RNA–Protein interactions for RNA: ENST00000359541.6

GTF3C2-202, Transcript of general transcription factor IIIC subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C2, Length 3,992 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-202ENST00000359541 KATNBL1Q9H079 304 aa9.62□□□□□ -0.87
GTF3C2-202ENST00000359541 SEPT10Q9P0V9 454 aa9.62□□□□□ -0.87
GTF3C2-202ENST00000359541 MCM3APO60318 1980 aa9.62□□□□□ -0.87
GTF3C2-202ENST00000359541 SDR42E2A6NKP2 422 aa9.62□□□□□ -0.87
GTF3C2-202ENST00000359541 PIRO00625 290 aa9.62□□□□□ -0.87
GTF3C2-202ENST00000359541 PPEF2O14830 753 aa9.62□□□□□ -0.87
GTF3C2-202ENST00000359541 GPR32O75388 356 aa9.62□□□□□ -0.87
GTF3C2-202ENST00000359541 AIF1P55008 147 aa9.62□□□□□ -0.87
GTF3C2-202ENST00000359541 ADIGQ0VDE8 80 aa9.62□□□□□ -0.87
GTF3C2-202ENST00000359541 CA9Q16790 459 aa9.62□□□□□ -0.87
GTF3C2-202ENST00000359541 CGB2Q6NT52 195 aa9.62□□□□□ -0.87
GTF3C2-202ENST00000359541 TRNP1Q6NT89 227 aa9.62□□□□□ -0.87
GTF3C2-202ENST00000359541 FAM131BQ86XD5 332 aa9.62□□□□□ -0.87
GTF3C2-202ENST00000359541 NUDCD3Q8IVD9 361 aa9.62□□□□□ -0.87
GTF3C2-202ENST00000359541 DEFB106AQ8N104 65 aa9.62□□□□□ -0.87
GTF3C2-202ENST00000359541 C10orf82Q8WW14 230 aa9.62□□□□□ -0.87
GTF3C2-202ENST00000359541 PCDHA11Q9Y5I1 949 aa9.62□□□□□ -0.87
GTF3C2-202ENST00000359541 SYNJ2BP-COX16A0A087WUM0 186 aa9.61□□□□□ -0.87
GTF3C2-202ENST00000359541 MTSS1O43312 755 aa9.61□□□□□ -0.87
GTF3C2-202ENST00000359541 CCDC22O60826 627 aa9.61□□□□□ -0.87
GTF3C2-202ENST00000359541 LMNAP02545 664 aaKnown RBP9.61□□□□□ -0.87
GTF3C2-202ENST00000359541 NPR3P17342 541 aa9.61□□□□□ -0.87
GTF3C2-202ENST00000359541 WARSP23381 471 aaKnown RBP9.61□□□□□ -0.87
GTF3C2-202ENST00000359541 PRKCHP24723 683 aa9.61□□□□□ -0.87
GTF3C2-202ENST00000359541 TARSP26639 723 aaKnown RBP9.61□□□□□ -0.87
GTF3C2-202ENST00000359541 TAF2Q6P1X5 1199 aa9.61□□□□□ -0.87
GTF3C2-202ENST00000359541 PIGZQ86VD9 579 aa9.61□□□□□ -0.87
GTF3C2-202ENST00000359541 RAB3IL1Q8TBN0 382 aa9.61□□□□□ -0.87
GTF3C2-202ENST00000359541 CENPIQ92674 756 aaPredicted RBP9.61□□□□□ -0.87
GTF3C2-202ENST00000359541 TMEM237Q96Q45 408 aa9.61□□□□□ -0.87
GTF3C2-202ENST00000359541 HNRNPABQ99729 332 aaKnown RBP9.61□□□□□ -0.87
GTF3C2-202ENST00000359541 DUSP16Q9BY84 665 aa9.61□□□□□ -0.87
GTF3C2-202ENST00000359541 DPEP3Q9H4B8 488 aa9.61□□□□□ -0.87
GTF3C2-202ENST00000359541 POPDC2Q9HBU9 364 aa9.61□□□□□ -0.87
GTF3C2-202ENST00000359541 COX16Q9P0S2 106 aa9.61□□□□□ -0.87
GTF3C2-202ENST00000359541 EEF2KO00418 725 aaKnown RBP9.61□□□□□ -0.87
GTF3C2-202ENST00000359541 CYB561D2O14569 222 aa9.61□□□□□ -0.87
GTF3C2-202ENST00000359541 CREB3O43889 395 aa9.61□□□□□ -0.87
GTF3C2-202ENST00000359541 AVILO75366 819 aa9.61□□□□□ -0.87
GTF3C2-202ENST00000359541 WFS1O76024 890 aa9.61□□□□□ -0.87
GTF3C2-202ENST00000359541 IL4RP24394 825 aa9.61□□□□□ -0.87
GTF3C2-202ENST00000359541 GBE1Q04446 702 aa9.61□□□□□ -0.87
GTF3C2-202ENST00000359541 MAP2K5Q13163 448 aa9.61□□□□□ -0.87
GTF3C2-202ENST00000359541 CBLBQ13191 982 aa9.61□□□□□ -0.87
GTF3C2-202ENST00000359541 SEMA5AQ13591 1074 aa9.61□□□□□ -0.87
GTF3C2-202ENST00000359541 TAF1BQ53T94 588 aaPredicted RBP9.61□□□□□ -0.87
GTF3C2-202ENST00000359541 C6orf163Q5TEZ5 329 aa9.61□□□□□ -0.87
GTF3C2-202ENST00000359541 CHADLQ6NUI6 762 aa9.61□□□□□ -0.87
GTF3C2-202ENST00000359541 CYP4V2Q6ZWL3 525 aaPredicted RBP9.61□□□□□ -0.87
GTF3C2-202ENST00000359541 TMEM130Q8N3G9 435 aa9.61□□□□□ -0.87
GTF3C2-202ENST00000359541 E2F7Q96AV8 911 aa9.61□□□□□ -0.87
GTF3C2-202ENST00000359541 KCTD15Q96SI1 283 aaPredicted RBP9.61□□□□□ -0.87
GTF3C2-202ENST00000359541 WWP1Q9H0M0 922 aa9.61□□□□□ -0.87
GTF3C2-202ENST00000359541 FAM96AQ9H5X1 160 aa9.61□□□□□ -0.87
GTF3C2-202ENST00000359541 ALG13Q9NP73 1137 aaKnown RBP9.61□□□□□ -0.87
GTF3C2-202ENST00000359541 RRN3Q9NYV6 651 aa9.61□□□□□ -0.87
GTF3C2-202ENST00000359541 SLC17A7Q9P2U7 560 aa9.61□□□□□ -0.87
GTF3C2-202ENST00000359541 RPL26L1Q9UNX3 145 aaKnown RBP9.61□□□□□ -0.87
GTF3C2-202ENST00000359541 CHKBQ9Y259 395 aa9.61□□□□□ -0.87
GTF3C2-202ENST00000359541 TTLL3Q9Y4R7 772 aa9.61□□□□□ -0.87
GTF3C2-202ENST00000359541 MBLAC1A4D2B0 266 aaPredicted RBP9.61□□□□□ -0.87
GTF3C2-202ENST00000359541 M0QYT0 321 aa9.61□□□□□ -0.87
GTF3C2-202ENST00000359541 NCAM2O15394 837 aa9.61□□□□□ -0.87
GTF3C2-202ENST00000359541 ATP5BP06576 529 aaKnown RBP9.61□□□□□ -0.87
GTF3C2-202ENST00000359541 AMPD1P23109 780 aa9.61□□□□□ -0.87
GTF3C2-202ENST00000359541 PTPN4P29074 926 aa9.61□□□□□ -0.87
GTF3C2-202ENST00000359541 LHX1P48742 406 aa9.61□□□□□ -0.87
GTF3C2-202ENST00000359541 ZNF135P52742 658 aaPredicted RBP9.61□□□□□ -0.87
GTF3C2-202ENST00000359541 PDE1BQ01064 536 aa9.61□□□□□ -0.87
GTF3C2-202ENST00000359541 DBN1Q16643 649 aa9.61□□□□□ -0.87
GTF3C2-202ENST00000359541 BSPRYQ5W0U4 402 aa9.61□□□□□ -0.87
GTF3C2-202ENST00000359541 DSTYKQ6XUX3 929 aa9.61□□□□□ -0.87
GTF3C2-202ENST00000359541 DENND5BQ6ZUT9 1274 aa9.61□□□□□ -0.87
GTF3C2-202ENST00000359541 RNF139Q8WU17 664 aa9.61□□□□□ -0.87
GTF3C2-202ENST00000359541 TRIM62Q9BVG3 475 aa9.61□□□□□ -0.87
GTF3C2-202ENST00000359541 SLC13A1Q9BZW2 595 aa9.61□□□□□ -0.87
GTF3C2-202ENST00000359541 EIF2B3Q9NR50 452 aaKnown RBP9.61□□□□□ -0.87
GTF3C2-202ENST00000359541 KLHL8Q9P2G9 620 aaPredicted RBP9.61□□□□□ -0.87
GTF3C2-202ENST00000359541 HAO1Q9UJM8 370 aa9.61□□□□□ -0.87
GTF3C2-202ENST00000359541 GRID1Q9ULK0 1009 aa9.61□□□□□ -0.87
GTF3C2-202ENST00000359541 RAD54BQ9Y620 910 aa9.61□□□□□ -0.87
GTF3C2-202ENST00000359541 KAT6AQ92794 2004 aa9.61□□□□□ -0.87
GTF3C2-202ENST00000359541 KRT16P08779 473 aa9.6□□□□□ -0.87
GTF3C2-202ENST00000359541 MX2P20592 715 aa9.6□□□□□ -0.87
GTF3C2-202ENST00000359541 SERPINB6P35237 376 aa9.6□□□□□ -0.87
GTF3C2-202ENST00000359541 NEK3P51956 506 aa9.6□□□□□ -0.87
GTF3C2-202ENST00000359541 NRLP54845 237 aa9.6□□□□□ -0.87
GTF3C2-202ENST00000359541 MRPS5P82675 430 aaKnown RBP9.6□□□□□ -0.87
GTF3C2-202ENST00000359541 NME3Q13232 169 aa9.6□□□□□ -0.87
GTF3C2-202ENST00000359541 ANKRD20A2Q5SQ80 823 aa9.6□□□□□ -0.87
GTF3C2-202ENST00000359541 ANKRD20A1Q5TYW2 823 aa9.6□□□□□ -0.87
GTF3C2-202ENST00000359541 UNC5AQ6ZN44 842 aa9.6□□□□□ -0.87
GTF3C2-202ENST00000359541 FAM228AQ86W67 206 aa9.6□□□□□ -0.87
GTF3C2-202ENST00000359541 NDUFAF2Q8N183 169 aa9.6□□□□□ -0.87
GTF3C2-202ENST00000359541 TMEM86AQ8N2M4 240 aa9.6□□□□□ -0.87
GTF3C2-202ENST00000359541 COLGALT1Q8NBJ5 622 aa9.6□□□□□ -0.87
GTF3C2-202ENST00000359541 MS4A4AQ96JQ5 239 aa9.6□□□□□ -0.87
GTF3C2-202ENST00000359541 BRD8Q9H0E9 1235 aa9.6□□□□□ -0.87
GTF3C2-202ENST00000359541 SF3B1O75533 1304 aaKnown RBP eCLIP9.6□□□□□ -0.87
GTF3C2-202ENST00000359541 AP3B1O00203 1094 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms