RNA–Protein interactions for RNA: ENST00000356948.10

PTBP1-203, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTBP1, Length 3,598 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-203ENST00000356948 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.77■□□□□ 0.12
PTBP1-203ENST00000356948 FAM219BQ5XKK7 198 aa15.77■□□□□ 0.12
PTBP1-203ENST00000356948 MAB21L3Q8N8X9 362 aa15.77■□□□□ 0.12
PTBP1-203ENST00000356948 AZIN2Q96A70 460 aa15.77■□□□□ 0.12
PTBP1-203ENST00000356948 SIGLEC10Q96LC7 697 aa15.77■□□□□ 0.12
PTBP1-203ENST00000356948 DDX50Q9BQ39 737 aaKnown RBP15.77■□□□□ 0.12
PTBP1-203ENST00000356948 C2orf40Q9H1Z8 148 aa15.77■□□□□ 0.12
PTBP1-203ENST00000356948 NMRK1Q9NWW6 199 aa15.77■□□□□ 0.12
PTBP1-203ENST00000356948 RHBDL2Q9NX52 303 aa15.77■□□□□ 0.12
PTBP1-203ENST00000356948 MTMR10Q9NXD2 777 aa15.77■□□□□ 0.12
PTBP1-203ENST00000356948 PLLPQ9Y342 182 aa15.77■□□□□ 0.12
PTBP1-203ENST00000356948 WDR90Q96KV7 1748 aa15.77■□□□□ 0.12
PTBP1-203ENST00000356948 USP1O94782 785 aa15.77■□□□□ 0.12
PTBP1-203ENST00000356948 LGALS2P05162 132 aa15.77■□□□□ 0.12
PTBP1-203ENST00000356948 RPL10AP62906 217 aaKnown RBP15.77■□□□□ 0.12
PTBP1-203ENST00000356948 THOC5Q13769 683 aaKnown RBP15.77■□□□□ 0.12
PTBP1-203ENST00000356948 CEP128Q6ZU80 1094 aa15.77■□□□□ 0.12
PTBP1-203ENST00000356948 PLPPR4Q7Z2D5 763 aa15.77■□□□□ 0.12
PTBP1-203ENST00000356948 PHC3Q8NDX5 983 aa15.77■□□□□ 0.12
PTBP1-203ENST00000356948 OR6B3Q8NGW1 331 aa15.77■□□□□ 0.12
PTBP1-203ENST00000356948 ABTB1Q969K4 478 aaPredicted RBP15.77■□□□□ 0.12
PTBP1-203ENST00000356948 NSL1Q96IY1 281 aa15.77■□□□□ 0.12
PTBP1-203ENST00000356948 ZNF778Q96MU6 729 aa15.77■□□□□ 0.12
PTBP1-203ENST00000356948 NT5C1AQ9BXI3 368 aa15.77■□□□□ 0.12
PTBP1-203ENST00000356948 OXCT2Q9BYC2 517 aaPredicted RBP15.77■□□□□ 0.12
PTBP1-203ENST00000356948 B2RBV5 119 aa15.77■□□□□ 0.11
PTBP1-203ENST00000356948 TSPAN1O60635 241 aa15.77■□□□□ 0.11
PTBP1-203ENST00000356948 PFDN1O60925 122 aa15.77■□□□□ 0.11
PTBP1-203ENST00000356948 UBTFL6P0CB48 400 aaPredicted RBP15.77■□□□□ 0.11
PTBP1-203ENST00000356948 ESRRAP11474 423 aaPredicted RBP15.77■□□□□ 0.11
PTBP1-203ENST00000356948 STIP1P31948 543 aaKnown RBP15.77■□□□□ 0.11
PTBP1-203ENST00000356948 TTLL12Q14166 644 aaPredicted RBP15.77■□□□□ 0.11
PTBP1-203ENST00000356948 ADAM32Q8TC27 787 aa15.77■□□□□ 0.11
PTBP1-203ENST00000356948 FAM167AQ96KS9 214 aa15.77■□□□□ 0.11
PTBP1-203ENST00000356948 IQCGQ9H095 443 aaKnown RBP15.77■□□□□ 0.11
PTBP1-203ENST00000356948 NRDE2Q9H7Z3 1164 aa15.77■□□□□ 0.11
PTBP1-203ENST00000356948 PRR5-ARHGAP8B1AHC4 643 aa15.76■□□□□ 0.11
PTBP1-203ENST00000356948 CAPN9O14815 690 aa15.76■□□□□ 0.11
PTBP1-203ENST00000356948 ARHGAP8P85298 464 aa15.76■□□□□ 0.11
PTBP1-203ENST00000356948 KLC1Q07866 573 aa15.76■□□□□ 0.11
PTBP1-203ENST00000356948 SURF1Q15526 300 aa15.76■□□□□ 0.11
PTBP1-203ENST00000356948 LCLAT1Q6UWP7 414 aa15.76■□□□□ 0.11
PTBP1-203ENST00000356948 RSPH3Q86UC2 560 aa15.76■□□□□ 0.11
PTBP1-203ENST00000356948 PDCD7Q8N8D1 485 aaKnown RBP15.76■□□□□ 0.11
PTBP1-203ENST00000356948 RBM15BQ8NDT2 890 aaKnown RBP15.76■□□□□ 0.11
PTBP1-203ENST00000356948 AGR3Q8TD06 166 aa15.76■□□□□ 0.11
PTBP1-203ENST00000356948 SYT15Q9BQS2 421 aa15.76■□□□□ 0.11
PTBP1-203ENST00000356948 SEPT10Q9P0V9 454 aa15.76■□□□□ 0.11
PTBP1-203ENST00000356948 SCOCQ9UIL1 159 aa15.76■□□□□ 0.11
PTBP1-203ENST00000356948 PACSIN3Q9UKS6 424 aa15.76■□□□□ 0.11
PTBP1-203ENST00000356948 PTPRFP10586 1907 aa15.76■□□□□ 0.11
PTBP1-203ENST00000356948 KLHL33A6NCF5 533 aa15.76■□□□□ 0.11
PTBP1-203ENST00000356948 SPTLC1O15269 473 aa15.76■□□□□ 0.11
PTBP1-203ENST00000356948 SMNDC1O75940 238 aaKnown RBP eCLIP15.76■□□□□ 0.118e-7■■■□□ 16.3
PTBP1-203ENST00000356948 SDC4P31431 198 aa15.76■□□□□ 0.11
PTBP1-203ENST00000356948 L1CAMP32004 1257 aa15.76■□□□□ 0.11
PTBP1-203ENST00000356948 BAG6P46379 1132 aa15.76■□□□□ 0.11
PTBP1-203ENST00000356948 PPP1R2P3Q6NXS1 205 aa15.76■□□□□ 0.11
PTBP1-203ENST00000356948 ISLR2Q6UXK2 745 aa15.76■□□□□ 0.11
PTBP1-203ENST00000356948 VPS52Q8N1B4 723 aa15.76■□□□□ 0.11
PTBP1-203ENST00000356948 KCTD15Q96SI1 283 aaPredicted RBP15.76■□□□□ 0.11
PTBP1-203ENST00000356948 SMARCAD1Q9H4L7 1026 aa15.76■□□□□ 0.11
PTBP1-203ENST00000356948 WDR35Q9P2L0 1181 aa15.76■□□□□ 0.11
PTBP1-203ENST00000356948 CSADQ9Y600 493 aa15.76■□□□□ 0.11
PTBP1-203ENST00000356948 CLDN5O00501 218 aa15.76■□□□□ 0.11
PTBP1-203ENST00000356948 ZMPSTE24O75844 475 aa15.76■□□□□ 0.11
PTBP1-203ENST00000356948 BAG2O95816 211 aa15.76■□□□□ 0.11
PTBP1-203ENST00000356948 GSRP00390 522 aa15.76■□□□□ 0.11
PTBP1-203ENST00000356948 LINGO3P0C6S8 592 aa15.76■□□□□ 0.11
PTBP1-203ENST00000356948 NDUFV1P49821 464 aa15.76■□□□□ 0.11
PTBP1-203ENST00000356948 ARHGAP1Q07960 439 aa15.76■□□□□ 0.11
PTBP1-203ENST00000356948 KCTD2Q14681 263 aa15.76■□□□□ 0.11
PTBP1-203ENST00000356948 TTC39BQ5VTQ0 682 aaPredicted RBP15.76■□□□□ 0.11
PTBP1-203ENST00000356948 LENG1Q96BZ8 264 aaPredicted RBP15.76■□□□□ 0.11
PTBP1-203ENST00000356948 FAM161BQ96MY7 647 aa15.76■□□□□ 0.11
PTBP1-203ENST00000356948 TRAFD1O14545 582 aaPredicted RBP15.75■□□□□ 0.11
PTBP1-203ENST00000356948 CUL3Q13618 768 aa15.75■□□□□ 0.11
PTBP1-203ENST00000356948 DEPDC1BQ8WUY9 529 aa15.75■□□□□ 0.11
PTBP1-203ENST00000356948 RNF39Q9H2S5 420 aa15.75■□□□□ 0.11
PTBP1-203ENST00000356948 NXF3Q9H4D5 531 aaKnown RBP15.75■□□□□ 0.11
PTBP1-203ENST00000356948 SSU72Q9NP77 194 aaKnown RBP15.75■□□□□ 0.11
PTBP1-203ENST00000356948 HESX1Q9UBX0 185 aa15.75■□□□□ 0.11
PTBP1-203ENST00000356948 CHADO15335 359 aa15.75■□□□□ 0.11
PTBP1-203ENST00000356948 HBP1O60381 514 aa15.75■□□□□ 0.11
PTBP1-203ENST00000356948 BEST1O76090 585 aa15.75■□□□□ 0.11
PTBP1-203ENST00000356948 APOEP02649 317 aa15.75■□□□□ 0.11
PTBP1-203ENST00000356948 NOL9Q5SY16 702 aaKnown RBP15.75■□□□□ 0.11
PTBP1-203ENST00000356948 MAMDC4Q6UXC1 1216 aa15.75■□□□□ 0.11
PTBP1-203ENST00000356948 ARMCX2Q7L311 632 aa15.75■□□□□ 0.11
PTBP1-203ENST00000356948 NUDCD3Q8IVD9 361 aa15.75■□□□□ 0.11
PTBP1-203ENST00000356948 SLC35F5Q8WV83 523 aa15.75■□□□□ 0.11
PTBP1-203ENST00000356948 MCUR1Q96AQ8 359 aa15.75■□□□□ 0.11
PTBP1-203ENST00000356948 E2F7Q96AV8 911 aa15.75■□□□□ 0.11
PTBP1-203ENST00000356948 AGAP3Q96P47 875 aa15.75■□□□□ 0.11
PTBP1-203ENST00000356948 SETD4Q9NVD3 440 aa15.75■□□□□ 0.11
PTBP1-203ENST00000356948 DTLQ9NZJ0 730 aa15.75■□□□□ 0.11
PTBP1-203ENST00000356948 SH3BP1Q9Y3L3 701 aa15.75■□□□□ 0.11
PTBP1-203ENST00000356948 GOLGA8TH3BQL2 631 aa15.75■□□□□ 0.11
PTBP1-203ENST00000356948 CCDC22O60826 627 aa15.75■□□□□ 0.11
PTBP1-203ENST00000356948 IL18RAPO95256 599 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms