RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 IER5LQ5T953 404 aa14.39□□□□□ -0.11
PDLIM5-203ENST00000359265 WDR93Q6P2C0 686 aa14.39□□□□□ -0.11
PDLIM5-203ENST00000359265 BBS12Q6ZW61 710 aa14.39□□□□□ -0.11
PDLIM5-203ENST00000359265 TMC7Q7Z402 723 aa14.39□□□□□ -0.11
PDLIM5-203ENST00000359265 SPRED2Q7Z698 418 aa14.39□□□□□ -0.11
PDLIM5-203ENST00000359265 ANKS1BQ7Z6G8 1248 aa14.39□□□□□ -0.11
PDLIM5-203ENST00000359265 MON1AQ86VX9 555 aa14.39□□□□□ -0.11
PDLIM5-203ENST00000359265 FAM131BQ86XD5 332 aa14.39□□□□□ -0.11
PDLIM5-203ENST00000359265 RFX6Q8HWS3 928 aa14.39□□□□□ -0.11
PDLIM5-203ENST00000359265 ZDHHC14Q8IZN3 488 aa14.39□□□□□ -0.11
PDLIM5-203ENST00000359265 TTC13Q8NBP0 860 aa14.39□□□□□ -0.11
PDLIM5-203ENST00000359265 ZNF461Q8TAF7 563 aa14.39□□□□□ -0.11
PDLIM5-203ENST00000359265 RNF139Q8WU17 664 aa14.39□□□□□ -0.11
PDLIM5-203ENST00000359265 EDEM1Q92611 657 aa14.39□□□□□ -0.11
PDLIM5-203ENST00000359265 FBXO32Q969P5 355 aa14.39□□□□□ -0.11
PDLIM5-203ENST00000359265 NTAN1Q96AB6 310 aa14.39□□□□□ -0.11
PDLIM5-203ENST00000359265 PNKPQ96T60 521 aa14.39□□□□□ -0.11
PDLIM5-203ENST00000359265 ZNF670Q9BS34 389 aa14.39□□□□□ -0.11
PDLIM5-203ENST00000359265 C17orf80Q9BSJ5 609 aa14.39□□□□□ -0.11
PDLIM5-203ENST00000359265 ADAM33Q9BZ11 813 aa14.39□□□□□ -0.11
PDLIM5-203ENST00000359265 DCLK3Q9C098 648 aa14.39□□□□□ -0.11
PDLIM5-203ENST00000359265 CRISPLD1Q9H336 500 aa14.39□□□□□ -0.11
PDLIM5-203ENST00000359265 DHX35Q9H5Z1 703 aaKnown RBP14.39□□□□□ -0.11
PDLIM5-203ENST00000359265 LRRC19Q9H756 370 aa14.39□□□□□ -0.11
PDLIM5-203ENST00000359265 ENTPD7Q9NQZ7 604 aa14.39□□□□□ -0.11
PDLIM5-203ENST00000359265 TLR9Q9NR96 1032 aa14.39□□□□□ -0.11
PDLIM5-203ENST00000359265 DDIT4Q9NX09 232 aa14.39□□□□□ -0.11
PDLIM5-203ENST00000359265 COX16Q9P0S2 106 aa14.39□□□□□ -0.11
PDLIM5-203ENST00000359265 PCYOX1Q9UHG3 505 aa14.39□□□□□ -0.11
PDLIM5-203ENST00000359265 RASAL2Q9UJF2 1139 aa14.39□□□□□ -0.11
PDLIM5-203ENST00000359265 MAFFQ9ULX9 164 aa14.39□□□□□ -0.11
PDLIM5-203ENST00000359265 DENND4CQ5VZ89 1909 aa14.39□□□□□ -0.11
PDLIM5-203ENST00000359265 A0A1W2PQH9 124 aa14.38□□□□□ -0.11
PDLIM5-203ENST00000359265 FAM92AA1XBS5 289 aa14.38□□□□□ -0.11
PDLIM5-203ENST00000359265 ERLIN1O75477 346 aa14.38□□□□□ -0.11
PDLIM5-203ENST00000359265 SOAT2O75908 522 aa14.38□□□□□ -0.11
PDLIM5-203ENST00000359265 IL9P15248 144 aa14.38□□□□□ -0.11
PDLIM5-203ENST00000359265 COILP38432 576 aaPredicted RBP14.38□□□□□ -0.11
PDLIM5-203ENST00000359265 ATXN1P54253 815 aaKnown RBP14.38□□□□□ -0.11
PDLIM5-203ENST00000359265 DR1Q01658 176 aa14.38□□□□□ -0.11
PDLIM5-203ENST00000359265 DPYSL3Q14195 570 aa14.38□□□□□ -0.11
PDLIM5-203ENST00000359265 DPYSL2Q16555 572 aa14.38□□□□□ -0.11
PDLIM5-203ENST00000359265 ARL13BQ3SXY8 428 aa14.38□□□□□ -0.11
PDLIM5-203ENST00000359265 ZC3H12AQ5D1E8 599 aaKnown RBP14.38□□□□□ -0.11
PDLIM5-203ENST00000359265 EFHC2Q5JST6 749 aa14.38□□□□□ -0.11
PDLIM5-203ENST00000359265 PDE12Q6L8Q7 609 aaKnown RBP14.38□□□□□ -0.11
PDLIM5-203ENST00000359265 MSANTD2Q6P1R3 559 aa14.38□□□□□ -0.11
PDLIM5-203ENST00000359265 CCDC137Q6PK04 289 aaKnown RBP14.38□□□□□ -0.11
PDLIM5-203ENST00000359265 TAC4Q86UU9 113 aa14.38□□□□□ -0.11
PDLIM5-203ENST00000359265 CCDC185Q8N715 623 aa14.38□□□□□ -0.11
PDLIM5-203ENST00000359265 FAM71BQ8TC56 605 aa14.38□□□□□ -0.11
PDLIM5-203ENST00000359265 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.38□□□□□ -0.11
PDLIM5-203ENST00000359265 DQX1Q8TE96 717 aaKnown RBP14.38□□□□□ -0.11
PDLIM5-203ENST00000359265 GRK7Q8WTQ7 553 aa14.38□□□□□ -0.11
PDLIM5-203ENST00000359265 TCF25Q9BQ70 676 aa14.38□□□□□ -0.11
PDLIM5-203ENST00000359265 EMILIN2Q9BXX0 1053 aa14.38□□□□□ -0.11
PDLIM5-203ENST00000359265 MAK16Q9BXY0 300 aaKnown RBP14.38□□□□□ -0.11
PDLIM5-203ENST00000359265 FRMD8P1Q9BZ68 369 aaPredicted RBP14.38□□□□□ -0.11
PDLIM5-203ENST00000359265 RAB17Q9H0T7 212 aa14.38□□□□□ -0.11
PDLIM5-203ENST00000359265 SMOC2Q9H3U7 446 aa14.38□□□□□ -0.11
PDLIM5-203ENST00000359265 RXFP1Q9HBX9 757 aa14.38□□□□□ -0.11
PDLIM5-203ENST00000359265 PCDH18Q9HCL0 1135 aa14.38□□□□□ -0.11
PDLIM5-203ENST00000359265 TLR8Q9NR97 1041 aaKnown RBP14.38□□□□□ -0.11
PDLIM5-203ENST00000359265 PIGVQ9NUD9 493 aa14.38□□□□□ -0.11
PDLIM5-203ENST00000359265 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.38□□□□□ -0.11
PDLIM5-203ENST00000359265 GMIPQ9P107 970 aa14.38□□□□□ -0.11
PDLIM5-203ENST00000359265 AMACRQ9UHK6 382 aa14.38□□□□□ -0.11
PDLIM5-203ENST00000359265 FZD10Q9ULW2 581 aa14.38□□□□□ -0.11
PDLIM5-203ENST00000359265 IRAK3Q9Y616 596 aa14.38□□□□□ -0.11
PDLIM5-203ENST00000359265 SPTBN4Q9H254 2564 aa14.37□□□□□ -0.11
PDLIM5-203ENST00000359265 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.37□□□□□ -0.11
PDLIM5-203ENST00000359265 CCDC151A5D8V7 595 aa14.37□□□□□ -0.11
PDLIM5-203ENST00000359265 SLC38A8A6NNN8 435 aa14.37□□□□□ -0.11
PDLIM5-203ENST00000359265 CST8O60676 142 aa14.37□□□□□ -0.11
PDLIM5-203ENST00000359265 CXCL14O95715 111 aa14.37□□□□□ -0.11
PDLIM5-203ENST00000359265 ADH1AP07327 375 aa14.37□□□□□ -0.11
PDLIM5-203ENST00000359265 CD48P09326 243 aa14.37□□□□□ -0.11
PDLIM5-203ENST00000359265 ATF2P15336 505 aa14.37□□□□□ -0.11
PDLIM5-203ENST00000359265 H2AFXP16104 143 aaPredicted RBP14.37□□□□□ -0.11
PDLIM5-203ENST00000359265 ATF6P18850 670 aa14.37□□□□□ -0.11
PDLIM5-203ENST00000359265 TNFRSF8P28908 595 aa14.37□□□□□ -0.11
PDLIM5-203ENST00000359265 ELF1P32519 619 aa14.37□□□□□ -0.11
PDLIM5-203ENST00000359265 ARL4AP40617 200 aa14.37□□□□□ -0.11
PDLIM5-203ENST00000359265 USP46P62068 366 aa14.37□□□□□ -0.11
PDLIM5-203ENST00000359265 SLC7A5Q01650 507 aa14.37□□□□□ -0.11
PDLIM5-203ENST00000359265 CCNG2Q16589 344 aa14.37□□□□□ -0.11
PDLIM5-203ENST00000359265 SCD5Q86SK9 330 aa14.37□□□□□ -0.11
PDLIM5-203ENST00000359265 IFT20Q8IY31 132 aa14.37□□□□□ -0.11
PDLIM5-203ENST00000359265 CCDC105Q8IYK2 499 aa14.37□□□□□ -0.11
PDLIM5-203ENST00000359265 STKLD1Q8NE28 680 aa14.37□□□□□ -0.11
PDLIM5-203ENST00000359265 SPPL3Q8TCT6 385 aa14.37□□□□□ -0.11
PDLIM5-203ENST00000359265 GPR152Q8TDT2 470 aa14.37□□□□□ -0.11
PDLIM5-203ENST00000359265 POF1BQ8WVV4 589 aa14.37□□□□□ -0.11
PDLIM5-203ENST00000359265 C1orf54Q8WWF1 131 aa14.37□□□□□ -0.11
PDLIM5-203ENST00000359265 AUTS2Q8WXX7 1259 aa14.37□□□□□ -0.11
PDLIM5-203ENST00000359265 ARNTL2Q8WYA1 636 aa14.37□□□□□ -0.11
PDLIM5-203ENST00000359265 TTLL2Q9BWV7 592 aa14.37□□□□□ -0.11
PDLIM5-203ENST00000359265 CYP4F11Q9HBI6 524 aa14.37□□□□□ -0.11
PDLIM5-203ENST00000359265 ALG13Q9NP73 1137 aaKnown RBP14.37□□□□□ -0.11
PDLIM5-203ENST00000359265 OLA1Q9NTK5 396 aaKnown RBP14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms