RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 PCDH19Q8TAB3 1148 aa5.28□□□□□ -1.56
ATXN3-202ENST00000359366 FAM71BQ8TC56 605 aa5.28□□□□□ -1.56
ATXN3-202ENST00000359366 MICAL1Q8TDZ2 1067 aa5.28□□□□□ -1.56
ATXN3-202ENST00000359366 EPS8L3Q8TE67 593 aaKnown RBP5.28□□□□□ -1.56
ATXN3-202ENST00000359366 RUBCNQ92622 972 aa5.28□□□□□ -1.56
ATXN3-202ENST00000359366 ART4Q93070 314 aa5.28□□□□□ -1.56
ATXN3-202ENST00000359366 WNT2BQ93097 391 aa5.28□□□□□ -1.56
ATXN3-202ENST00000359366 PGBD4Q96DM1 585 aa5.28□□□□□ -1.56
ATXN3-202ENST00000359366 SNF8Q96H20 258 aa5.28□□□□□ -1.56
ATXN3-202ENST00000359366 C9orf72Q96LT7 481 aa5.28□□□□□ -1.56
ATXN3-202ENST00000359366 KCTD15Q96SI1 283 aaPredicted RBP5.28□□□□□ -1.56
ATXN3-202ENST00000359366 CFHR5Q9BXR6 569 aa5.28□□□□□ -1.56
ATXN3-202ENST00000359366 MAK16Q9BXY0 300 aaKnown RBP5.28□□□□□ -1.56
ATXN3-202ENST00000359366 CEP41Q9BYV8 373 aa5.28□□□□□ -1.56
ATXN3-202ENST00000359366 PCDH18Q9HCL0 1135 aa5.28□□□□□ -1.56
ATXN3-202ENST00000359366 DDX56Q9NY93 547 aaKnown RBP5.28□□□□□ -1.56
ATXN3-202ENST00000359366 ABI2Q9NYB9 513 aaPredicted RBP5.28□□□□□ -1.56
ATXN3-202ENST00000359366 ANAPC5Q9UJX4 755 aa5.28□□□□□ -1.56
ATXN3-202ENST00000359366 ITGB1BP2Q9UKP3 347 aa5.28□□□□□ -1.56
ATXN3-202ENST00000359366 PHF24Q9UPV7 400 aa5.28□□□□□ -1.56
ATXN3-202ENST00000359366 NEU2Q9Y3R4 380 aa5.28□□□□□ -1.56
ATXN3-202ENST00000359366 NFS1Q9Y697 457 aa5.28□□□□□ -1.56
ATXN3-202ENST00000359366 FAM72CH0Y354 149 aa5.28□□□□□ -1.56
ATXN3-202ENST00000359366 H7C0C1 242 aa5.28□□□□□ -1.56
ATXN3-202ENST00000359366 ENPP3O14638 875 aa5.28□□□□□ -1.56
ATXN3-202ENST00000359366 CHUKO15111 745 aa5.28□□□□□ -1.56
ATXN3-202ENST00000359366 NCAM1P13591 858 aa5.28□□□□□ -1.56
ATXN3-202ENST00000359366 CETN2P41208 172 aa5.28□□□□□ -1.56
ATXN3-202ENST00000359366 ATP5OP48047 213 aa5.28□□□□□ -1.56
ATXN3-202ENST00000359366 LHX1P48742 406 aa5.28□□□□□ -1.56
ATXN3-202ENST00000359366 CDK7P50613 346 aa5.28□□□□□ -1.56
ATXN3-202ENST00000359366 RAB27AP51159 221 aa5.28□□□□□ -1.56
ATXN3-202ENST00000359366 YWHAZP63104 245 aaKnown RBP5.28□□□□□ -1.56
ATXN3-202ENST00000359366 MRPS5P82675 430 aaKnown RBP5.28□□□□□ -1.56
ATXN3-202ENST00000359366 IFFO1Q0D2I5 559 aa5.28□□□□□ -1.56
ATXN3-202ENST00000359366 SLC10A2Q12908 348 aaPredicted RBP5.28□□□□□ -1.56
ATXN3-202ENST00000359366 CLUL1Q15846 466 aa5.28□□□□□ -1.56
ATXN3-202ENST00000359366 KYNUQ16719 465 aa5.28□□□□□ -1.56
ATXN3-202ENST00000359366 DDR2Q16832 855 aa5.28□□□□□ -1.56
ATXN3-202ENST00000359366 TRIM60Q495X7 471 aa5.28□□□□□ -1.56
ATXN3-202ENST00000359366 ANKRD20A8PQ5CZ79 823 aa5.28□□□□□ -1.56
ATXN3-202ENST00000359366 FAM72AQ5TYM5 149 aa5.28□□□□□ -1.56
ATXN3-202ENST00000359366 FAM72DQ6L9T8 149 aa5.28□□□□□ -1.56
ATXN3-202ENST00000359366 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.28□□□□□ -1.56
ATXN3-202ENST00000359366 SLC26A9Q7LBE3 791 aa5.28□□□□□ -1.56
ATXN3-202ENST00000359366 SPATA21Q7Z572 469 aa5.28□□□□□ -1.56
ATXN3-202ENST00000359366 POLNQ7Z5Q5 900 aa5.28□□□□□ -1.56
ATXN3-202ENST00000359366 FAM72BQ86X60 149 aa5.28□□□□□ -1.56
ATXN3-202ENST00000359366 MICALL1Q8N3F8 863 aa5.28□□□□□ -1.56
ATXN3-202ENST00000359366 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.28□□□□□ -1.56
ATXN3-202ENST00000359366 ALLCQ8N6M5 410 aa5.28□□□□□ -1.56
ATXN3-202ENST00000359366 PLD5Q8N7P1 536 aa5.28□□□□□ -1.56
ATXN3-202ENST00000359366 MYCBPAPQ8TBZ2 947 aa5.28□□□□□ -1.56
ATXN3-202ENST00000359366 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.28□□□□□ -1.56
ATXN3-202ENST00000359366 TXLNGYQ9BZA5 131 aa5.28□□□□□ -1.56
ATXN3-202ENST00000359366 GPR62Q9BZJ7 368 aa5.28□□□□□ -1.56
ATXN3-202ENST00000359366 ACBD3Q9H3P7 528 aa5.28□□□□□ -1.56
ATXN3-202ENST00000359366 PIGVQ9NUD9 493 aa5.28□□□□□ -1.56
ATXN3-202ENST00000359366 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.28□□□□□ -1.56
ATXN3-202ENST00000359366 CTNNAL1Q9UBT7 734 aa5.28□□□□□ -1.56
ATXN3-202ENST00000359366 AP4E1Q9UPM8 1137 aa5.28□□□□□ -1.56
ATXN3-202ENST00000359366 ATP11BQ9Y2G3 1177 aa5.28□□□□□ -1.56
ATXN3-202ENST00000359366 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.28□□□□□ -1.56
ATXN3-202ENST00000359366 PRRC2BQ5JSZ5 2229 aaKnown RBP5.28□□□□□ -1.56
ATXN3-202ENST00000359366 SHROOM3Q8TF72 1996 aa5.28□□□□□ -1.56
ATXN3-202ENST00000359366 TBKBP1A7MCY6 615 aa5.27□□□□□ -1.57
ATXN3-202ENST00000359366 HHLA1C9JL84 531 aa5.27□□□□□ -1.57
ATXN3-202ENST00000359366 PDLIM1O00151 329 aa5.27□□□□□ -1.57
ATXN3-202ENST00000359366 C2CD2LO14523 706 aa5.27□□□□□ -1.57
ATXN3-202ENST00000359366 CAPN9O14815 690 aa5.27□□□□□ -1.57
ATXN3-202ENST00000359366 MSI1O43347 362 aaKnown RBP5.27□□□□□ -1.57
ATXN3-202ENST00000359366 RBP3P10745 1247 aa5.27□□□□□ -1.57
ATXN3-202ENST00000359366 RPL17P18621 184 aaKnown RBP5.27□□□□□ -1.57
ATXN3-202ENST00000359366 L1CAMP32004 1257 aa5.27□□□□□ -1.57
ATXN3-202ENST00000359366 RPL9P32969 192 aaKnown RBP5.27□□□□□ -1.57
ATXN3-202ENST00000359366 GCKP35557 465 aa5.27□□□□□ -1.57
ATXN3-202ENST00000359366 PCK1P35558 622 aa5.27□□□□□ -1.57
ATXN3-202ENST00000359366 GRIK1P39086 918 aa5.27□□□□□ -1.57
ATXN3-202ENST00000359366 MATKP42679 507 aa5.27□□□□□ -1.57
ATXN3-202ENST00000359366 GJA8P48165 433 aa5.27□□□□□ -1.57
ATXN3-202ENST00000359366 TLE2Q04725 743 aa5.27□□□□□ -1.57
ATXN3-202ENST00000359366 YWHAHQ04917 246 aaPredicted RBP5.27□□□□□ -1.57
ATXN3-202ENST00000359366 SF3A3Q12874 501 aaKnown RBP eCLIP5.27□□□□□ -1.57
ATXN3-202ENST00000359366 SMAD1Q15797 465 aaKnown RBP5.27□□□□□ -1.57
ATXN3-202ENST00000359366 PPP2R5EQ16537 467 aa5.27□□□□□ -1.57
ATXN3-202ENST00000359366 LONRF1Q17RB8 773 aa5.27□□□□□ -1.57
ATXN3-202ENST00000359366 KRT71Q3SY84 523 aa5.27□□□□□ -1.57
ATXN3-202ENST00000359366 INTS6LQ5JSJ4 861 aaKnown RBP5.27□□□□□ -1.57
ATXN3-202ENST00000359366 FAM171A1Q5VUB5 890 aa5.27□□□□□ -1.57
ATXN3-202ENST00000359366 ALS2CLQ60I27 953 aa5.27□□□□□ -1.57
ATXN3-202ENST00000359366 DARS2Q6PI48 645 aaKnown RBP5.27□□□□□ -1.57
ATXN3-202ENST00000359366 RSPO2Q6UXX9 243 aaPredicted RBP5.27□□□□□ -1.57
ATXN3-202ENST00000359366 MICALCLQ6ZW33 695 aa5.27□□□□□ -1.57
ATXN3-202ENST00000359366 BBS12Q6ZW61 710 aa5.27□□□□□ -1.57
ATXN3-202ENST00000359366 METTL23Q86XA0 190 aa5.27□□□□□ -1.57
ATXN3-202ENST00000359366 ANKMY2Q8IV38 441 aa5.27□□□□□ -1.57
ATXN3-202ENST00000359366 COLGALT2Q8IYK4 626 aa5.27□□□□□ -1.57
ATXN3-202ENST00000359366 MREGQ8N565 214 aa5.27□□□□□ -1.57
ATXN3-202ENST00000359366 ATAD1Q8NBU5 361 aa5.27□□□□□ -1.57
ATXN3-202ENST00000359366 SLC35B2Q8TB61 432 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms