RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 CPNE1Q99829 537 aa12.06□□□□□ -0.48
COL9A1-202ENST00000357250 MTFR1LQ9H019 292 aa12.06□□□□□ -0.48
COL9A1-202ENST00000357250 KRCC1Q9NPI7 259 aaPredicted RBP12.06□□□□□ -0.48
COL9A1-202ENST00000357250 CHST12Q9NRB3 414 aa12.06□□□□□ -0.48
COL9A1-202ENST00000357250 UTP6Q9NYH9 597 aaKnown RBP12.06□□□□□ -0.48
COL9A1-202ENST00000357250 SPASTQ9UBP0 616 aa12.06□□□□□ -0.48
COL9A1-202ENST00000357250 CLCA2Q9UQC9 943 aa12.06□□□□□ -0.48
COL9A1-202ENST00000357250 SIK3Q9Y2K2 1263 aa12.06□□□□□ -0.48
COL9A1-202ENST00000357250 H3BQF6 201 aa12.06□□□□□ -0.48
COL9A1-202ENST00000357250 TRIM13O60858 407 aa12.06□□□□□ -0.48
COL9A1-202ENST00000357250 DGKIO75912 1065 aa12.06□□□□□ -0.48
COL9A1-202ENST00000357250 CYP2C18P33260 490 aa12.06□□□□□ -0.48
COL9A1-202ENST00000357250 DRG2P55039 364 aaKnown RBP12.06□□□□□ -0.48
COL9A1-202ENST00000357250 NAA20P61599 178 aa12.06□□□□□ -0.48
COL9A1-202ENST00000357250 YWHAZP63104 245 aaKnown RBP12.06□□□□□ -0.48
COL9A1-202ENST00000357250 ERVK-9P63128 1117 aa12.06□□□□□ -0.48
COL9A1-202ENST00000357250 PCBP1Q15365 356 aaKnown RBP eCLIP12.06□□□□□ -0.48
COL9A1-202ENST00000357250 C9orf131Q5VYM1 1079 aa12.06□□□□□ -0.48
COL9A1-202ENST00000357250 ZFP1Q6P2D0 407 aa12.06□□□□□ -0.48
COL9A1-202ENST00000357250 LAYNQ6UX15 382 aa12.06□□□□□ -0.48
COL9A1-202ENST00000357250 GPR141Q7Z602 305 aa12.06□□□□□ -0.48
COL9A1-202ENST00000357250 PALB2Q86YC2 1186 aa12.06□□□□□ -0.48
COL9A1-202ENST00000357250 MREGQ8N565 214 aa12.06□□□□□ -0.48
COL9A1-202ENST00000357250 ZCCHC9Q8N567 271 aaKnown RBP12.06□□□□□ -0.48
COL9A1-202ENST00000357250 KYQ8NBH2 561 aa12.06□□□□□ -0.48
COL9A1-202ENST00000357250 PRRG3Q9BZD7 231 aa12.06□□□□□ -0.48
COL9A1-202ENST00000357250 KLHL4Q9C0H6 718 aa12.06□□□□□ -0.48
COL9A1-202ENST00000357250 CAAP1Q9H8G2 361 aa12.06□□□□□ -0.48
COL9A1-202ENST00000357250 COPG1Q9Y678 874 aaKnown RBP12.06□□□□□ -0.48
COL9A1-202ENST00000357250 CYP3A7-CYP3A51PA0A087WV96 503 aa12.06□□□□□ -0.48
COL9A1-202ENST00000357250 C15orf38-AP3S2A0A0A6YYH1 394 aa12.06□□□□□ -0.48
COL9A1-202ENST00000357250 EML1O00423 815 aa12.06□□□□□ -0.48
COL9A1-202ENST00000357250 UBOX5O94941 541 aa12.06□□□□□ -0.48
COL9A1-202ENST00000357250 CYP3A7P24462 503 aa12.06□□□□□ -0.48
COL9A1-202ENST00000357250 TKTL1P51854 596 aa12.06□□□□□ -0.48
COL9A1-202ENST00000357250 ZNF844Q08AG5 666 aa12.06□□□□□ -0.48
COL9A1-202ENST00000357250 GLRA4Q5JXX5 417 aa12.06□□□□□ -0.48
COL9A1-202ENST00000357250 LRRC8DQ7L1W4 858 aa12.06□□□□□ -0.48
COL9A1-202ENST00000357250 ARPINQ7Z6K5 226 aa12.06□□□□□ -0.48
COL9A1-202ENST00000357250 MTDHQ86UE4 582 aaKnown RBP12.06□□□□□ -0.48
COL9A1-202ENST00000357250 CREG2Q8IUH2 290 aa12.06□□□□□ -0.48
COL9A1-202ENST00000357250 HS6ST3Q8IZP7 471 aa12.06□□□□□ -0.48
COL9A1-202ENST00000357250 SYT15Q9BQS2 421 aa12.06□□□□□ -0.48
COL9A1-202ENST00000357250 SLC7A5P2Q9GIP4 190 aa12.06□□□□□ -0.48
COL9A1-202ENST00000357250 SPACA6W5XKT8 324 aa12.06□□□□□ -0.48
COL9A1-202ENST00000357250 A0A087WZ62 844 aa12.06□□□□□ -0.48
COL9A1-202ENST00000357250 SERPIND1P05546 499 aa12.06□□□□□ -0.48
COL9A1-202ENST00000357250 SERPINF2P08697 491 aa12.06□□□□□ -0.48
COL9A1-202ENST00000357250 ALOX15P16050 662 aaPredicted RBP12.06□□□□□ -0.48
COL9A1-202ENST00000357250 ARRDC4Q8NCT1 418 aa12.06□□□□□ -0.48
COL9A1-202ENST00000357250 HTR3CQ8WXA8 447 aa12.06□□□□□ -0.48
COL9A1-202ENST00000357250 CASP10Q92851 521 aa12.06□□□□□ -0.48
COL9A1-202ENST00000357250 VPS50Q96JG6 964 aa12.06□□□□□ -0.48
COL9A1-202ENST00000357250 FDXACB1Q9BRP7 624 aaPredicted RBP12.06□□□□□ -0.48
COL9A1-202ENST00000357250 SCUBE2Q9NQ36 999 aa12.06□□□□□ -0.48
COL9A1-202ENST00000357250 TCF7L2Q9NQB0 619 aa12.06□□□□□ -0.48
COL9A1-202ENST00000357250 KLK14Q9P0G3 267 aa12.06□□□□□ -0.48
COL9A1-202ENST00000357250 DPP7Q9UHL4 492 aa12.06□□□□□ -0.48
COL9A1-202ENST00000357250 TSPAN16Q9UKR8 245 aa12.06□□□□□ -0.48
COL9A1-202ENST00000357250 SLIT3O75094 1523 aa12.06□□□□□ -0.48
COL9A1-202ENST00000357250 UBDO15205 165 aa12.05□□□□□ -0.48
COL9A1-202ENST00000357250 SKAP2O75563 359 aaPredicted RBP12.05□□□□□ -0.48
COL9A1-202ENST00000357250 IRF1P10914 325 aa12.05□□□□□ -0.48
COL9A1-202ENST00000357250 SERPINB1P30740 379 aa12.05□□□□□ -0.48
COL9A1-202ENST00000357250 RXRGP48443 463 aa12.05□□□□□ -0.48
COL9A1-202ENST00000357250 MSLNQ13421 630 aaPredicted RBP12.05□□□□□ -0.48
COL9A1-202ENST00000357250 MARC1Q5VT66 337 aa12.05□□□□□ -0.48
COL9A1-202ENST00000357250 UNC93AQ86WB7 457 aa12.05□□□□□ -0.48
COL9A1-202ENST00000357250 TTC30AQ86WT1 665 aa12.05□□□□□ -0.48
COL9A1-202ENST00000357250 REPS2Q8NFH8 660 aa12.05□□□□□ -0.48
COL9A1-202ENST00000357250 DIS3LQ8TF46 1054 aaKnown RBP12.05□□□□□ -0.48
COL9A1-202ENST00000357250 TATDN2Q93075 761 aa12.05□□□□□ -0.48
COL9A1-202ENST00000357250 CNBD2Q96M20 576 aa12.05□□□□□ -0.48
COL9A1-202ENST00000357250 FICDQ9BVA6 458 aa12.05□□□□□ -0.48
COL9A1-202ENST00000357250 SLC25A13Q9UJS0 675 aa12.05□□□□□ -0.48
COL9A1-202ENST00000357250 PAIP2BQ9ULR5 123 aaKnown RBP12.05□□□□□ -0.48
COL9A1-202ENST00000357250 ZNF711Q9Y462 761 aa12.05□□□□□ -0.48
COL9A1-202ENST00000357250 GAKO14976 1311 aa12.05□□□□□ -0.48
COL9A1-202ENST00000357250 UBTFL6P0CB48 400 aaPredicted RBP12.05□□□□□ -0.48
COL9A1-202ENST00000357250 RARAP10276 462 aa12.05□□□□□ -0.48
COL9A1-202ENST00000357250 RPL21P46778 160 aaKnown RBP12.05□□□□□ -0.48
COL9A1-202ENST00000357250 PURAQ00577 322 aaKnown RBP12.05□□□□□ -0.48
COL9A1-202ENST00000357250 NFYCQ13952 458 aa12.05□□□□□ -0.48
COL9A1-202ENST00000357250 ZNF284Q2VY69 593 aa12.05□□□□□ -0.48
COL9A1-202ENST00000357250 RETSATQ6NUM9 610 aa12.05□□□□□ -0.48
COL9A1-202ENST00000357250 CCDC60Q8IWA6 550 aaPredicted RBP12.05□□□□□ -0.48
COL9A1-202ENST00000357250 TDRD5Q8NAT2 981 aaKnown RBP12.05□□□□□ -0.48
COL9A1-202ENST00000357250 B4GALNT2Q8NHY0 566 aa12.05□□□□□ -0.48
COL9A1-202ENST00000357250 ZNF384Q8TF68 577 aa12.05□□□□□ -0.48
COL9A1-202ENST00000357250 SEPT8Q92599 483 aa12.05□□□□□ -0.48
COL9A1-202ENST00000357250 SERPINB11Q96P15 392 aa12.05□□□□□ -0.48
COL9A1-202ENST00000357250 TMEM245Q9H330 911 aa12.05□□□□□ -0.48
COL9A1-202ENST00000357250 NRDE2Q9H7Z3 1164 aa12.05□□□□□ -0.48
COL9A1-202ENST00000357250 ADM5C9JUS6 153 aa12.05□□□□□ -0.48
COL9A1-202ENST00000357250 SNUPNO95149 360 aaKnown RBP12.05□□□□□ -0.48
COL9A1-202ENST00000357250 KRT6AP02538 564 aa12.05□□□□□ -0.48
COL9A1-202ENST00000357250 KRT6BP04259 564 aa12.05□□□□□ -0.48
COL9A1-202ENST00000357250 RHOCP08134 193 aa12.05□□□□□ -0.48
COL9A1-202ENST00000357250 CXCL8P10145 99 aa12.05□□□□□ -0.48
COL9A1-202ENST00000357250 ELK3P41970 407 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms