RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 DNAJC28Q9NX36 388 aa18.29■□□□□ 0.52
RTN4-204ENST00000357732 HMGXB4Q9UGU5 601 aa18.29■□□□□ 0.52
RTN4-204ENST00000357732 AFG3L2Q9Y4W6 797 aa18.29■□□□□ 0.52
RTN4-204ENST00000357732 A0A088AWK7 358 aa18.28■□□□□ 0.52
RTN4-204ENST00000357732 CYB561D2O14569 222 aa18.28■□□□□ 0.52
RTN4-204ENST00000357732 NFICP08651 508 aa18.28■□□□□ 0.52
RTN4-204ENST00000357732 ALOX15P16050 662 aaPredicted RBP18.28■□□□□ 0.52
RTN4-204ENST00000357732 SDC4P31431 198 aa18.28■□□□□ 0.52
RTN4-204ENST00000357732 BTKQ06187 659 aa18.28■□□□□ 0.52
RTN4-204ENST00000357732 FAM187BQ17R55 369 aa18.28■□□□□ 0.52
RTN4-204ENST00000357732 C15orf59Q2T9L4 293 aaPredicted RBP18.28■□□□□ 0.52
RTN4-204ENST00000357732 FASTKD1Q53R41 847 aaKnown RBP18.28■□□□□ 0.52
RTN4-204ENST00000357732 SH3PXD2AQ5TCZ1 1133 aa18.28■□□□□ 0.52
RTN4-204ENST00000357732 ACAD11Q709F0 780 aa18.28■□□□□ 0.52
RTN4-204ENST00000357732 FBXO27Q8NI29 283 aa18.28■□□□□ 0.52
RTN4-204ENST00000357732 FAM172AQ8WUF8 416 aa18.28■□□□□ 0.52
RTN4-204ENST00000357732 NAT9Q9BTE0 207 aa18.28■□□□□ 0.52
RTN4-204ENST00000357732 S100A14Q9HCY8 104 aa18.28■□□□□ 0.52
RTN4-204ENST00000357732 MORF4L1Q9UBU8 362 aa18.28■□□□□ 0.52
RTN4-204ENST00000357732 CCDC195A0A1B0GUA6 201 aa18.28■□□□□ 0.52
RTN4-204ENST00000357732 ZBTB42B2RXF5 422 aa18.28■□□□□ 0.52
RTN4-204ENST00000357732 CDC16Q13042 620 aa18.28■□□□□ 0.52
RTN4-204ENST00000357732 DYNC1I2Q13409 638 aaKnown RBP18.28■□□□□ 0.52
RTN4-204ENST00000357732 TUBB3Q13509 450 aa18.28■□□□□ 0.52
RTN4-204ENST00000357732 TMEM132AQ24JP5 1023 aa18.28■□□□□ 0.52
RTN4-204ENST00000357732 MROH9Q5TGP6 573 aa18.28■□□□□ 0.52
RTN4-204ENST00000357732 PIP4K2CQ8TBX8 421 aa18.28■□□□□ 0.52
RTN4-204ENST00000357732 NLRP4Q96MN2 994 aa18.28■□□□□ 0.52
RTN4-204ENST00000357732 OLFM3Q96PB7 478 aa18.28■□□□□ 0.52
RTN4-204ENST00000357732 NRDE2Q9H7Z3 1164 aa18.28■□□□□ 0.52
RTN4-204ENST00000357732 MAD1L1Q9Y6D9 718 aa18.28■□□□□ 0.52
RTN4-204ENST00000357732 MGAMO43451 1857 aa18.27■□□□□ 0.52
RTN4-204ENST00000357732 ANKRD33BA6NCL7 494 aa18.27■□□□□ 0.52
RTN4-204ENST00000357732 INO80B-WBP1J3KQ70 363 aa18.27■□□□□ 0.52
RTN4-204ENST00000357732 UPP2O95045 317 aa18.27■□□□□ 0.52
RTN4-204ENST00000357732 SERPINE1P05121 402 aa18.27■□□□□ 0.52
RTN4-204ENST00000357732 FDFT1P37268 417 aa18.27■□□□□ 0.52
RTN4-204ENST00000357732 COPAP53621 1224 aa18.27■□□□□ 0.52
RTN4-204ENST00000357732 MBTD1Q05BQ5 628 aa18.27■□□□□ 0.52
RTN4-204ENST00000357732 DPYSL2Q16555 572 aa18.27■□□□□ 0.52
RTN4-204ENST00000357732 SYCP2LQ5T4T6 812 aa18.27■□□□□ 0.52
RTN4-204ENST00000357732 DHDDSQ86SQ9 333 aa18.27■□□□□ 0.52
RTN4-204ENST00000357732 NT5DC4Q86YG4 428 aa18.27■□□□□ 0.52
RTN4-204ENST00000357732 PPP4R1Q8TF05 950 aa18.27■□□□□ 0.52
RTN4-204ENST00000357732 CMTM5Q96DZ9 223 aa18.27■□□□□ 0.52
RTN4-204ENST00000357732 QKIQ96PU8 341 aaKnown RBP eCLIP18.27■□□□□ 0.522e-7■■■■■ 69
RTN4-204ENST00000357732 MPHOSPH6Q99547 160 aaKnown RBP18.27■□□□□ 0.52
RTN4-204ENST00000357732 SNRNP25Q9BV90 132 aaKnown RBP18.27■□□□□ 0.52
RTN4-204ENST00000357732 TRIM4Q9C037 500 aa18.27■□□□□ 0.52
RTN4-204ENST00000357732 INO80BQ9C086 356 aaPredicted RBP18.27■□□□□ 0.52
RTN4-204ENST00000357732 C20orf27Q9GZN8 174 aa18.27■□□□□ 0.52
RTN4-204ENST00000357732 MARCOQ9UEW3 520 aaPredicted RBP18.27■□□□□ 0.52
RTN4-204ENST00000357732 TSPAN16Q9UKR8 245 aa18.27■□□□□ 0.52
RTN4-204ENST00000357732 SLC4A7Q9Y6M7 1214 aa18.27■□□□□ 0.52
RTN4-204ENST00000357732 LACTBL1A8MY62 500 aa18.27■□□□□ 0.52
RTN4-204ENST00000357732 HACD1B0YJ81 288 aa18.27■□□□□ 0.52
RTN4-204ENST00000357732 BUD23O43709 281 aaKnown RBP18.27■□□□□ 0.52
RTN4-204ENST00000357732 UGT1A9O60656 530 aa18.27■□□□□ 0.52
RTN4-204ENST00000357732 GSRP00390 522 aa18.27■□□□□ 0.52
RTN4-204ENST00000357732 KITP10721 976 aa18.27■□□□□ 0.52
RTN4-204ENST00000357732 PRDX6P30041 224 aa18.27■□□□□ 0.52
RTN4-204ENST00000357732 OSTNP61366 133 aa18.27■□□□□ 0.52
RTN4-204ENST00000357732 DALRD3Q5D0E6 543 aaKnown RBP18.27■□□□□ 0.52
RTN4-204ENST00000357732 SH3D19Q5HYK7 790 aa18.27■□□□□ 0.52
RTN4-204ENST00000357732 EEF1DP3Q658K8 133 aa18.27■□□□□ 0.52
RTN4-204ENST00000357732 TRMT10BQ6PF06 316 aaKnown RBP18.27■□□□□ 0.52
RTN4-204ENST00000357732 OLFML1Q6UWY5 402 aa18.27■□□□□ 0.52
RTN4-204ENST00000357732 LRRC71Q8N4P6 559 aa18.27■□□□□ 0.52
RTN4-204ENST00000357732 ACTRT2Q8TDY3 377 aa18.27■□□□□ 0.52
RTN4-204ENST00000357732 ZNF668Q96K58 619 aaPredicted RBP18.27■□□□□ 0.52
RTN4-204ENST00000357732 CENPKQ9BS16 269 aa18.27■□□□□ 0.52
RTN4-204ENST00000357732 NT5C1AQ9BXI3 368 aa18.27■□□□□ 0.52
RTN4-204ENST00000357732 UGT1A7Q9HAW7 530 aa18.27■□□□□ 0.52
RTN4-204ENST00000357732 UGT1A10Q9HAW8 530 aa18.27■□□□□ 0.52
RTN4-204ENST00000357732 UGT1A8Q9HAW9 530 aa18.27■□□□□ 0.52
RTN4-204ENST00000357732 EIF2B3Q9NR50 452 aaKnown RBP18.27■□□□□ 0.52
RTN4-204ENST00000357732 A0A0G2JMZ2 1700 aa18.27■□□□□ 0.52
RTN4-204ENST00000357732 LRRC37A2A6NM11 1700 aa18.27■□□□□ 0.52
RTN4-204ENST00000357732 CCDC130P13994 396 aa18.26■□□□□ 0.51
RTN4-204ENST00000357732 SLC1A6P48664 564 aa18.26■□□□□ 0.51
RTN4-204ENST00000357732 NIPAL4Q0D2K0 466 aa18.26■□□□□ 0.51
RTN4-204ENST00000357732 PRKG1Q13976 671 aa18.26■□□□□ 0.51
RTN4-204ENST00000357732 CDO1Q16878 200 aa18.26■□□□□ 0.51
RTN4-204ENST00000357732 TEDDM1Q5T9Z0 273 aa18.26■□□□□ 0.51
RTN4-204ENST00000357732 MAP3K21Q5TCX8 1036 aa18.26■□□□□ 0.51
RTN4-204ENST00000357732 FAXCQ5TGI0 409 aa18.26■□□□□ 0.51
RTN4-204ENST00000357732 FOXB2Q5VYV0 432 aa18.26■□□□□ 0.51
RTN4-204ENST00000357732 JADE1Q6IE81 842 aa18.26■□□□□ 0.51
RTN4-204ENST00000357732 EEPD1Q7L9B9 569 aa18.26■□□□□ 0.51
RTN4-204ENST00000357732 TMEM130Q8N3G9 435 aa18.26■□□□□ 0.51
RTN4-204ENST00000357732 CCDC33Q8N5R6 958 aa18.26■□□□□ 0.51
RTN4-204ENST00000357732 UBA3Q8TBC4 463 aa18.26■□□□□ 0.51
RTN4-204ENST00000357732 AZIN2Q96A70 460 aa18.26■□□□□ 0.51
RTN4-204ENST00000357732 KLRG1Q96E93 195 aa18.26■□□□□ 0.51
RTN4-204ENST00000357732 HPDLQ96IR7 371 aa18.26■□□□□ 0.51
RTN4-204ENST00000357732 SCN4AP35499 1836 aa18.26■□□□□ 0.51
RTN4-204ENST00000357732 ZNF189O75820 626 aaPredicted RBP18.26■□□□□ 0.51
RTN4-204ENST00000357732 STAG3L1P0CL83 205 aa18.26■□□□□ 0.51
RTN4-204ENST00000357732 FGF3P11487 239 aaPredicted RBP18.26■□□□□ 0.51
RTN4-204ENST00000357732 SCNN1AP37088 669 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms