RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 C15orf59Q2T9L4 293 aaPredicted RBP8.51□□□□□ -1.05
CDC42SE1-201ENST00000357235 RALGPS1Q5JS13 557 aa8.51□□□□□ -1.05
CDC42SE1-201ENST00000357235 TCHHL1Q5QJ38 904 aaPredicted RBP8.51□□□□□ -1.05
CDC42SE1-201ENST00000357235 LGSNQ5TDP6 509 aa8.51□□□□□ -1.05
CDC42SE1-201ENST00000357235 KLHDC10Q6PID8 442 aa8.51□□□□□ -1.05
CDC42SE1-201ENST00000357235 BBS5Q8N3I7 341 aa8.51□□□□□ -1.05
CDC42SE1-201ENST00000357235 SCAIQ8N9R8 606 aa8.51□□□□□ -1.05
CDC42SE1-201ENST00000357235 UBA3Q8TBC4 463 aa8.51□□□□□ -1.05
CDC42SE1-201ENST00000357235 SREK1Q8WXA9 508 aaKnown RBP8.51□□□□□ -1.05
CDC42SE1-201ENST00000357235 PPP1R16BQ96T49 567 aa8.51□□□□□ -1.05
CDC42SE1-201ENST00000357235 NIF3L1Q9GZT8 377 aa8.51□□□□□ -1.05
CDC42SE1-201ENST00000357235 EBF3Q9H4W6 596 aa8.51□□□□□ -1.05
CDC42SE1-201ENST00000357235 NGRNQ9NPE2 291 aaKnown RBP8.51□□□□□ -1.05
CDC42SE1-201ENST00000357235 ARHGEF4Q9NR80 690 aa8.51□□□□□ -1.05
CDC42SE1-201ENST00000357235 ZNF277Q9NRM2 450 aaPredicted RBP8.51□□□□□ -1.05
CDC42SE1-201ENST00000357235 TAGLN3Q9UI15 199 aa8.51□□□□□ -1.05
CDC42SE1-201ENST00000357235 FZD1Q9UP38 647 aa8.51□□□□□ -1.05
CDC42SE1-201ENST00000357235 FAM32AQ9Y421 112 aaKnown RBP8.51□□□□□ -1.05
CDC42SE1-201ENST00000357235 HBS1LQ9Y450 684 aaKnown RBP8.51□□□□□ -1.05
CDC42SE1-201ENST00000357235 NR2E3Q9Y5X4 410 aa8.51□□□□□ -1.05
CDC42SE1-201ENST00000357235 MYH9P35579 1960 aaKnown RBP8.51□□□□□ -1.05
CDC42SE1-201ENST00000357235 C3orf70A6NLC5 250 aaPredicted RBP8.51□□□□□ -1.05
CDC42SE1-201ENST00000357235 H0YCG3 227 aa8.51□□□□□ -1.05
CDC42SE1-201ENST00000357235 DKC1O60832 514 aaKnown RBP eCLIP8.51□□□□□ -1.05
CDC42SE1-201ENST00000357235 DNAJC6O75061 913 aa8.51□□□□□ -1.05
CDC42SE1-201ENST00000357235 ZBED1O96006 694 aa8.51□□□□□ -1.05
CDC42SE1-201ENST00000357235 ASS1P00966 412 aaKnown RBP8.51□□□□□ -1.05
CDC42SE1-201ENST00000357235 S100A1P23297 94 aa8.51□□□□□ -1.05
CDC42SE1-201ENST00000357235 ATXN3P54252 364 aaPredicted RBP8.51□□□□□ -1.05
CDC42SE1-201ENST00000357235 NAA20P61599 178 aa8.51□□□□□ -1.05
CDC42SE1-201ENST00000357235 RPL10AP62906 217 aaKnown RBP8.51□□□□□ -1.05
CDC42SE1-201ENST00000357235 CRADDP78560 199 aa8.51□□□□□ -1.05
CDC42SE1-201ENST00000357235 STX3Q13277 289 aa8.51□□□□□ -1.05
CDC42SE1-201ENST00000357235 HIC1Q14526 733 aa8.51□□□□□ -1.05
CDC42SE1-201ENST00000357235 KRT72Q14CN4 511 aa8.51□□□□□ -1.05
CDC42SE1-201ENST00000357235 GRAMD1BQ3KR37 738 aa8.51□□□□□ -1.05
CDC42SE1-201ENST00000357235 TRMT10BQ6PF06 316 aaKnown RBP8.51□□□□□ -1.05
CDC42SE1-201ENST00000357235 DENND5BQ6ZUT9 1274 aa8.51□□□□□ -1.05
CDC42SE1-201ENST00000357235 CROCCP3Q8IVE0 287 aa8.51□□□□□ -1.05
CDC42SE1-201ENST00000357235 CLIP3Q96DZ5 547 aa8.51□□□□□ -1.05
CDC42SE1-201ENST00000357235 PPP1R36Q96LQ0 422 aa8.51□□□□□ -1.05
CDC42SE1-201ENST00000357235 ADPGKQ9BRR6 497 aa8.51□□□□□ -1.05
CDC42SE1-201ENST00000357235 DHRS4Q9BTZ2 278 aa8.51□□□□□ -1.05
CDC42SE1-201ENST00000357235 NRDE2Q9H7Z3 1164 aa8.51□□□□□ -1.05
CDC42SE1-201ENST00000357235 SLC17A6Q9P2U8 582 aa8.51□□□□□ -1.05
CDC42SE1-201ENST00000357235 CYTH4Q9UIA0 394 aa8.51□□□□□ -1.05
CDC42SE1-201ENST00000357235 SYNPO2Q9UMS6 1093 aa8.51□□□□□ -1.05
CDC42SE1-201ENST00000357235 APOC4-APOC2K7ER74 178 aa8.5□□□□□ -1.05
CDC42SE1-201ENST00000357235 APOC2P02655 101 aa8.5□□□□□ -1.05
CDC42SE1-201ENST00000357235 COL6A2P12110 1019 aa8.5□□□□□ -1.05
CDC42SE1-201ENST00000357235 CPA3P15088 417 aa8.5□□□□□ -1.05
CDC42SE1-201ENST00000357235 OSBPP22059 807 aa8.5□□□□□ -1.05
CDC42SE1-201ENST00000357235 RBL1P28749 1068 aa8.5□□□□□ -1.05
CDC42SE1-201ENST00000357235 RPL5P46777 297 aaKnown RBP8.5□□□□□ -1.05
CDC42SE1-201ENST00000357235 SPIDRQ14159 915 aa8.5□□□□□ -1.05
CDC42SE1-201ENST00000357235 BCL2A1Q16548 175 aa8.5□□□□□ -1.05
CDC42SE1-201ENST00000357235 DUOXA2Q1HG44 320 aa8.5□□□□□ -1.05
CDC42SE1-201ENST00000357235 TRMT5Q32P41 509 aaKnown RBP8.5□□□□□ -1.05
CDC42SE1-201ENST00000357235 XKR3Q5GH77 459 aa8.5□□□□□ -1.05
CDC42SE1-201ENST00000357235 CES4AQ5XG92 561 aa8.5□□□□□ -1.05
CDC42SE1-201ENST00000357235 Q6ZNX1 250 aa8.5□□□□□ -1.05
CDC42SE1-201ENST00000357235 VSIG10LQ86VR7 867 aa8.5□□□□□ -1.05
CDC42SE1-201ENST00000357235 CHSY1Q86X52 802 aa8.5□□□□□ -1.05
CDC42SE1-201ENST00000357235 UNC5BQ8IZJ1 945 aa8.5□□□□□ -1.05
CDC42SE1-201ENST00000357235 PIP4K2CQ8TBX8 421 aa8.5□□□□□ -1.05
CDC42SE1-201ENST00000357235 DEPDC1BQ8WUY9 529 aa8.5□□□□□ -1.05
CDC42SE1-201ENST00000357235 ATXN7L3BQ96GX2 97 aa8.5□□□□□ -1.05
CDC42SE1-201ENST00000357235 OSBPL10Q9BXB5 764 aa8.5□□□□□ -1.05
CDC42SE1-201ENST00000357235 ZNF302Q9NR11 478 aa8.5□□□□□ -1.05
CDC42SE1-201ENST00000357235 KCNK4Q9NYG8 393 aa8.5□□□□□ -1.05
CDC42SE1-201ENST00000357235 MAGED2Q9UNF1 606 aaPredicted RBP8.5□□□□□ -1.05
CDC42SE1-201ENST00000357235 PLLPQ9Y342 182 aa8.5□□□□□ -1.05
CDC42SE1-201ENST00000357235 ARHGAP10A1A4S6 786 aa8.5□□□□□ -1.05
CDC42SE1-201ENST00000357235 M0QYV0 167 aa8.5□□□□□ -1.05
CDC42SE1-201ENST00000357235 CSDE1O75534 798 aaKnown RBP8.5□□□□□ -1.05
CDC42SE1-201ENST00000357235 TM7SF2O76062 418 aa8.5□□□□□ -1.05
CDC42SE1-201ENST00000357235 RGS20O76081 388 aa8.5□□□□□ -1.05
CDC42SE1-201ENST00000357235 TGDSO95455 350 aa8.5□□□□□ -1.05
CDC42SE1-201ENST00000357235 LSM8O95777 96 aaKnown RBP8.5□□□□□ -1.05
CDC42SE1-201ENST00000357235 PROCP04070 461 aa8.5□□□□□ -1.05
CDC42SE1-201ENST00000357235 ERBB2P04626 1255 aa8.5□□□□□ -1.05
CDC42SE1-201ENST00000357235 KCNA2P16389 499 aa8.5□□□□□ -1.05
CDC42SE1-201ENST00000357235 GMPRP36959 345 aa8.5□□□□□ -1.05
CDC42SE1-201ENST00000357235 MRPS5P82675 430 aaKnown RBP8.5□□□□□ -1.05
CDC42SE1-201ENST00000357235 LPIN1Q14693 890 aa8.5□□□□□ -1.05
CDC42SE1-201ENST00000357235 TRIP10Q15642 601 aa8.5□□□□□ -1.05
CDC42SE1-201ENST00000357235 HSF5Q4G112 596 aaPredicted RBP8.5□□□□□ -1.05
CDC42SE1-201ENST00000357235 RABGAP1LQ5R372 815 aa8.5□□□□□ -1.05
CDC42SE1-201ENST00000357235 OR6B2Q6IFH4 312 aa8.5□□□□□ -1.05
CDC42SE1-201ENST00000357235 LRRC71Q8N4P6 559 aa8.5□□□□□ -1.05
CDC42SE1-201ENST00000357235 NETO2Q8NC67 525 aa8.5□□□□□ -1.05
CDC42SE1-201ENST00000357235 NSUN6Q8TEA1 469 aaKnown RBP8.5□□□□□ -1.05
CDC42SE1-201ENST00000357235 VPS50Q96JG6 964 aa8.5□□□□□ -1.05
CDC42SE1-201ENST00000357235 TUT1Q9H6E5 874 aaKnown RBP8.5□□□□□ -1.05
CDC42SE1-201ENST00000357235 DNAJC16Q9Y2G8 782 aa8.5□□□□□ -1.05
CDC42SE1-201ENST00000357235 TRIM17Q9Y577 477 aa8.5□□□□□ -1.05
CDC42SE1-201ENST00000357235 TEX264Q9Y6I9 313 aa8.5□□□□□ -1.05
CDC42SE1-201ENST00000357235 CNTNAP2Q9UHC6 1331 aa8.5□□□□□ -1.05
CDC42SE1-201ENST00000357235 SCN9AQ15858 1988 aa8.49□□□□□ -1.05
CDC42SE1-201ENST00000357235 SH3PXD2BA1X283 911 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms