□□□□ -0.43
EPHB4-202ENST00000360620 CNPY1Q3B7I2 92 aa12.33□□□□□ -0.43
EPHB4-202ENST00000360620 ACBD5Q5T8D3 534 aaPredicted RBP12.33□□□□□ -0.43
EPHB4-202ENST00000360620 ZNF772Q68DY9 489 aaPredicted RBP12.33□□□□□ -0.43
EPHB4-202ENST00000360620 KCNT2Q6UVM3 1135 aa12.33□□□□□ -0.43
EPHB4-202ENST00000360620 RBM44Q6ZP01 1051 aaKnown RBP12.33□□□□□ -0.43
EPHB4-202ENST00000360620 RTKN2Q8IZC4 609 aa12.33□□□□□ -0.43
EPHB4-202ENST00000360620 DCAKDQ8WVC6 231 aa12.33□□□□□ -0.43
EPHB4-202ENST00000360620 ZNF516Q92618 1163 aa12.33□□□□□ -0.43
EPHB4-202ENST00000360620 SDCCAG3Q96C92 435 aa12.33□□□□□ -0.43
EPHB4-202ENST00000360620 GPAMQ9HCL2 828 aa12.33□□□□□ -0.43
EPHB4-202ENST00000360620 FETUBQ9UGM5 382 aa12.33□□□□□ -0.43
EPHB4-202ENST00000360620 PLCH1Q4KWH8 1693 aa12.33□□□□□ -0.44
EPHB4-202ENST00000360620 MICAL2O94851 1124 aa12.33□□□□□ -0.44
EPHB4-202ENST00000360620 IL18RAPO95256 599 aa12.33□□□□□ -0.44
EPHB4-202ENST00000360620 MGAT1P26572 445 aa12.33□□□□□ -0.44
EPHB4-202ENST00000360620 GP5P40197 560 aa12.33□□□□□ -0.44
EPHB4-202ENST00000360620 TUBP50607 506 aa12.33□□□□□ -0.44
EPHB4-202ENST00000360620 CCNG1P51959 295 aa12.33□□□□□ -0.44
EPHB4-202ENST00000360620 TNFAIP8L3Q5GJ75 292 aa12.33□□□□□ -0.44
EPHB4-202ENST00000360620 NAT8LQ8N9F0 302 aa12.33□□□□□ -0.44
EPHB4-202ENST00000360620 RNF157Q96PX1 679 aa12.33□□□□□ -0.44
EPHB4-202ENST00000360620 EBF4Q9BQW3 602 aa12.33□□□□□ -0.44
EPHB4-202ENST00000360620 CCDC28BQ9BUN5 200 aa12.33□□□□□ -0.44
EPHB4-202ENST00000360620 MRIQ9BWK5 157 aa12.33□□□□□ -0.44
EPHB4-202ENST00000360620 PNPOQ9NVS9 261 aa12.33□□□□□ -0.44
EPHB4-202ENST00000360620 WARS2Q9UGM6 360 aaKnown RBP12.33□□□□□ -0.44
EPHB4-202ENST00000360620 CCDC88AQ3V6T2 1871 aa12.33□□□□□ -0.44
EPHB4-202ENST00000360620 E5RJQ4 531 aa12.33□□□□□ -0.44
EPHB4-202ENST00000360620 HNRNPRO43390 633 aaKnown RBP12.33□□□□□ -0.44
EPHB4-202ENST00000360620 TRUB2O95900 331 aaKnown RBP12.33□□□□□ -0.44
EPHB4-202ENST00000360620 PDGFRBP09619 1106 aa12.33□□□□□ -0.44
EPHB4-202ENST00000360620 ZBTB48P10074 688 aaPredicted RBP12.33□□□□□ -0.44
EPHB4-202ENST00000360620 TFE3P19532 575 aaPredicted RBP12.33□□□□□ -0.44
EPHB4-202ENST00000360620 MLH1P40692 756 aa12.33□□□□□ -0.44
EPHB4-202ENST00000360620 PTGER2P43116 358 aa12.33□□□□□ -0.44
EPHB4-202ENST00000360620 SERPINB8P50452 374 aa12.33□□□□□ -0.44
EPHB4-202ENST00000360620 RALGPS1Q5JS13 557 aa12.33□□□□□ -0.44
EPHB4-202ENST00000360620 MPZL3Q6UWV2 235 aa12.33□□□□□ -0.44
EPHB4-202ENST00000360620 VSIG10LQ86VR7 867 aa12.33□□□□□ -0.44
EPHB4-202ENST00000360620 FAM131BQ86XD5 332 aa12.33□□□□□ -0.44
EPHB4-202ENST00000360620 COLGALT1Q8NBJ5 622 aa12.33□□□□□ -0.44
EPHB4-202ENST00000360620 ZFRQ96KR1 1074 aaKnown RBP12.33□□□□□ -0.44
EPHB4-202ENST00000360620 SPATA16Q9BXB7 569 aa12.33□□□□□ -0.44
EPHB4-202ENST00000360620 PORCNQ9H237 461 aa12.33□□□□□ -0.44
EPHB4-202ENST00000360620 ATXN10Q9UBB4 475 aa12.33□□□□□ -0.44
EPHB4-202ENST00000360620 PAIP2BQ9ULR5 123 aaKnown RBP12.33□□□□□ -0.44
EPHB4-202ENST00000360620 PLA2G4CQ9UP65 541 aa12.33□□□□□ -0.44
EPHB4-202ENST00000360620 AP4E1Q9UPM8 1137 aa12.33□□□□□ -0.44
EPHB4-202ENST00000360620 ZNF862O60290 1169 aa12.32□□□□□ -0.44
EPHB4-202ENST00000360620 TRIM13O60858 407 aa12.32□□□□□ -0.44
EPHB4-202ENST00000360620 MYL4P12829 197 aa12.32□□□□□ -0.44
EPHB4-202ENST00000360620 DPEP1P16444 411 aa12.32□□□□□ -0.44
EPHB4-202ENST00000360620 ABCG1P45844 678 aa12.32□□□□□ -0.44
EPHB4-202ENST00000360620 YWHAZP63104 245 aaKnown RBP12.32□□□□□ -0.44
EPHB4-202ENST00000360620 PDK1Q15118 436 aa12.32□□□□□ -0.44
EPHB4-202ENST00000360620 RWDD4Q6NW29 188 aaKnown RBP12.32□□□□□ -0.44
EPHB4-202ENST00000360620 ZPBP2Q6X784 338 aa12.32□□□□□ -0.44
EPHB4-202ENST00000360620 ACOT1Q86TX2 421 aa12.32□□□□□ -0.44
EPHB4-202ENST00000360620 NRBF2Q96F24 287 aa12.32□□□□□ -0.44
EPHB4-202ENST00000360620 PRR11Q96HE9 360 aaPredicted RBP12.32□□□□□ -0.44
EPHB4-202ENST00000360620 EBNA1BP2Q99848 306 aaKnown RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms