RNA–Protein interactions for RNA: ENST00000359785.9

PTPN22-201, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN22, Length 3,654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-201ENST00000359785 GMIPQ9P107 970 aa4.67□□□□□ -1.66
PTPN22-201ENST00000359785 PACSIN2Q9UNF0 486 aaPredicted RBP4.67□□□□□ -1.66
PTPN22-201ENST00000359785 ERVK-11Q9UQG0 969 aa4.67□□□□□ -1.66
PTPN22-201ENST00000359785 ANKRD6Q9Y2G4 727 aa4.67□□□□□ -1.66
PTPN22-201ENST00000359785 OR5K3A6NET4 321 aa4.66□□□□□ -1.66
PTPN22-201ENST00000359785 FAM196BA6NMK8 535 aa4.66□□□□□ -1.66
PTPN22-201ENST00000359785 SHOXO15266 292 aa4.66□□□□□ -1.66
PTPN22-201ENST00000359785 PRPSAP2O60256 369 aa4.66□□□□□ -1.66
PTPN22-201ENST00000359785 ECM2O94769 699 aaPredicted RBP4.66□□□□□ -1.66
PTPN22-201ENST00000359785 PGM3O95394 542 aa4.66□□□□□ -1.66
PTPN22-201ENST00000359785 CLPTM1O96005 669 aa4.66□□□□□ -1.66
PTPN22-201ENST00000359785 CYP7A1P22680 504 aa4.66□□□□□ -1.66
PTPN22-201ENST00000359785 SLC7A1P30825 629 aa4.66□□□□□ -1.66
PTPN22-201ENST00000359785 DSG3P32926 999 aa4.66□□□□□ -1.66
PTPN22-201ENST00000359785 HSPA1LP34931 641 aa4.66□□□□□ -1.66
PTPN22-201ENST00000359785 LEPRP48357 1165 aaKnown RBP4.66□□□□□ -1.66
PTPN22-201ENST00000359785 HLCSP50747 726 aa4.66□□□□□ -1.66
PTPN22-201ENST00000359785 MFAP3P55082 362 aa4.66□□□□□ -1.66
PTPN22-201ENST00000359785 ADARB1P78563 741 aaKnown RBP4.66□□□□□ -1.66
PTPN22-201ENST00000359785 PIGHQ14442 188 aaPredicted RBP4.66□□□□□ -1.66
PTPN22-201ENST00000359785 PHKG1Q16816 387 aa4.66□□□□□ -1.66
PTPN22-201ENST00000359785 AOC3Q16853 763 aa4.66□□□□□ -1.66
PTPN22-201ENST00000359785 TBC1D10BQ4KMP7 808 aaPredicted RBP4.66□□□□□ -1.66
PTPN22-201ENST00000359785 CEP78Q5JTW2 689 aa4.66□□□□□ -1.66
PTPN22-201ENST00000359785 SLC9A4Q6AI14 798 aa4.66□□□□□ -1.66
PTPN22-201ENST00000359785 KDM4DQ6B0I6 523 aa4.66□□□□□ -1.66
PTPN22-201ENST00000359785 LCN8Q6JVE9 175 aa4.66□□□□□ -1.66
PTPN22-201ENST00000359785 LVRNQ6Q4G3 990 aa4.66□□□□□ -1.66
PTPN22-201ENST00000359785 SLC26A11Q86WA9 606 aa4.66□□□□□ -1.66
PTPN22-201ENST00000359785 CPT1BQ92523 772 aa4.66□□□□□ -1.66
PTPN22-201ENST00000359785 STMN2Q93045 179 aa4.66□□□□□ -1.66
PTPN22-201ENST00000359785 ANKRD36BP1Q96IX9 119 aa4.66□□□□□ -1.66
PTPN22-201ENST00000359785 MAGED4Q96JG8 741 aa4.66□□□□□ -1.66
PTPN22-201ENST00000359785 PPP1R10Q96QC0 940 aaKnown RBP4.66□□□□□ -1.66
PTPN22-201ENST00000359785 NAT9Q9BTE0 207 aa4.66□□□□□ -1.66
PTPN22-201ENST00000359785 RPF2Q9H7B2 306 aaKnown RBP4.66□□□□□ -1.66
PTPN22-201ENST00000359785 JMJD4Q9H9V9 463 aa4.66□□□□□ -1.66
PTPN22-201ENST00000359785 ANKEF1Q9NU02 776 aa4.66□□□□□ -1.66
PTPN22-201ENST00000359785 EMCNQ9ULC0 261 aa4.66□□□□□ -1.66
PTPN22-201ENST00000359785 WASF2Q9Y6W5 498 aa4.66□□□□□ -1.66
PTPN22-201ENST00000359785 HMX2A2RU54 273 aa4.66□□□□□ -1.66
PTPN22-201ENST00000359785 RSPH10B2B2RC85 870 aa4.66□□□□□ -1.66
PTPN22-201ENST00000359785 H0YCG3 227 aa4.66□□□□□ -1.66
PTPN22-201ENST00000359785 TRAF5O00463 557 aa4.66□□□□□ -1.66
PTPN22-201ENST00000359785 FBP2O00757 339 aa4.66□□□□□ -1.66
PTPN22-201ENST00000359785 AQP9O43315 295 aa4.66□□□□□ -1.66
PTPN22-201ENST00000359785 DFNA5O60443 496 aa4.66□□□□□ -1.66
PTPN22-201ENST00000359785 CBX6O95503 412 aa4.66□□□□□ -1.66
PTPN22-201ENST00000359785 KRT6AP02538 564 aa4.66□□□□□ -1.66
PTPN22-201ENST00000359785 KRT6BP04259 564 aa4.66□□□□□ -1.66
PTPN22-201ENST00000359785 MSL3P1P0C860 447 aa4.66□□□□□ -1.66
PTPN22-201ENST00000359785 RSPH10BP0C881 870 aa4.66□□□□□ -1.66
PTPN22-201ENST00000359785 THRAP10827 490 aa4.66□□□□□ -1.66
PTPN22-201ENST00000359785 TGM2P21980 687 aa4.66□□□□□ -1.66
PTPN22-201ENST00000359785 MMP8P22894 467 aa4.66□□□□□ -1.66
PTPN22-201ENST00000359785 BMP8BP34820 402 aa4.66□□□□□ -1.66
PTPN22-201ENST00000359785 TKTL1P51854 596 aa4.66□□□□□ -1.66
PTPN22-201ENST00000359785 AQP4P55087 323 aa4.66□□□□□ -1.66
PTPN22-201ENST00000359785 SESN3P58005 492 aa4.66□□□□□ -1.66
PTPN22-201ENST00000359785 NFKB2Q00653 900 aa4.66□□□□□ -1.66
PTPN22-201ENST00000359785 ZNF252P-AS1Q0IIN9 211 aa4.66□□□□□ -1.66
PTPN22-201ENST00000359785 HIC1Q14526 733 aa4.66□□□□□ -1.66
PTPN22-201ENST00000359785 SGO2Q562F6 1265 aa4.66□□□□□ -1.66
PTPN22-201ENST00000359785 MTX3Q5HYI7 312 aa4.66□□□□□ -1.66
PTPN22-201ENST00000359785 RARS2Q5T160 578 aaKnown RBP4.66□□□□□ -1.66
PTPN22-201ENST00000359785 CYP4V2Q6ZWL3 525 aaPredicted RBP4.66□□□□□ -1.66
PTPN22-201ENST00000359785 BMP8AQ7Z5Y6 402 aa4.66□□□□□ -1.66
PTPN22-201ENST00000359785 ZNF598Q86UK7 904 aaKnown RBP4.66□□□□□ -1.66
PTPN22-201ENST00000359785 SATL1Q86VE3 508 aa4.66□□□□□ -1.66
PTPN22-201ENST00000359785 MCF2L2Q86YR7 1114 aa4.66□□□□□ -1.66
PTPN22-201ENST00000359785 PDCD7Q8N8D1 485 aaKnown RBP4.66□□□□□ -1.66
PTPN22-201ENST00000359785 GLIS3Q8NEA6 775 aa4.66□□□□□ -1.66
PTPN22-201ENST00000359785 NUP210Q8TEM1 1887 aaPredicted RBP4.66□□□□□ -1.66
PTPN22-201ENST00000359785 ISOC1Q96CN7 298 aa4.66□□□□□ -1.66
PTPN22-201ENST00000359785 CCDC17Q96LX7 622 aa4.66□□□□□ -1.66
PTPN22-201ENST00000359785 RBM15Q96T37 977 aaKnown RBP eCLIP4.66□□□□□ -1.66
PTPN22-201ENST00000359785 NPLQ9BXD5 320 aaPredicted RBP4.66□□□□□ -1.66
PTPN22-201ENST00000359785 HEY2Q9UBP5 337 aa4.66□□□□□ -1.66
PTPN22-201ENST00000359785 WBP11Q9Y2W2 641 aaKnown RBP4.66□□□□□ -1.66
PTPN22-201ENST00000359785 AP4S1Q9Y587 144 aa4.66□□□□□ -1.66
PTPN22-201ENST00000359785 PCDHB13Q9Y5F0 798 aa4.66□□□□□ -1.66
PTPN22-201ENST00000359785 A0A087WXM4 84 aa4.66□□□□□ -1.66
PTPN22-201ENST00000359785 TCRBV7S2A1N4TA0A589 114 aa4.66□□□□□ -1.66
PTPN22-201ENST00000359785 TAF4O00268 1085 aa4.66□□□□□ -1.66
PTPN22-201ENST00000359785 DYNC1LI2O43237 492 aaPredicted RBP4.66□□□□□ -1.66
PTPN22-201ENST00000359785 AKAP10O43572 662 aa4.66□□□□□ -1.66
PTPN22-201ENST00000359785 NPHS1O60500 1241 aa4.66□□□□□ -1.66
PTPN22-201ENST00000359785 ITIH1P19827 911 aa4.66□□□□□ -1.66
PTPN22-201ENST00000359785 GMPRP36959 345 aa4.66□□□□□ -1.66
PTPN22-201ENST00000359785 CRKLP46109 303 aaKnown RBP4.66□□□□□ -1.66
PTPN22-201ENST00000359785 ALDH1A3P47895 512 aa4.66□□□□□ -1.66
PTPN22-201ENST00000359785 MARCKSL1P49006 195 aa4.66□□□□□ -1.66
PTPN22-201ENST00000359785 CXCR4P61073 352 aa4.66□□□□□ -1.66
PTPN22-201ENST00000359785 BST2Q10589 180 aaKnown RBP4.66□□□□□ -1.66
PTPN22-201ENST00000359785 PSMD6Q15008 389 aa4.66□□□□□ -1.66
PTPN22-201ENST00000359785 SMU1Q2TAY7 513 aa4.66□□□□□ -1.66
PTPN22-201ENST00000359785 RBM48Q5RL73 367 aaKnown RBP4.66□□□□□ -1.66
PTPN22-201ENST00000359785 TMEM53Q6P2H8 277 aa4.66□□□□□ -1.66
PTPN22-201ENST00000359785 C19orf48Q6RUI8 117 aa4.66□□□□□ -1.66
PTPN22-201ENST00000359785 ZNF534Q76KX8 674 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms