RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 GBP1P32455 592 aa15.47■□□□□ 0.07
CCNE1-202ENST00000357943 RDXP35241 583 aaKnown RBP15.47■□□□□ 0.07
CCNE1-202ENST00000357943 ARHGAP25P42331 645 aa15.47■□□□□ 0.07
CCNE1-202ENST00000357943 NNTQ13423 1086 aa15.47■□□□□ 0.07
CCNE1-202ENST00000357943 TRIP4Q15650 581 aaPredicted RBP15.47■□□□□ 0.07
CCNE1-202ENST00000357943 AAK1Q2M2I8 961 aa15.47■□□□□ 0.07
CCNE1-202ENST00000357943 ZC3H12AQ5D1E8 599 aaKnown RBP15.47■□□□□ 0.07
CCNE1-202ENST00000357943 STRADAQ7RTN6 431 aa15.47■□□□□ 0.07
CCNE1-202ENST00000357943 FAM131BQ86XD5 332 aa15.47■□□□□ 0.07
CCNE1-202ENST00000357943 CPNE8Q86YQ8 564 aa15.47■□□□□ 0.07
CCNE1-202ENST00000357943 TXLNBQ8N3L3 684 aa15.47■□□□□ 0.07
CCNE1-202ENST00000357943 ARFGAP1Q8N6T3 406 aa15.47■□□□□ 0.07
CCNE1-202ENST00000357943 SLC39A13Q96H72 371 aa15.47■□□□□ 0.07
CCNE1-202ENST00000357943 FCRL2Q96LA5 508 aaPredicted RBP15.47■□□□□ 0.07
CCNE1-202ENST00000357943 RPP25Q9BUL9 199 aaKnown RBP15.47■□□□□ 0.07
CCNE1-202ENST00000357943 CFAP97Q9P2B7 532 aa15.47■□□□□ 0.07
CCNE1-202ENST00000357943 IP6K2Q9UHH9 426 aa15.47■□□□□ 0.07
CCNE1-202ENST00000357943 HBS1LQ9Y450 684 aaKnown RBP15.47■□□□□ 0.07
CCNE1-202ENST00000357943 MACROD2A1Z1Q3 448 aa15.46■□□□□ 0.07
CCNE1-202ENST00000357943 GREM1O60565 184 aa15.46■□□□□ 0.07
CCNE1-202ENST00000357943 IGLV3-27P01718 113 aa15.46■□□□□ 0.07
CCNE1-202ENST00000357943 KLKB1P03952 638 aa15.46■□□□□ 0.07
CCNE1-202ENST00000357943 HADHBP55084 474 aaKnown RBP15.46■□□□□ 0.07
CCNE1-202ENST00000357943 MESDQ14696 234 aa15.46■□□□□ 0.07
CCNE1-202ENST00000357943 ZNF77Q15935 545 aa15.46■□□□□ 0.07
CCNE1-202ENST00000357943 CELF5Q8N6W0 485 aaKnown RBP15.46■□□□□ 0.07
CCNE1-202ENST00000357943 ATXN2LQ8WWM7 1075 aaKnown RBP15.46■□□□□ 0.07
CCNE1-202ENST00000357943 ZFP14Q9HCL3 533 aa15.46■□□□□ 0.07
CCNE1-202ENST00000357943 LZTFL1Q9NQ48 299 aa15.46■□□□□ 0.07
CCNE1-202ENST00000357943 PAXBP1Q9Y5B6 917 aa15.46■□□□□ 0.07
CCNE1-202ENST00000357943 TMEM110-MUSTN1A8MSY1 372 aa15.46■□□□□ 0.06
CCNE1-202ENST00000357943 HEPACAM2A8MVW5 462 aa15.46■□□□□ 0.06
CCNE1-202ENST00000357943 LRCH4O75427 683 aa15.46■□□□□ 0.06
CCNE1-202ENST00000357943 PROSCO94903 275 aa15.46■□□□□ 0.06
CCNE1-202ENST00000357943 F9P00740 461 aa15.46■□□□□ 0.06
CCNE1-202ENST00000357943 CXCR3P49682 368 aa15.46■□□□□ 0.06
CCNE1-202ENST00000357943 KPNA1P52294 538 aaPredicted RBP15.46■□□□□ 0.06
CCNE1-202ENST00000357943 NAP1L1P55209 391 aaKnown RBP15.46■□□□□ 0.06
CCNE1-202ENST00000357943 RING1Q06587 406 aa15.46■□□□□ 0.06
CCNE1-202ENST00000357943 USP4Q13107 963 aa15.46■□□□□ 0.06
CCNE1-202ENST00000357943 PIGHQ14442 188 aaPredicted RBP15.46■□□□□ 0.06
CCNE1-202ENST00000357943 VITQ6UXI7 678 aa15.46■□□□□ 0.06
CCNE1-202ENST00000357943 ZNF662Q6ZS27 426 aa15.46■□□□□ 0.06
CCNE1-202ENST00000357943 ZSCAN30Q86W11 494 aa15.46■□□□□ 0.06
CCNE1-202ENST00000357943 NIPA2Q8N8Q9 360 aa15.46■□□□□ 0.06
CCNE1-202ENST00000357943 RSAD2Q8WXG1 361 aa15.46■□□□□ 0.06
CCNE1-202ENST00000357943 RNF34Q969K3 372 aa15.46■□□□□ 0.06
CCNE1-202ENST00000357943 PLD4Q96BZ4 506 aa15.46■□□□□ 0.06
CCNE1-202ENST00000357943 KXD1Q9BQD3 176 aa15.46■□□□□ 0.06
CCNE1-202ENST00000357943 PLA2G2FQ9BZM2 168 aa15.46■□□□□ 0.06
CCNE1-202ENST00000357943 GOLPH3Q9H4A6 298 aa15.46■□□□□ 0.06
CCNE1-202ENST00000357943 KIF9Q9HAQ2 790 aa15.46■□□□□ 0.06
CCNE1-202ENST00000357943 ANLNQ9NQW6 1124 aa15.46■□□□□ 0.06
CCNE1-202ENST00000357943 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.46■□□□□ 0.06
CCNE1-202ENST00000357943 LIMD1Q9UGP4 676 aa15.46■□□□□ 0.06
CCNE1-202ENST00000357943 GUCA1BQ9UMX6 200 aa15.46■□□□□ 0.06
CCNE1-202ENST00000357943 ZKSCAN5Q9Y2L8 839 aa15.46■□□□□ 0.06
CCNE1-202ENST00000357943 NUMBLQ9Y6R0 609 aa15.46■□□□□ 0.06
CCNE1-202ENST00000357943 ANHXE9PGG2 379 aa15.45■□□□□ 0.06
CCNE1-202ENST00000357943 I6L893 689 aaPredicted RBP15.45■□□□□ 0.06
CCNE1-202ENST00000357943 KRT86O43790 486 aa15.45■□□□□ 0.06
CCNE1-202ENST00000357943 BUB1BO60566 1050 aaPredicted RBP15.45■□□□□ 0.06
CCNE1-202ENST00000357943 MOCS2O96007 188 aaPredicted RBP15.45■□□□□ 0.06
CCNE1-202ENST00000357943 TCF4P15884 667 aa15.45■□□□□ 0.06
CCNE1-202ENST00000357943 TCF3P15923 654 aa15.45■□□□□ 0.06
CCNE1-202ENST00000357943 CORO1AP31146 461 aaKnown RBP15.45■□□□□ 0.06
CCNE1-202ENST00000357943 CCR1P32246 355 aa15.45■□□□□ 0.06
CCNE1-202ENST00000357943 HTR4Q13639 388 aa15.45■□□□□ 0.06
CCNE1-202ENST00000357943 ACAP1Q15027 740 aa15.45■□□□□ 0.06
CCNE1-202ENST00000357943 DDX42Q86XP3 938 aaKnown RBP eCLIP15.45■□□□□ 0.06
CCNE1-202ENST00000357943 DENND1CQ8IV53 801 aa15.45■□□□□ 0.06
CCNE1-202ENST00000357943 REXO1L1PQ8IX06 675 aa15.45■□□□□ 0.06
CCNE1-202ENST00000357943 PLCD3Q8N3E9 789 aa15.45■□□□□ 0.06
CCNE1-202ENST00000357943 TPCN2Q8NHX9 752 aa15.45■□□□□ 0.06
CCNE1-202ENST00000357943 BPIFB1Q8TDL5 484 aa15.45■□□□□ 0.06
CCNE1-202ENST00000357943 ELSPBP1Q96BH3 223 aa15.45■□□□□ 0.06
CCNE1-202ENST00000357943 ASB2Q96Q27 587 aa15.45■□□□□ 0.06
CCNE1-202ENST00000357943 TSGA10Q9BZW7 698 aa15.45■□□□□ 0.06
CCNE1-202ENST00000357943 TKTL2Q9H0I9 626 aa15.45■□□□□ 0.06
CCNE1-202ENST00000357943 WDCPQ9H6R7 721 aa15.45■□□□□ 0.06
CCNE1-202ENST00000357943 TMPRSS4Q9NRS4 437 aa15.45■□□□□ 0.06
CCNE1-202ENST00000357943 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.45■□□□□ 0.06
CCNE1-202ENST00000357943 TRMT1Q9NXH9 659 aaKnown RBP15.45■□□□□ 0.06
CCNE1-202ENST00000357943 XPO7Q9UIA9 1087 aaKnown RBP15.45■□□□□ 0.06
CCNE1-202ENST00000357943 SH3BP1Q9Y3L3 701 aa15.45■□□□□ 0.06
CCNE1-202ENST00000357943 USP27XA6NNY8 438 aa15.44■□□□□ 0.06
CCNE1-202ENST00000357943 KCNU1A8MYU2 1149 aa15.44■□□□□ 0.06
CCNE1-202ENST00000357943 LOC730098B7Z3J9 87 aa15.44■□□□□ 0.06
CCNE1-202ENST00000357943 RNF8O76064 485 aa15.44■□□□□ 0.06
CCNE1-202ENST00000357943 MOCS3O95396 460 aa15.44■□□□□ 0.06
CCNE1-202ENST00000357943 DESP17661 470 aa15.44■□□□□ 0.06
CCNE1-202ENST00000357943 MIPP30301 263 aa15.44■□□□□ 0.06
CCNE1-202ENST00000357943 HARS2P49590 506 aaKnown RBP15.44■□□□□ 0.06
CCNE1-202ENST00000357943 ZP2Q05996 745 aa15.44■□□□□ 0.06
CCNE1-202ENST00000357943 PPP2R5DQ14738 602 aa15.44■□□□□ 0.06
CCNE1-202ENST00000357943 ARHGAP29Q52LW3 1261 aa15.44■□□□□ 0.06
CCNE1-202ENST00000357943 NUGGCQ68CJ6 796 aa15.44■□□□□ 0.06
CCNE1-202ENST00000357943 SCYL2Q6P3W7 929 aa15.44■□□□□ 0.06
CCNE1-202ENST00000357943 HTR3DQ70Z44 454 aa15.44■□□□□ 0.06
CCNE1-202ENST00000357943 MTSS1LQ765P7 747 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms