RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 PILRBQ9UKJ0 227 aa11.17□□□□□ -0.62
CAPN3-204ENST00000356316 SLC6A14Q9UN76 642 aa11.17□□□□□ -0.62
CAPN3-204ENST00000356316 NCOR2Q9Y618 2525 aa11.16□□□□□ -0.62
CAPN3-204ENST00000356316 PLXND1Q9Y4D7 1925 aa11.16□□□□□ -0.62
CAPN3-204ENST00000356316 CDX4O14627 284 aaPredicted RBP11.16□□□□□ -0.62
CAPN3-204ENST00000356316 PSMA7O14818 248 aa11.16□□□□□ -0.62
CAPN3-204ENST00000356316 XPO1O14980 1071 aaKnown RBP11.16□□□□□ -0.62
CAPN3-204ENST00000356316 TIMM44O43615 452 aa11.16□□□□□ -0.62
CAPN3-204ENST00000356316 SYNCRIPO60506 623 aaKnown RBP11.16□□□□□ -0.62
CAPN3-204ENST00000356316 KLKB1P03952 638 aa11.16□□□□□ -0.62
CAPN3-204ENST00000356316 VDRP11473 427 aa11.16□□□□□ -0.62
CAPN3-204ENST00000356316 GNSP15586 552 aa11.16□□□□□ -0.62
CAPN3-204ENST00000356316 ENGP17813 658 aa11.16□□□□□ -0.62
CAPN3-204ENST00000356316 NDUFV2P19404 249 aa11.16□□□□□ -0.62
CAPN3-204ENST00000356316 CSRP1P21291 193 aaKnown RBP11.16□□□□□ -0.62
CAPN3-204ENST00000356316 PMLP29590 882 aa11.16□□□□□ -0.62
CAPN3-204ENST00000356316 PPP1R2P41236 205 aa11.16□□□□□ -0.62
CAPN3-204ENST00000356316 BCAT1P54687 386 aa11.16□□□□□ -0.62
CAPN3-204ENST00000356316 SHC2P98077 582 aa11.16□□□□□ -0.62
CAPN3-204ENST00000356316 BST2Q10589 180 aaKnown RBP11.16□□□□□ -0.62
CAPN3-204ENST00000356316 LRMPQ12912 555 aa11.16□□□□□ -0.62
CAPN3-204ENST00000356316 GOLGA7BQ2TAP0 167 aa11.16□□□□□ -0.62
CAPN3-204ENST00000356316 CBWD6Q4V339 395 aa11.16□□□□□ -0.62
CAPN3-204ENST00000356316 MPPE1Q53F39 396 aa11.16□□□□□ -0.62
CAPN3-204ENST00000356316 COBLL1Q53SF7 1204 aa11.16□□□□□ -0.62
CAPN3-204ENST00000356316 RAB41Q5JT25 222 aa11.16□□□□□ -0.62
CAPN3-204ENST00000356316 CBWD3Q5JTY5 395 aa11.16□□□□□ -0.62
CAPN3-204ENST00000356316 CBWD5Q5RIA9 395 aa11.16□□□□□ -0.62
CAPN3-204ENST00000356316 PM20D1Q6GTS8 502 aa11.16□□□□□ -0.62
CAPN3-204ENST00000356316 KIAA1211LQ6NV74 962 aa11.16□□□□□ -0.62
CAPN3-204ENST00000356316 KIAA1324Q6UXG2 1013 aaKnown RBP11.16□□□□□ -0.62
CAPN3-204ENST00000356316 PLD4Q96BZ4 506 aa11.16□□□□□ -0.62
CAPN3-204ENST00000356316 TIGD1Q96MW7 591 aa11.16□□□□□ -0.62
CAPN3-204ENST00000356316 GABRG3Q99928 467 aa11.16□□□□□ -0.62
CAPN3-204ENST00000356316 GTPBP2Q9BX10 602 aaKnown RBP11.16□□□□□ -0.62
CAPN3-204ENST00000356316 TMEM121BQ9BXQ6 578 aaPredicted RBP11.16□□□□□ -0.62
CAPN3-204ENST00000356316 PRDM16Q9HAZ2 1276 aa11.16□□□□□ -0.62
CAPN3-204ENST00000356316 TSPAN16Q9UKR8 245 aa11.16□□□□□ -0.62
CAPN3-204ENST00000356316 AGO1Q9UL18 857 aaKnown RBP11.16□□□□□ -0.62
CAPN3-204ENST00000356316 CYP8B1Q9UNU6 501 aa11.16□□□□□ -0.62
CAPN3-204ENST00000356316 SLC27A6Q9Y2P4 619 aa11.16□□□□□ -0.62
CAPN3-204ENST00000356316 COQ4Q9Y3A0 265 aa11.16□□□□□ -0.62
CAPN3-204ENST00000356316 RAD54BQ9Y620 910 aa11.16□□□□□ -0.62
CAPN3-204ENST00000356316 STON1Q9Y6Q2 735 aa11.16□□□□□ -0.62
CAPN3-204ENST00000356316 ATXN2Q99700 1313 aaKnown RBP11.15□□□□□ -0.62
CAPN3-204ENST00000356316 IGHV1OR15-9A0A0B4J2B8 117 aa11.15□□□□□ -0.62
CAPN3-204ENST00000356316 WASH3PC4AMC7 463 aa11.15□□□□□ -0.62
CAPN3-204ENST00000356316 PENKP01210 267 aaPredicted RBP11.15□□□□□ -0.62
CAPN3-204ENST00000356316 SYPP08247 313 aa11.15□□□□□ -0.62
CAPN3-204ENST00000356316 SERPINF2P08697 491 aa11.15□□□□□ -0.62
CAPN3-204ENST00000356316 ACADMP11310 421 aa11.15□□□□□ -0.62
CAPN3-204ENST00000356316 RDXP35241 583 aaKnown RBP11.15□□□□□ -0.62
CAPN3-204ENST00000356316 MFAP3P55082 362 aa11.15□□□□□ -0.62
CAPN3-204ENST00000356316 PDE4CQ08493 712 aa11.15□□□□□ -0.62
CAPN3-204ENST00000356316 ZNF252P-AS1Q0IIN9 211 aa11.15□□□□□ -0.62
CAPN3-204ENST00000356316 CCDC40Q4G0X9 1142 aa11.15□□□□□ -0.62
CAPN3-204ENST00000356316 WDR45BQ5MNZ6 344 aa11.15□□□□□ -0.62
CAPN3-204ENST00000356316 FYB2Q5VWT5 728 aa11.15□□□□□ -0.62
CAPN3-204ENST00000356316 ANKS1BQ7Z6G8 1248 aa11.15□□□□□ -0.62
CAPN3-204ENST00000356316 CPXM2Q8N436 756 aa11.15□□□□□ -0.62
CAPN3-204ENST00000356316 TRIML1Q8N9V2 468 aa11.15□□□□□ -0.62
CAPN3-204ENST00000356316 UBA3Q8TBC4 463 aa11.15□□□□□ -0.62
CAPN3-204ENST00000356316 GOLGA1Q92805 767 aa11.15□□□□□ -0.62
CAPN3-204ENST00000356316 FOXJ1Q92949 421 aa11.15□□□□□ -0.62
CAPN3-204ENST00000356316 DHTKD1Q96HY7 919 aaPredicted RBP11.15□□□□□ -0.62
CAPN3-204ENST00000356316 MRGPRX1Q96LB2 322 aa11.15□□□□□ -0.62
CAPN3-204ENST00000356316 SLC2A11Q9BYW1 496 aa11.15□□□□□ -0.62
CAPN3-204ENST00000356316 ULBP1Q9BZM6 244 aa11.15□□□□□ -0.62
CAPN3-204ENST00000356316 CIPCQ9C0C6 399 aa11.15□□□□□ -0.62
CAPN3-204ENST00000356316 ABCC13Q9NSE7 274 aa11.15□□□□□ -0.62
CAPN3-204ENST00000356316 ELOVL2Q9NXB9 296 aa11.15□□□□□ -0.62
CAPN3-204ENST00000356316 FBXO10Q9UK96 956 aa11.15□□□□□ -0.62
CAPN3-204ENST00000356316 HCN2Q9UL51 889 aa11.15□□□□□ -0.62
CAPN3-204ENST00000356316 PLA2G4CQ9UP65 541 aa11.15□□□□□ -0.62
CAPN3-204ENST00000356316 HBS1LQ9Y450 684 aaKnown RBP11.15□□□□□ -0.62
CAPN3-204ENST00000356316 GTF3C3Q9Y5Q9 886 aa11.15□□□□□ -0.62
CAPN3-204ENST00000356316 TNRC6BQ9UPQ9 1833 aaKnown RBP11.14□□□□□ -0.63
CAPN3-204ENST00000356316 GIPC1O14908 333 aa11.14□□□□□ -0.63
CAPN3-204ENST00000356316 SETSIPP0DME0 302 aa11.14□□□□□ -0.63
CAPN3-204ENST00000356316 LCP1P13796 627 aa11.14□□□□□ -0.63
CAPN3-204ENST00000356316 OXTRP30559 389 aa11.14□□□□□ -0.63
CAPN3-204ENST00000356316 ZNF445P59923 1031 aa11.14□□□□□ -0.63
CAPN3-204ENST00000356316 ADIGQ0VDE8 80 aa11.14□□□□□ -0.63
CAPN3-204ENST00000356316 FOXC1Q12948 553 aa11.14□□□□□ -0.63
CAPN3-204ENST00000356316 EIF4HQ15056 248 aaKnown RBP11.14□□□□□ -0.63
CAPN3-204ENST00000356316 GEN1Q17RS7 908 aa11.14□□□□□ -0.63
CAPN3-204ENST00000356316 BSPRYQ5W0U4 402 aa11.14□□□□□ -0.63
CAPN3-204ENST00000356316 ISM2Q6H9L7 571 aa11.14□□□□□ -0.63
CAPN3-204ENST00000356316 TMEM270Q6UE05 265 aa11.14□□□□□ -0.63
CAPN3-204ENST00000356316 FMNL3Q8IVF7 1028 aa11.14□□□□□ -0.63
CAPN3-204ENST00000356316 PPM1KQ8N3J5 372 aa11.14□□□□□ -0.63
CAPN3-204ENST00000356316 KCTD13Q8WZ19 329 aa11.14□□□□□ -0.63
CAPN3-204ENST00000356316 NDRG1Q92597 394 aaKnown RBP11.14□□□□□ -0.63
CAPN3-204ENST00000356316 EDEM1Q92611 657 aa11.14□□□□□ -0.63
CAPN3-204ENST00000356316 PRCCQ92733 491 aaPredicted RBP11.14□□□□□ -0.63
CAPN3-204ENST00000356316 TMA16Q96EY4 203 aaKnown RBP11.14□□□□□ -0.63
CAPN3-204ENST00000356316 ZNF419Q96HQ0 510 aaPredicted RBP11.14□□□□□ -0.63
CAPN3-204ENST00000356316 HSPA12BQ96MM6 686 aa11.14□□□□□ -0.63
CAPN3-204ENST00000356316 CEP63Q96MT8 703 aa11.14□□□□□ -0.63
CAPN3-204ENST00000356316 NT5C1BQ96P26 610 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms